Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_10730

Experiment: m.b. Thallium(I) acetate 0.001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_10725 and CA264_10730 are separated by 104 nucleotidesCA264_10730 and CA264_10735 are separated by 279 nucleotides CA264_10725: CA264_10725 - T9SS C-terminal target domain-containing protein, at 2,474,612 to 2,477,902 _10725 CA264_10730: CA264_10730 - aconitate hydratase, at 2,478,007 to 2,480,286 _10730 CA264_10735: CA264_10735 - alkyl hydroperoxide reductase, at 2,480,566 to 2,481,747 _10735 Position (kb) 2478 2479 2480 2481Strain fitness (log2 ratio) -2 -1 0 1 2at 2477.029 kb on - strand, within CA264_10725at 2477.055 kb on + strand, within CA264_10725at 2477.056 kb on - strand, within CA264_10725at 2477.157 kb on - strand, within CA264_10725at 2477.249 kb on + strand, within CA264_10725at 2477.255 kb on - strand, within CA264_10725at 2477.307 kb on - strand, within CA264_10725at 2477.347 kb on - strand, within CA264_10725at 2477.371 kb on - strand, within CA264_10725at 2477.445 kb on + strand, within CA264_10725at 2477.445 kb on + strand, within CA264_10725at 2477.446 kb on - strand, within CA264_10725at 2477.446 kb on - strand, within CA264_10725at 2477.446 kb on - strand, within CA264_10725at 2477.551 kb on + strand, within CA264_10725at 2477.551 kb on + strand, within CA264_10725at 2477.551 kb on + strand, within CA264_10725at 2477.552 kb on - strand, within CA264_10725at 2477.552 kb on - strand, within CA264_10725at 2477.552 kb on - strand, within CA264_10725at 2477.552 kb on - strand, within CA264_10725at 2477.552 kb on - strand, within CA264_10725at 2477.552 kb on - strand, within CA264_10725at 2477.555 kb on + strand, within CA264_10725at 2477.573 kb on + strand, within CA264_10725at 2477.573 kb on + strand, within CA264_10725at 2477.574 kb on - strandat 2477.576 kb on - strandat 2477.606 kb on - strandat 2477.606 kb on - strandat 2477.606 kb on - strandat 2477.606 kb on - strandat 2477.625 kb on - strandat 2477.625 kb on - strandat 2477.638 kb on + strandat 2477.638 kb on + strandat 2477.768 kb on - strandat 2477.768 kb on - strandat 2477.810 kb on + strandat 2477.810 kb on + strandat 2477.840 kb on + strandat 2477.840 kb on + strandat 2477.840 kb on + strandat 2477.858 kb on + strandat 2477.901 kb on - strandat 2477.914 kb on + strandat 2480.310 kb on + strandat 2480.311 kb on - strandat 2480.316 kb on - strandat 2480.347 kb on - strandat 2480.366 kb on - strandat 2480.372 kb on + strandat 2480.372 kb on + strandat 2480.373 kb on - strandat 2480.380 kb on + strandat 2480.380 kb on + strandat 2480.380 kb on + strandat 2480.389 kb on - strandat 2480.389 kb on - strandat 2480.407 kb on - strandat 2480.428 kb on + strandat 2480.429 kb on - strandat 2480.429 kb on - strandat 2480.435 kb on + strandat 2480.435 kb on + strandat 2480.435 kb on + strandat 2480.436 kb on - strandat 2480.442 kb on + strandat 2480.549 kb on + strandat 2480.559 kb on + strandat 2480.559 kb on + strandat 2480.559 kb on + strandat 2480.560 kb on - strandat 2480.565 kb on + strandat 2480.565 kb on + strandat 2480.566 kb on - strandat 2480.566 kb on - strandat 2480.589 kb on - strandat 2480.684 kb on + strandat 2480.687 kb on - strand, within CA264_10735at 2480.687 kb on - strand, within CA264_10735at 2480.724 kb on + strand, within CA264_10735at 2480.845 kb on + strand, within CA264_10735at 2480.845 kb on + strand, within CA264_10735at 2480.845 kb on + strand, within CA264_10735at 2480.846 kb on - strand, within CA264_10735at 2480.971 kb on + strand, within CA264_10735at 2480.972 kb on - strand, within CA264_10735at 2481.049 kb on + strand, within CA264_10735at 2481.082 kb on - strand, within CA264_10735at 2481.091 kb on - strand, within CA264_10735at 2481.163 kb on + strand, within CA264_10735at 2481.181 kb on + strand, within CA264_10735at 2481.240 kb on + strand, within CA264_10735

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml
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2,477,029 - CA264_10725 0.73 -0.6
2,477,055 + CA264_10725 0.74 +0.3
2,477,056 - CA264_10725 0.74 -0.6
2,477,157 - CA264_10725 0.77 -0.2
2,477,249 + CA264_10725 0.80 -0.5
2,477,255 - CA264_10725 0.80 +0.0
2,477,307 - CA264_10725 0.82 -0.5
2,477,347 - CA264_10725 0.83 -1.7
2,477,371 - CA264_10725 0.84 -0.7
2,477,445 + CA264_10725 0.86 +0.6
2,477,445 + CA264_10725 0.86 -0.2
2,477,446 - CA264_10725 0.86 -0.9
2,477,446 - CA264_10725 0.86 +0.1
2,477,446 - CA264_10725 0.86 -0.1
2,477,551 + CA264_10725 0.89 -0.6
2,477,551 + CA264_10725 0.89 -0.4
2,477,551 + CA264_10725 0.89 -1.0
2,477,552 - CA264_10725 0.89 -0.2
2,477,552 - CA264_10725 0.89 -1.2
2,477,552 - CA264_10725 0.89 -0.9
2,477,552 - CA264_10725 0.89 +0.0
2,477,552 - CA264_10725 0.89 -0.5
2,477,552 - CA264_10725 0.89 +0.1
2,477,555 + CA264_10725 0.89 -0.3
2,477,573 + CA264_10725 0.90 -0.3
2,477,573 + CA264_10725 0.90 +1.2
2,477,574 - +0.2
2,477,576 - -0.5
2,477,606 - -1.5
2,477,606 - -0.5
2,477,606 - +0.1
2,477,606 - -2.4
2,477,625 - -0.2
2,477,625 - -0.8
2,477,638 + -1.2
2,477,638 + -0.8
2,477,768 - -0.0
2,477,768 - -0.8
2,477,810 + -0.5
2,477,810 + +0.2
2,477,840 + -0.4
2,477,840 + -0.2
2,477,840 + +1.0
2,477,858 + +1.1
2,477,901 - -1.7
2,477,914 + -0.4
2,480,310 + -1.4
2,480,311 - -0.4
2,480,316 - -0.3
2,480,347 - +1.7
2,480,366 - +1.1
2,480,372 + +0.5
2,480,372 + -0.2
2,480,373 - +0.5
2,480,380 + +0.0
2,480,380 + +0.4
2,480,380 + +1.2
2,480,389 - +2.4
2,480,389 - -0.1
2,480,407 - +0.4
2,480,428 + -1.3
2,480,429 - +1.0
2,480,429 - +0.9
2,480,435 + -0.1
2,480,435 + -0.2
2,480,435 + +0.1
2,480,436 - +0.2
2,480,442 + -0.7
2,480,549 + +1.9
2,480,559 + +0.2
2,480,559 + +0.8
2,480,559 + +0.7
2,480,560 - +0.8
2,480,565 + -0.2
2,480,565 + +0.2
2,480,566 - +1.2
2,480,566 - +1.2
2,480,589 - +1.3
2,480,684 + -0.0
2,480,687 - CA264_10735 0.10 +0.9
2,480,687 - CA264_10735 0.10 +0.3
2,480,724 + CA264_10735 0.13 -1.0
2,480,845 + CA264_10735 0.24 +0.7
2,480,845 + CA264_10735 0.24 -0.0
2,480,845 + CA264_10735 0.24 +0.6
2,480,846 - CA264_10735 0.24 +0.9
2,480,971 + CA264_10735 0.34 -0.0
2,480,972 - CA264_10735 0.34 +0.6
2,481,049 + CA264_10735 0.41 +0.4
2,481,082 - CA264_10735 0.44 +1.3
2,481,091 - CA264_10735 0.44 +0.3
2,481,163 + CA264_10735 0.51 +0.7
2,481,181 + CA264_10735 0.52 -2.2
2,481,240 + CA264_10735 0.57 +0.8

Or see this region's nucleotide sequence