Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_11215

Experiment: m.b. Thallium(I) acetate 0.001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_11210 and CA264_11215 are separated by 129 nucleotidesCA264_11215 and CA264_11220 are separated by 58 nucleotides CA264_11210: CA264_11210 - ABC transporter ATP-binding protein, at 2,597,489 to 2,598,469 _11210 CA264_11215: CA264_11215 - N-acetyltransferase, at 2,598,599 to 2,599,147 _11215 CA264_11220: CA264_11220 - hypothetical protein, at 2,599,206 to 2,600,210 _11220 Position (kb) 2598 2599 2600Strain fitness (log2 ratio) -2 -1 0 1 2at 2597.608 kb on - strand, within CA264_11210at 2597.608 kb on - strand, within CA264_11210at 2597.690 kb on + strand, within CA264_11210at 2597.691 kb on - strand, within CA264_11210at 2597.791 kb on + strand, within CA264_11210at 2597.794 kb on - strand, within CA264_11210at 2597.816 kb on + strand, within CA264_11210at 2597.816 kb on + strand, within CA264_11210at 2597.816 kb on + strand, within CA264_11210at 2597.817 kb on - strand, within CA264_11210at 2597.953 kb on + strand, within CA264_11210at 2597.953 kb on + strand, within CA264_11210at 2598.120 kb on - strand, within CA264_11210at 2598.127 kb on - strand, within CA264_11210at 2598.170 kb on + strand, within CA264_11210at 2598.170 kb on + strand, within CA264_11210at 2598.171 kb on - strand, within CA264_11210at 2598.288 kb on + strand, within CA264_11210at 2598.288 kb on + strand, within CA264_11210at 2598.290 kb on + strand, within CA264_11210at 2598.291 kb on - strand, within CA264_11210at 2598.524 kb on - strandat 2598.524 kb on - strandat 2598.524 kb on - strandat 2598.601 kb on - strandat 2598.630 kb on + strandat 2598.630 kb on + strandat 2598.853 kb on - strand, within CA264_11215at 2598.857 kb on + strand, within CA264_11215at 2598.858 kb on - strand, within CA264_11215at 2598.858 kb on - strand, within CA264_11215at 2598.899 kb on + strand, within CA264_11215at 2598.899 kb on + strand, within CA264_11215at 2598.900 kb on - strand, within CA264_11215at 2598.900 kb on - strand, within CA264_11215at 2599.059 kb on - strand, within CA264_11215at 2599.100 kb on + strandat 2599.101 kb on - strandat 2599.198 kb on - strandat 2599.207 kb on + strandat 2599.224 kb on + strandat 2599.224 kb on + strandat 2599.232 kb on + strandat 2599.233 kb on - strandat 2599.310 kb on + strand, within CA264_11220at 2599.310 kb on + strand, within CA264_11220at 2599.311 kb on - strand, within CA264_11220at 2599.320 kb on + strand, within CA264_11220at 2599.353 kb on - strand, within CA264_11220at 2599.354 kb on + strand, within CA264_11220at 2599.392 kb on + strand, within CA264_11220at 2599.475 kb on + strand, within CA264_11220at 2599.475 kb on + strand, within CA264_11220at 2599.476 kb on - strand, within CA264_11220at 2599.560 kb on + strand, within CA264_11220at 2599.568 kb on + strand, within CA264_11220at 2599.568 kb on + strand, within CA264_11220at 2599.594 kb on + strand, within CA264_11220at 2599.671 kb on + strand, within CA264_11220at 2599.874 kb on + strand, within CA264_11220at 2599.912 kb on + strand, within CA264_11220at 2599.936 kb on - strand, within CA264_11220at 2600.027 kb on + strand, within CA264_11220at 2600.054 kb on - strand, within CA264_11220at 2600.055 kb on + strand, within CA264_11220at 2600.056 kb on - strand, within CA264_11220at 2600.081 kb on + strand, within CA264_11220at 2600.121 kb on + strandat 2600.125 kb on + strandat 2600.125 kb on + strandat 2600.126 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml
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2,597,608 - CA264_11210 0.12 +1.8
2,597,608 - CA264_11210 0.12 +1.3
2,597,690 + CA264_11210 0.20 -1.1
2,597,691 - CA264_11210 0.21 +0.4
2,597,791 + CA264_11210 0.31 -1.1
2,597,794 - CA264_11210 0.31 +0.2
2,597,816 + CA264_11210 0.33 -0.7
2,597,816 + CA264_11210 0.33 -0.2
2,597,816 + CA264_11210 0.33 +2.0
2,597,817 - CA264_11210 0.33 +0.1
2,597,953 + CA264_11210 0.47 +0.7
2,597,953 + CA264_11210 0.47 +0.7
2,598,120 - CA264_11210 0.64 +0.7
2,598,127 - CA264_11210 0.65 +1.0
2,598,170 + CA264_11210 0.69 +0.6
2,598,170 + CA264_11210 0.69 +0.6
2,598,171 - CA264_11210 0.70 +0.3
2,598,288 + CA264_11210 0.81 +0.8
2,598,288 + CA264_11210 0.81 +0.9
2,598,290 + CA264_11210 0.82 +0.6
2,598,291 - CA264_11210 0.82 +0.6
2,598,524 - -0.2
2,598,524 - +1.4
2,598,524 - -1.0
2,598,601 - -0.0
2,598,630 + +1.0
2,598,630 + -0.5
2,598,853 - CA264_11215 0.46 +0.6
2,598,857 + CA264_11215 0.47 +0.3
2,598,858 - CA264_11215 0.47 +1.7
2,598,858 - CA264_11215 0.47 +0.1
2,598,899 + CA264_11215 0.55 +1.0
2,598,899 + CA264_11215 0.55 +0.6
2,598,900 - CA264_11215 0.55 +0.6
2,598,900 - CA264_11215 0.55 -0.4
2,599,059 - CA264_11215 0.84 +0.9
2,599,100 + +0.2
2,599,101 - -0.2
2,599,198 - +0.1
2,599,207 + +0.5
2,599,224 + -0.0
2,599,224 + +0.1
2,599,232 + +0.3
2,599,233 - +0.3
2,599,310 + CA264_11220 0.10 -2.3
2,599,310 + CA264_11220 0.10 +0.3
2,599,311 - CA264_11220 0.10 +0.3
2,599,320 + CA264_11220 0.11 +1.2
2,599,353 - CA264_11220 0.15 +0.9
2,599,354 + CA264_11220 0.15 +0.4
2,599,392 + CA264_11220 0.19 -0.3
2,599,475 + CA264_11220 0.27 +0.2
2,599,475 + CA264_11220 0.27 +0.2
2,599,476 - CA264_11220 0.27 -0.1
2,599,560 + CA264_11220 0.35 +0.8
2,599,568 + CA264_11220 0.36 -0.0
2,599,568 + CA264_11220 0.36 +2.3
2,599,594 + CA264_11220 0.39 -0.2
2,599,671 + CA264_11220 0.46 -0.4
2,599,874 + CA264_11220 0.66 +0.9
2,599,912 + CA264_11220 0.70 +0.0
2,599,936 - CA264_11220 0.73 -1.2
2,600,027 + CA264_11220 0.82 +0.1
2,600,054 - CA264_11220 0.84 -0.5
2,600,055 + CA264_11220 0.84 +0.4
2,600,056 - CA264_11220 0.85 +0.4
2,600,081 + CA264_11220 0.87 -0.5
2,600,121 + +0.3
2,600,125 + -0.2
2,600,125 + +1.0
2,600,126 - +0.9

Or see this region's nucleotide sequence