Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12540 and CA264_12545 are separated by 51 nucleotides CA264_12545 and CA264_12550 are separated by 137 nucleotides
CA264_12540: CA264_12540 - glycoside hydrolase, at 2,922,726 to 2,923,592
_12540
CA264_12545: CA264_12545 - beta-glucosidase, at 2,923,644 to 2,926,004
_12545
CA264_12550: CA264_12550 - hypothetical protein, at 2,926,142 to 2,929,075
_12550
Position (kb)
2923
2924
2925
2926
2927 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2922.666 kb on + strand at 2922.666 kb on + strand at 2922.680 kb on + strand at 2922.680 kb on + strand at 2922.719 kb on + strand at 2922.719 kb on + strand at 2922.719 kb on + strand at 2922.720 kb on - strand at 2922.720 kb on - strand at 2922.720 kb on - strand at 2922.723 kb on + strand at 2922.723 kb on + strand at 2922.724 kb on - strand at 2922.724 kb on - strand at 2922.724 kb on - strand at 2922.724 kb on - strand at 2922.724 kb on - strand at 2922.726 kb on - strand at 2922.726 kb on - strand at 2922.731 kb on + strand at 2922.737 kb on - strand at 2922.737 kb on - strand at 2922.738 kb on + strand at 2922.738 kb on + strand at 2922.738 kb on + strand at 2922.739 kb on - strand at 2922.783 kb on - strand at 2922.837 kb on - strand, within CA264_12540 at 2922.975 kb on + strand, within CA264_12540 at 2922.975 kb on + strand, within CA264_12540 at 2923.006 kb on + strand, within CA264_12540 at 2923.007 kb on - strand, within CA264_12540 at 2923.064 kb on + strand, within CA264_12540 at 2923.219 kb on + strand, within CA264_12540 at 2923.219 kb on + strand, within CA264_12540 at 2923.284 kb on + strand, within CA264_12540 at 2923.285 kb on - strand, within CA264_12540 at 2923.285 kb on - strand, within CA264_12540 at 2923.325 kb on + strand, within CA264_12540 at 2923.325 kb on + strand, within CA264_12540 at 2923.328 kb on - strand, within CA264_12540 at 2923.331 kb on + strand, within CA264_12540 at 2923.331 kb on + strand, within CA264_12540 at 2923.338 kb on - strand, within CA264_12540 at 2923.397 kb on - strand, within CA264_12540 at 2923.420 kb on - strand, within CA264_12540 at 2923.555 kb on + strand at 2923.555 kb on + strand at 2923.560 kb on + strand at 2923.560 kb on + strand at 2923.560 kb on + strand at 2923.560 kb on + strand at 2923.561 kb on - strand at 2923.573 kb on - strand at 2923.590 kb on + strand at 2923.612 kb on + strand at 2923.612 kb on + strand at 2923.613 kb on - strand at 2923.613 kb on - strand at 2923.631 kb on + strand at 2923.634 kb on - strand at 2923.838 kb on - strand at 2923.933 kb on - strand, within CA264_12545 at 2924.105 kb on + strand, within CA264_12545 at 2924.106 kb on - strand, within CA264_12545 at 2924.106 kb on - strand, within CA264_12545 at 2924.182 kb on - strand, within CA264_12545 at 2924.318 kb on - strand, within CA264_12545 at 2924.477 kb on + strand, within CA264_12545 at 2924.511 kb on - strand, within CA264_12545 at 2924.511 kb on - strand, within CA264_12545 at 2924.530 kb on + strand, within CA264_12545 at 2924.530 kb on + strand, within CA264_12545 at 2924.598 kb on - strand, within CA264_12545 at 2924.598 kb on - strand, within CA264_12545 at 2924.605 kb on + strand, within CA264_12545 at 2924.611 kb on + strand, within CA264_12545 at 2924.708 kb on + strand, within CA264_12545 at 2924.708 kb on + strand, within CA264_12545 at 2924.794 kb on + strand, within CA264_12545 at 2924.825 kb on - strand, within CA264_12545 at 2924.874 kb on + strand, within CA264_12545 at 2925.046 kb on - strand, within CA264_12545 at 2925.046 kb on - strand, within CA264_12545 at 2925.087 kb on + strand, within CA264_12545 at 2925.087 kb on + strand, within CA264_12545 at 2925.088 kb on - strand, within CA264_12545 at 2925.088 kb on - strand, within CA264_12545 at 2925.138 kb on - strand, within CA264_12545 at 2925.141 kb on + strand, within CA264_12545 at 2925.160 kb on - strand, within CA264_12545 at 2925.202 kb on + strand, within CA264_12545 at 2925.203 kb on - strand, within CA264_12545 at 2925.291 kb on - strand, within CA264_12545 at 2925.361 kb on + strand, within CA264_12545 at 2925.361 kb on + strand, within CA264_12545 at 2925.361 kb on + strand, within CA264_12545 at 2925.362 kb on - strand, within CA264_12545 at 2925.362 kb on - strand, within CA264_12545 at 2925.362 kb on - strand, within CA264_12545 at 2925.371 kb on - strand, within CA264_12545 at 2925.415 kb on + strand, within CA264_12545 at 2925.549 kb on + strand, within CA264_12545 at 2925.549 kb on + strand, within CA264_12545 at 2925.549 kb on + strand, within CA264_12545 at 2925.549 kb on + strand, within CA264_12545 at 2925.553 kb on + strand, within CA264_12545 at 2925.553 kb on + strand, within CA264_12545 at 2925.553 kb on + strand, within CA264_12545 at 2925.554 kb on - strand, within CA264_12545 at 2925.554 kb on - strand, within CA264_12545 at 2925.554 kb on - strand, within CA264_12545 at 2925.595 kb on - strand, within CA264_12545 at 2925.596 kb on + strand, within CA264_12545 at 2925.596 kb on + strand, within CA264_12545 at 2925.679 kb on + strand, within CA264_12545 at 2925.680 kb on - strand, within CA264_12545 at 2925.697 kb on + strand, within CA264_12545 at 2925.713 kb on + strand at 2925.789 kb on + strand at 2925.789 kb on + strand at 2925.815 kb on - strand at 2925.815 kb on - strand at 2925.815 kb on - strand at 2925.903 kb on + strand at 2926.067 kb on - strand at 2926.108 kb on - strand at 2926.144 kb on - strand at 2926.147 kb on - strand at 2926.156 kb on + strand at 2926.284 kb on - strand at 2926.287 kb on + strand at 2926.552 kb on + strand, within CA264_12550 at 2926.552 kb on + strand, within CA264_12550 at 2926.553 kb on - strand, within CA264_12550 at 2926.562 kb on - strand, within CA264_12550 at 2926.562 kb on - strand, within CA264_12550 at 2926.568 kb on - strand, within CA264_12550 at 2926.721 kb on + strand, within CA264_12550 at 2926.728 kb on + strand, within CA264_12550 at 2926.728 kb on + strand, within CA264_12550 at 2926.761 kb on - strand, within CA264_12550 at 2926.761 kb on - strand, within CA264_12550 at 2926.776 kb on + strand, within CA264_12550 at 2926.776 kb on + strand, within CA264_12550 at 2926.776 kb on + strand, within CA264_12550 at 2926.777 kb on - strand, within CA264_12550 at 2926.777 kb on - strand, within CA264_12550 at 2926.820 kb on - strand, within CA264_12550 at 2926.820 kb on - strand, within CA264_12550 at 2926.821 kb on + strand at 2926.822 kb on - strand, within CA264_12550 at 2926.843 kb on + strand, within CA264_12550 at 2926.849 kb on - strand, within CA264_12550 at 2926.849 kb on - strand, within CA264_12550 at 2926.876 kb on + strand, within CA264_12550 at 2926.876 kb on + strand, within CA264_12550 at 2926.876 kb on + strand, within CA264_12550 at 2926.877 kb on - strand, within CA264_12550 at 2926.878 kb on + strand, within CA264_12550 at 2926.878 kb on + strand, within CA264_12550 at 2926.959 kb on + strand, within CA264_12550 at 2926.960 kb on - strand, within CA264_12550 at 2926.960 kb on - strand, within CA264_12550 at 2926.963 kb on - strand, within CA264_12550
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 2,922,666 + +0.8 2,922,666 + -0.3 2,922,680 + -0.3 2,922,680 + -0.3 2,922,719 + +1.7 2,922,719 + +0.2 2,922,719 + +1.5 2,922,720 - -0.3 2,922,720 - +1.7 2,922,720 - -0.6 2,922,723 + -0.3 2,922,723 + +3.1 2,922,724 - +0.1 2,922,724 - -0.0 2,922,724 - -0.3 2,922,724 - -0.6 2,922,724 - +0.1 2,922,726 - +1.1 2,922,726 - -0.1 2,922,731 + +0.3 2,922,737 - -0.6 2,922,737 - +1.2 2,922,738 + +0.1 2,922,738 + -0.4 2,922,738 + +0.5 2,922,739 - -0.3 2,922,783 - -0.3 2,922,837 - CA264_12540 0.13 +1.9 2,922,975 + CA264_12540 0.29 -0.9 2,922,975 + CA264_12540 0.29 +1.7 2,923,006 + CA264_12540 0.32 +0.3 2,923,007 - CA264_12540 0.32 -0.3 2,923,064 + CA264_12540 0.39 -0.3 2,923,219 + CA264_12540 0.57 +1.3 2,923,219 + CA264_12540 0.57 -0.7 2,923,284 + CA264_12540 0.64 -0.2 2,923,285 - CA264_12540 0.64 -0.5 2,923,285 - CA264_12540 0.64 +0.9 2,923,325 + CA264_12540 0.69 -0.3 2,923,325 + CA264_12540 0.69 +0.2 2,923,328 - CA264_12540 0.69 +0.5 2,923,331 + CA264_12540 0.70 -1.2 2,923,331 + CA264_12540 0.70 +0.4 2,923,338 - CA264_12540 0.71 -1.7 2,923,397 - CA264_12540 0.77 -0.1 2,923,420 - CA264_12540 0.80 -0.1 2,923,555 + -0.2 2,923,555 + -0.1 2,923,560 + +1.0 2,923,560 + -1.3 2,923,560 + -0.3 2,923,560 + -0.2 2,923,561 - -1.1 2,923,573 - +1.2 2,923,590 + -0.3 2,923,612 + +0.7 2,923,612 + -0.6 2,923,613 - -0.2 2,923,613 - -3.0 2,923,631 + +0.7 2,923,634 - +0.6 2,923,838 - +1.5 2,923,933 - CA264_12545 0.12 -0.4 2,924,105 + CA264_12545 0.20 -2.0 2,924,106 - CA264_12545 0.20 +0.1 2,924,106 - CA264_12545 0.20 -0.3 2,924,182 - CA264_12545 0.23 -0.0 2,924,318 - CA264_12545 0.29 +0.4 2,924,477 + CA264_12545 0.35 +0.3 2,924,511 - CA264_12545 0.37 +0.9 2,924,511 - CA264_12545 0.37 -0.7 2,924,530 + CA264_12545 0.38 +1.7 2,924,530 + CA264_12545 0.38 -0.5 2,924,598 - CA264_12545 0.40 -0.0 2,924,598 - CA264_12545 0.40 -0.9 2,924,605 + CA264_12545 0.41 -0.1 2,924,611 + CA264_12545 0.41 +0.6 2,924,708 + CA264_12545 0.45 -0.4 2,924,708 + CA264_12545 0.45 +0.7 2,924,794 + CA264_12545 0.49 +0.6 2,924,825 - CA264_12545 0.50 -0.2 2,924,874 + CA264_12545 0.52 -0.7 2,925,046 - CA264_12545 0.59 -0.4 2,925,046 - CA264_12545 0.59 +0.4 2,925,087 + CA264_12545 0.61 +1.2 2,925,087 + CA264_12545 0.61 +1.2 2,925,088 - CA264_12545 0.61 -0.4 2,925,088 - CA264_12545 0.61 +0.3 2,925,138 - CA264_12545 0.63 -0.1 2,925,141 + CA264_12545 0.63 -0.3 2,925,160 - CA264_12545 0.64 -0.4 2,925,202 + CA264_12545 0.66 -0.7 2,925,203 - CA264_12545 0.66 -0.4 2,925,291 - CA264_12545 0.70 -0.1 2,925,361 + CA264_12545 0.73 +1.0 2,925,361 + CA264_12545 0.73 +0.3 2,925,361 + CA264_12545 0.73 -0.6 2,925,362 - CA264_12545 0.73 -1.3 2,925,362 - CA264_12545 0.73 -0.4 2,925,362 - CA264_12545 0.73 -0.7 2,925,371 - CA264_12545 0.73 -1.3 2,925,415 + CA264_12545 0.75 -0.4 2,925,549 + CA264_12545 0.81 +1.9 2,925,549 + CA264_12545 0.81 -0.6 2,925,549 + CA264_12545 0.81 +1.2 2,925,549 + CA264_12545 0.81 -0.8 2,925,553 + CA264_12545 0.81 -1.3 2,925,553 + CA264_12545 0.81 -1.6 2,925,553 + CA264_12545 0.81 +0.2 2,925,554 - CA264_12545 0.81 -0.2 2,925,554 - CA264_12545 0.81 -0.7 2,925,554 - CA264_12545 0.81 -0.6 2,925,595 - CA264_12545 0.83 +0.8 2,925,596 + CA264_12545 0.83 -0.4 2,925,596 + CA264_12545 0.83 -0.1 2,925,679 + CA264_12545 0.86 -0.6 2,925,680 - CA264_12545 0.86 -0.4 2,925,697 + CA264_12545 0.87 -0.8 2,925,713 + +1.2 2,925,789 + +0.2 2,925,789 + +1.7 2,925,815 - -0.5 2,925,815 - +0.3 2,925,815 - -0.4 2,925,903 + -1.2 2,926,067 - -1.3 2,926,108 - +1.5 2,926,144 - -1.1 2,926,147 - +0.3 2,926,156 + +0.7 2,926,284 - -0.6 2,926,287 + +0.6 2,926,552 + CA264_12550 0.14 +0.3 2,926,552 + CA264_12550 0.14 -0.6 2,926,553 - CA264_12550 0.14 -0.6 2,926,562 - CA264_12550 0.14 -0.3 2,926,562 - CA264_12550 0.14 -0.8 2,926,568 - CA264_12550 0.15 -0.4 2,926,721 + CA264_12550 0.20 +0.7 2,926,728 + CA264_12550 0.20 +0.8 2,926,728 + CA264_12550 0.20 +0.2 2,926,761 - CA264_12550 0.21 -0.5 2,926,761 - CA264_12550 0.21 +0.6 2,926,776 + CA264_12550 0.22 -0.2 2,926,776 + CA264_12550 0.22 +1.4 2,926,776 + CA264_12550 0.22 +0.5 2,926,777 - CA264_12550 0.22 -0.6 2,926,777 - CA264_12550 0.22 -0.4 2,926,820 - CA264_12550 0.23 -0.5 2,926,820 - CA264_12550 0.23 -1.5 2,926,821 + +2.2 2,926,822 - CA264_12550 0.23 +0.1 2,926,843 + CA264_12550 0.24 +0.4 2,926,849 - CA264_12550 0.24 +0.5 2,926,849 - CA264_12550 0.24 +0.4 2,926,876 + CA264_12550 0.25 +0.6 2,926,876 + CA264_12550 0.25 +0.2 2,926,876 + CA264_12550 0.25 -0.6 2,926,877 - CA264_12550 0.25 +0.6 2,926,878 + CA264_12550 0.25 -0.6 2,926,878 + CA264_12550 0.25 +0.6 2,926,959 + CA264_12550 0.28 +0.9 2,926,960 - CA264_12550 0.28 -0.5 2,926,960 - CA264_12550 0.28 -0.9 2,926,963 - CA264_12550 0.28 -0.3
Or see this region's nucleotide sequence