Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10895 and CA264_10900 are separated by 121 nucleotides CA264_10900 and CA264_10905 are separated by 0 nucleotides CA264_10905 and CA264_10910 are separated by 23 nucleotides
CA264_10895: CA264_10895 - hypothetical protein, at 2,516,919 to 2,517,617
_10895
CA264_10900: CA264_10900 - hypothetical protein, at 2,517,739 to 2,518,272
_10900
CA264_10905: CA264_10905 - phytoene synthase, at 2,518,273 to 2,519,109
_10905
CA264_10910: CA264_10910 - phytoene dehydrogenase, at 2,519,133 to 2,520,629
_10910
Position (kb)
2518
2519
2520 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2517.346 kb on + strand, within CA264_10895 at 2517.351 kb on - strand, within CA264_10895 at 2517.416 kb on - strand, within CA264_10895 at 2517.538 kb on + strand, within CA264_10895 at 2517.607 kb on + strand at 2517.607 kb on + strand at 2517.608 kb on - strand at 2517.613 kb on + strand at 2517.613 kb on + strand at 2517.613 kb on + strand at 2517.613 kb on + strand at 2517.614 kb on - strand at 2517.651 kb on + strand at 2517.651 kb on + strand at 2517.651 kb on + strand at 2517.651 kb on + strand at 2517.652 kb on - strand at 2517.652 kb on - strand at 2517.652 kb on - strand at 2517.652 kb on - strand at 2517.652 kb on - strand at 2517.652 kb on - strand at 2517.652 kb on - strand at 2517.656 kb on - strand at 2517.674 kb on - strand at 2517.675 kb on + strand at 2517.915 kb on - strand, within CA264_10900 at 2517.915 kb on - strand, within CA264_10900 at 2517.926 kb on + strand, within CA264_10900 at 2517.927 kb on - strand, within CA264_10900 at 2518.029 kb on + strand, within CA264_10900 at 2518.030 kb on - strand, within CA264_10900 at 2518.035 kb on - strand, within CA264_10900 at 2518.049 kb on + strand, within CA264_10900 at 2518.082 kb on + strand, within CA264_10900 at 2518.083 kb on - strand, within CA264_10900 at 2518.112 kb on + strand, within CA264_10900 at 2518.129 kb on - strand, within CA264_10900 at 2518.231 kb on + strand at 2518.232 kb on - strand at 2518.232 kb on - strand at 2518.259 kb on - strand at 2518.259 kb on - strand at 2518.263 kb on + strand at 2518.263 kb on + strand at 2518.263 kb on + strand at 2518.264 kb on - strand at 2518.264 kb on - strand at 2518.264 kb on - strand at 2518.264 kb on - strand at 2518.284 kb on + strand at 2518.308 kb on + strand at 2518.326 kb on + strand at 2518.332 kb on + strand at 2518.332 kb on + strand at 2518.333 kb on - strand at 2518.339 kb on + strand at 2518.345 kb on + strand at 2518.346 kb on - strand at 2518.362 kb on + strand, within CA264_10905 at 2518.363 kb on - strand, within CA264_10905 at 2518.407 kb on - strand, within CA264_10905 at 2518.410 kb on - strand, within CA264_10905 at 2518.411 kb on + strand, within CA264_10905 at 2518.412 kb on - strand, within CA264_10905 at 2518.412 kb on - strand, within CA264_10905 at 2518.412 kb on - strand, within CA264_10905 at 2518.412 kb on - strand, within CA264_10905 at 2518.415 kb on + strand, within CA264_10905 at 2518.415 kb on + strand, within CA264_10905 at 2518.416 kb on - strand, within CA264_10905 at 2518.416 kb on - strand, within CA264_10905 at 2518.416 kb on - strand, within CA264_10905 at 2518.505 kb on - strand, within CA264_10905 at 2518.524 kb on + strand, within CA264_10905 at 2518.525 kb on - strand, within CA264_10905 at 2518.525 kb on - strand, within CA264_10905 at 2518.725 kb on - strand, within CA264_10905 at 2518.725 kb on - strand, within CA264_10905 at 2518.725 kb on - strand, within CA264_10905 at 2518.725 kb on - strand, within CA264_10905 at 2518.725 kb on - strand, within CA264_10905 at 2518.728 kb on + strand, within CA264_10905 at 2518.728 kb on + strand, within CA264_10905 at 2518.731 kb on - strand, within CA264_10905 at 2518.740 kb on - strand, within CA264_10905 at 2518.813 kb on - strand, within CA264_10905 at 2518.892 kb on + strand, within CA264_10905 at 2518.982 kb on + strand, within CA264_10905 at 2518.982 kb on + strand, within CA264_10905 at 2518.987 kb on - strand, within CA264_10905 at 2519.046 kb on + strand at 2519.046 kb on + strand at 2519.052 kb on - strand at 2519.082 kb on + strand at 2519.082 kb on + strand at 2519.082 kb on + strand at 2519.082 kb on + strand at 2519.095 kb on - strand at 2519.126 kb on + strand at 2519.126 kb on + strand at 2519.126 kb on + strand at 2519.127 kb on - strand at 2519.136 kb on + strand at 2519.137 kb on - strand at 2519.172 kb on + strand at 2519.173 kb on - strand at 2519.200 kb on - strand at 2519.249 kb on - strand at 2519.249 kb on - strand at 2519.251 kb on + strand at 2519.252 kb on - strand at 2519.339 kb on + strand, within CA264_10910 at 2519.378 kb on - strand, within CA264_10910 at 2519.389 kb on + strand, within CA264_10910 at 2519.407 kb on - strand, within CA264_10910 at 2519.502 kb on + strand, within CA264_10910 at 2519.503 kb on - strand, within CA264_10910 at 2519.504 kb on + strand, within CA264_10910 at 2519.504 kb on + strand, within CA264_10910 at 2519.504 kb on + strand, within CA264_10910 at 2519.505 kb on - strand, within CA264_10910 at 2519.508 kb on + strand, within CA264_10910 at 2519.508 kb on + strand, within CA264_10910 at 2519.508 kb on + strand, within CA264_10910 at 2519.508 kb on + strand, within CA264_10910 at 2519.508 kb on + strand, within CA264_10910 at 2519.509 kb on - strand, within CA264_10910 at 2519.511 kb on - strand, within CA264_10910 at 2519.511 kb on - strand, within CA264_10910 at 2519.514 kb on + strand, within CA264_10910 at 2519.514 kb on + strand, within CA264_10910 at 2519.515 kb on - strand, within CA264_10910 at 2519.608 kb on + strand, within CA264_10910 at 2519.608 kb on + strand, within CA264_10910 at 2519.608 kb on + strand, within CA264_10910 at 2519.609 kb on - strand, within CA264_10910 at 2519.609 kb on - strand, within CA264_10910 at 2519.609 kb on - strand, within CA264_10910 at 2519.609 kb on - strand, within CA264_10910 at 2519.695 kb on + strand, within CA264_10910 at 2519.696 kb on - strand, within CA264_10910 at 2519.900 kb on - strand, within CA264_10910 at 2520.001 kb on + strand, within CA264_10910 at 2520.001 kb on + strand, within CA264_10910 at 2520.002 kb on - strand, within CA264_10910 at 2520.016 kb on + strand, within CA264_10910 at 2520.016 kb on + strand, within CA264_10910 at 2520.016 kb on + strand, within CA264_10910 at 2520.016 kb on + strand, within CA264_10910 at 2520.078 kb on + strand, within CA264_10910
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 2,517,346 + CA264_10895 0.61 -1.4 2,517,351 - CA264_10895 0.62 +2.3 2,517,416 - CA264_10895 0.71 -0.1 2,517,538 + CA264_10895 0.89 -0.7 2,517,607 + +1.6 2,517,607 + -0.7 2,517,608 - -0.0 2,517,613 + -0.1 2,517,613 + +0.7 2,517,613 + -2.5 2,517,613 + -1.4 2,517,614 - +1.0 2,517,651 + +0.2 2,517,651 + +1.4 2,517,651 + -0.8 2,517,651 + -1.6 2,517,652 - -0.9 2,517,652 - +0.3 2,517,652 - -1.0 2,517,652 - -0.7 2,517,652 - -0.5 2,517,652 - -1.9 2,517,652 - -0.4 2,517,656 - +0.2 2,517,674 - -0.7 2,517,675 + -1.4 2,517,915 - CA264_10900 0.33 -0.2 2,517,915 - CA264_10900 0.33 -0.6 2,517,926 + CA264_10900 0.35 -0.2 2,517,927 - CA264_10900 0.35 -0.7 2,518,029 + CA264_10900 0.54 +0.9 2,518,030 - CA264_10900 0.54 -0.3 2,518,035 - CA264_10900 0.55 +0.7 2,518,049 + CA264_10900 0.58 -1.0 2,518,082 + CA264_10900 0.64 -0.4 2,518,083 - CA264_10900 0.64 -1.2 2,518,112 + CA264_10900 0.70 +0.2 2,518,129 - CA264_10900 0.73 +0.2 2,518,231 + -0.0 2,518,232 - -0.8 2,518,232 - -0.3 2,518,259 - -1.0 2,518,259 - -0.8 2,518,263 + -0.7 2,518,263 + +0.1 2,518,263 + -0.6 2,518,264 - -1.2 2,518,264 - -0.9 2,518,264 - -0.9 2,518,264 - -0.7 2,518,284 + +0.7 2,518,308 + -0.0 2,518,326 + -0.0 2,518,332 + +0.3 2,518,332 + +1.2 2,518,333 - +0.8 2,518,339 + +0.1 2,518,345 + -0.4 2,518,346 - -0.0 2,518,362 + CA264_10905 0.11 +0.9 2,518,363 - CA264_10905 0.11 -0.5 2,518,407 - CA264_10905 0.16 -0.0 2,518,410 - CA264_10905 0.16 -0.4 2,518,411 + CA264_10905 0.16 -0.0 2,518,412 - CA264_10905 0.17 -0.4 2,518,412 - CA264_10905 0.17 -0.2 2,518,412 - CA264_10905 0.17 +0.6 2,518,412 - CA264_10905 0.17 -1.1 2,518,415 + CA264_10905 0.17 -0.2 2,518,415 + CA264_10905 0.17 +0.2 2,518,416 - CA264_10905 0.17 +0.7 2,518,416 - CA264_10905 0.17 -0.2 2,518,416 - CA264_10905 0.17 -0.0 2,518,505 - CA264_10905 0.28 -1.7 2,518,524 + CA264_10905 0.30 +0.5 2,518,525 - CA264_10905 0.30 -0.6 2,518,525 - CA264_10905 0.30 -0.7 2,518,725 - CA264_10905 0.54 -0.7 2,518,725 - CA264_10905 0.54 -0.1 2,518,725 - CA264_10905 0.54 +0.2 2,518,725 - CA264_10905 0.54 -0.2 2,518,725 - CA264_10905 0.54 -0.6 2,518,728 + CA264_10905 0.54 -0.3 2,518,728 + CA264_10905 0.54 +0.5 2,518,731 - CA264_10905 0.55 +0.1 2,518,740 - CA264_10905 0.56 +1.0 2,518,813 - CA264_10905 0.65 +0.2 2,518,892 + CA264_10905 0.74 -0.6 2,518,982 + CA264_10905 0.85 -0.0 2,518,982 + CA264_10905 0.85 +0.3 2,518,987 - CA264_10905 0.85 -0.0 2,519,046 + -0.3 2,519,046 + -1.0 2,519,052 - -0.4 2,519,082 + -0.1 2,519,082 + +0.1 2,519,082 + +0.2 2,519,082 + -0.9 2,519,095 - -1.1 2,519,126 + +0.3 2,519,126 + +1.3 2,519,126 + -0.3 2,519,127 - -1.3 2,519,136 + +0.3 2,519,137 - -0.9 2,519,172 + -0.9 2,519,173 - +1.4 2,519,200 - -1.0 2,519,249 - +1.3 2,519,249 - -0.9 2,519,251 + +0.1 2,519,252 - +0.5 2,519,339 + CA264_10910 0.14 -1.7 2,519,378 - CA264_10910 0.16 +0.3 2,519,389 + CA264_10910 0.17 +0.3 2,519,407 - CA264_10910 0.18 -0.1 2,519,502 + CA264_10910 0.25 -0.2 2,519,503 - CA264_10910 0.25 -0.6 2,519,504 + CA264_10910 0.25 +0.3 2,519,504 + CA264_10910 0.25 -0.9 2,519,504 + CA264_10910 0.25 +0.8 2,519,505 - CA264_10910 0.25 -1.3 2,519,508 + CA264_10910 0.25 +0.8 2,519,508 + CA264_10910 0.25 +1.0 2,519,508 + CA264_10910 0.25 +0.0 2,519,508 + CA264_10910 0.25 +0.3 2,519,508 + CA264_10910 0.25 +0.2 2,519,509 - CA264_10910 0.25 +0.5 2,519,511 - CA264_10910 0.25 -0.4 2,519,511 - CA264_10910 0.25 -0.6 2,519,514 + CA264_10910 0.25 +1.0 2,519,514 + CA264_10910 0.25 +1.0 2,519,515 - CA264_10910 0.26 -0.2 2,519,608 + CA264_10910 0.32 -0.6 2,519,608 + CA264_10910 0.32 -0.1 2,519,608 + CA264_10910 0.32 +0.1 2,519,609 - CA264_10910 0.32 +1.3 2,519,609 - CA264_10910 0.32 +0.6 2,519,609 - CA264_10910 0.32 -1.5 2,519,609 - CA264_10910 0.32 +0.6 2,519,695 + CA264_10910 0.38 +0.4 2,519,696 - CA264_10910 0.38 -0.7 2,519,900 - CA264_10910 0.51 -0.8 2,520,001 + CA264_10910 0.58 -0.3 2,520,001 + CA264_10910 0.58 +1.5 2,520,002 - CA264_10910 0.58 -1.7 2,520,016 + CA264_10910 0.59 -1.0 2,520,016 + CA264_10910 0.59 +1.0 2,520,016 + CA264_10910 0.59 -0.2 2,520,016 + CA264_10910 0.59 -0.5 2,520,078 + CA264_10910 0.63 +0.3
Or see this region's nucleotide sequence