Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_11355

Experiment: m.b. Thallium(I) acetate 0.001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_11350 and CA264_11355 are separated by 15 nucleotidesCA264_11355 and CA264_11360 are separated by 439 nucleotidesCA264_11360 and CA264_11365 are separated by 58 nucleotides CA264_11350: CA264_11350 - glycerol kinase, at 2,629,689 to 2,631,173 _11350 CA264_11355: CA264_11355 - FAD-dependent oxidoreductase, at 2,631,189 to 2,632,751 _11355 CA264_11360: CA264_11360 - hypothetical protein, at 2,633,191 to 2,633,424 _11360 CA264_11365: CA264_11365 - hypothetical protein, at 2,633,483 to 2,633,989 _11365 Position (kb) 2631 2632 2633Strain fitness (log2 ratio) -2 -1 0 1at 2630.274 kb on + strand, within CA264_11350at 2630.281 kb on + strand, within CA264_11350at 2630.281 kb on + strand, within CA264_11350at 2630.342 kb on + strand, within CA264_11350at 2630.369 kb on + strand, within CA264_11350at 2630.369 kb on + strand, within CA264_11350at 2630.369 kb on + strand, within CA264_11350at 2630.369 kb on + strand, within CA264_11350at 2630.370 kb on - strand, within CA264_11350at 2630.370 kb on - strand, within CA264_11350at 2630.386 kb on + strand, within CA264_11350at 2630.386 kb on - strand, within CA264_11350at 2630.387 kb on - strand, within CA264_11350at 2630.390 kb on + strand, within CA264_11350at 2630.466 kb on - strand, within CA264_11350at 2630.526 kb on + strand, within CA264_11350at 2630.556 kb on - strand, within CA264_11350at 2630.602 kb on + strand, within CA264_11350at 2630.603 kb on - strand, within CA264_11350at 2630.734 kb on - strand, within CA264_11350at 2630.885 kb on - strand, within CA264_11350at 2630.885 kb on - strand, within CA264_11350at 2630.956 kb on - strand, within CA264_11350at 2630.956 kb on - strand, within CA264_11350at 2630.958 kb on - strand, within CA264_11350at 2630.986 kb on - strand, within CA264_11350at 2631.061 kb on + strandat 2631.061 kb on + strandat 2631.062 kb on - strandat 2631.118 kb on - strandat 2631.118 kb on - strandat 2631.134 kb on + strandat 2631.134 kb on + strandat 2631.134 kb on + strandat 2631.137 kb on + strandat 2631.137 kb on + strandat 2631.137 kb on + strandat 2631.138 kb on - strandat 2631.138 kb on - strandat 2631.159 kb on + strandat 2631.161 kb on + strandat 2631.164 kb on - strandat 2631.180 kb on + strandat 2631.181 kb on - strandat 2631.186 kb on - strandat 2631.186 kb on - strandat 2631.226 kb on + strandat 2631.226 kb on + strandat 2631.242 kb on - strandat 2632.156 kb on + strand, within CA264_11355at 2632.487 kb on + strand, within CA264_11355at 2632.926 kb on + strandat 2632.926 kb on + strandat 2632.929 kb on + strandat 2632.937 kb on + strandat 2632.955 kb on + strandat 2632.955 kb on + strandat 2632.955 kb on + strandat 2632.955 kb on + strandat 2632.955 kb on + strandat 2632.955 kb on + strandat 2632.955 kb on + strandat 2632.955 kb on + strandat 2632.956 kb on - strandat 2633.106 kb on + strandat 2633.107 kb on - strandat 2633.136 kb on + strandat 2633.136 kb on + strandat 2633.137 kb on - strandat 2633.137 kb on - strandat 2633.138 kb on + strandat 2633.139 kb on - strandat 2633.140 kb on + strandat 2633.140 kb on + strandat 2633.141 kb on - strandat 2633.141 kb on - strandat 2633.141 kb on - strandat 2633.197 kb on + strandat 2633.197 kb on + strandat 2633.214 kb on - strandat 2633.250 kb on + strand, within CA264_11360at 2633.294 kb on - strand, within CA264_11360at 2633.366 kb on + strand, within CA264_11360at 2633.386 kb on - strand, within CA264_11360at 2633.410 kb on + strandat 2633.418 kb on + strandat 2633.423 kb on - strandat 2633.423 kb on - strandat 2633.442 kb on - strandat 2633.461 kb on + strandat 2633.462 kb on - strandat 2633.463 kb on + strandat 2633.464 kb on - strandat 2633.493 kb on + strandat 2633.523 kb on - strandat 2633.553 kb on + strand, within CA264_11365at 2633.579 kb on - strand, within CA264_11365at 2633.584 kb on + strand, within CA264_11365at 2633.584 kb on + strand, within CA264_11365at 2633.585 kb on - strand, within CA264_11365at 2633.585 kb on - strand, within CA264_11365at 2633.592 kb on - strand, within CA264_11365at 2633.613 kb on - strand, within CA264_11365at 2633.668 kb on - strand, within CA264_11365at 2633.676 kb on + strand, within CA264_11365at 2633.682 kb on - strand, within CA264_11365at 2633.682 kb on - strand, within CA264_11365at 2633.682 kb on - strand, within CA264_11365at 2633.682 kb on - strand, within CA264_11365at 2633.682 kb on - strand, within CA264_11365at 2633.682 kb on - strand, within CA264_11365at 2633.711 kb on - strand, within CA264_11365at 2633.711 kb on - strand, within CA264_11365at 2633.711 kb on - strand, within CA264_11365at 2633.720 kb on - strand, within CA264_11365at 2633.727 kb on - strand, within CA264_11365at 2633.745 kb on - strand, within CA264_11365

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml
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2,630,274 + CA264_11350 0.39 -0.3
2,630,281 + CA264_11350 0.40 -0.7
2,630,281 + CA264_11350 0.40 -0.7
2,630,342 + CA264_11350 0.44 -0.8
2,630,369 + CA264_11350 0.46 -0.2
2,630,369 + CA264_11350 0.46 -1.2
2,630,369 + CA264_11350 0.46 -0.3
2,630,369 + CA264_11350 0.46 -0.3
2,630,370 - CA264_11350 0.46 +0.6
2,630,370 - CA264_11350 0.46 -1.2
2,630,386 + CA264_11350 0.47 -0.0
2,630,386 - CA264_11350 0.47 -0.0
2,630,387 - CA264_11350 0.47 +0.7
2,630,390 + CA264_11350 0.47 -1.2
2,630,466 - CA264_11350 0.52 +0.6
2,630,526 + CA264_11350 0.56 -0.8
2,630,556 - CA264_11350 0.58 -1.1
2,630,602 + CA264_11350 0.61 -1.6
2,630,603 - CA264_11350 0.62 +0.3
2,630,734 - CA264_11350 0.70 -0.3
2,630,885 - CA264_11350 0.81 -2.2
2,630,885 - CA264_11350 0.81 -0.1
2,630,956 - CA264_11350 0.85 +1.2
2,630,956 - CA264_11350 0.85 +0.7
2,630,958 - CA264_11350 0.85 -0.8
2,630,986 - CA264_11350 0.87 -0.5
2,631,061 + +0.2
2,631,061 + -0.2
2,631,062 - -0.1
2,631,118 - +1.6
2,631,118 - -0.1
2,631,134 + -0.4
2,631,134 + +0.1
2,631,134 + +0.8
2,631,137 + +0.9
2,631,137 + -0.3
2,631,137 + +0.2
2,631,138 - -0.3
2,631,138 - -1.7
2,631,159 + +0.2
2,631,161 + +0.8
2,631,164 - -0.4
2,631,180 + +0.1
2,631,181 - -0.5
2,631,186 - +0.3
2,631,186 - +0.8
2,631,226 + +0.3
2,631,226 + +1.0
2,631,242 - -1.1
2,632,156 + CA264_11355 0.62 -1.9
2,632,487 + CA264_11355 0.83 -2.0
2,632,926 + +0.1
2,632,926 + -1.5
2,632,929 + -0.1
2,632,937 + +1.7
2,632,955 + +0.1
2,632,955 + -0.1
2,632,955 + -0.5
2,632,955 + -1.5
2,632,955 + -1.0
2,632,955 + -0.5
2,632,955 + -0.9
2,632,955 + -1.8
2,632,956 - -0.2
2,633,106 + -0.8
2,633,107 - -1.9
2,633,136 + -0.3
2,633,136 + -0.9
2,633,137 - +0.6
2,633,137 - -2.5
2,633,138 + -0.8
2,633,139 - -2.1
2,633,140 + -0.8
2,633,140 + +0.2
2,633,141 - -0.9
2,633,141 - -1.2
2,633,141 - -0.0
2,633,197 + -0.0
2,633,197 + -0.4
2,633,214 - +0.8
2,633,250 + CA264_11360 0.25 +0.0
2,633,294 - CA264_11360 0.44 -0.6
2,633,366 + CA264_11360 0.75 +0.5
2,633,386 - CA264_11360 0.83 -0.7
2,633,410 + -0.4
2,633,418 + +0.0
2,633,423 - -0.2
2,633,423 - -0.6
2,633,442 - -0.5
2,633,461 + -0.1
2,633,462 - -0.1
2,633,463 + +0.3
2,633,464 - -0.4
2,633,493 + -1.0
2,633,523 - -0.2
2,633,553 + CA264_11365 0.14 +0.6
2,633,579 - CA264_11365 0.19 -0.4
2,633,584 + CA264_11365 0.20 -0.2
2,633,584 + CA264_11365 0.20 -1.1
2,633,585 - CA264_11365 0.20 +0.6
2,633,585 - CA264_11365 0.20 +1.7
2,633,592 - CA264_11365 0.21 +0.3
2,633,613 - CA264_11365 0.26 -0.5
2,633,668 - CA264_11365 0.36 -0.3
2,633,676 + CA264_11365 0.38 +0.8
2,633,682 - CA264_11365 0.39 -2.2
2,633,682 - CA264_11365 0.39 -0.1
2,633,682 - CA264_11365 0.39 -0.5
2,633,682 - CA264_11365 0.39 -0.4
2,633,682 - CA264_11365 0.39 -0.7
2,633,682 - CA264_11365 0.39 +0.2
2,633,711 - CA264_11365 0.45 +0.1
2,633,711 - CA264_11365 0.45 -0.2
2,633,711 - CA264_11365 0.45 -0.0
2,633,720 - CA264_11365 0.47 +0.3
2,633,727 - CA264_11365 0.48 -1.4
2,633,745 - CA264_11365 0.52 -0.1

Or see this region's nucleotide sequence