Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09540 and CA264_09545 are separated by 147 nucleotides CA264_09545 and CA264_09550 are separated by 113 nucleotides CA264_09550 and CA264_09555 are separated by 58 nucleotides
CA264_09540: CA264_09540 - sodium:proton exchanger, at 2,227,503 to 2,228,453
_09540
CA264_09545: CA264_09545 - hypothetical protein, at 2,228,601 to 2,228,960
_09545
CA264_09550: CA264_09550 - hypothetical protein, at 2,229,074 to 2,229,727
_09550
CA264_09555: CA264_09555 - potassium transporter Kup, at 2,229,786 to 2,231,723
_09555
Position (kb)
2229
2230 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2228.237 kb on + strand, within CA264_09540 at 2228.246 kb on + strand, within CA264_09540 at 2228.246 kb on + strand, within CA264_09540 at 2228.247 kb on - strand, within CA264_09540 at 2228.313 kb on - strand, within CA264_09540 at 2228.328 kb on - strand, within CA264_09540 at 2228.328 kb on - strand, within CA264_09540 at 2228.330 kb on + strand, within CA264_09540 at 2228.331 kb on - strand, within CA264_09540 at 2228.336 kb on - strand, within CA264_09540 at 2228.361 kb on - strand at 2228.361 kb on - strand at 2228.431 kb on - strand at 2228.447 kb on - strand at 2228.479 kb on + strand at 2228.610 kb on - strand at 2228.615 kb on + strand at 2228.615 kb on + strand at 2228.615 kb on + strand at 2228.616 kb on - strand at 2228.616 kb on - strand at 2228.616 kb on - strand at 2228.627 kb on + strand at 2228.848 kb on + strand, within CA264_09545 at 2228.936 kb on + strand at 2228.936 kb on + strand at 2228.949 kb on - strand at 2228.949 kb on - strand at 2228.978 kb on - strand at 2229.018 kb on + strand at 2229.018 kb on + strand at 2229.038 kb on + strand at 2229.039 kb on - strand at 2229.147 kb on - strand, within CA264_09550 at 2229.279 kb on + strand, within CA264_09550 at 2229.280 kb on - strand, within CA264_09550 at 2229.285 kb on + strand, within CA264_09550 at 2229.342 kb on - strand, within CA264_09550 at 2229.462 kb on - strand, within CA264_09550 at 2229.473 kb on - strand, within CA264_09550 at 2229.473 kb on - strand, within CA264_09550 at 2229.656 kb on - strand, within CA264_09550 at 2229.656 kb on - strand, within CA264_09550 at 2229.672 kb on + strand at 2229.764 kb on + strand at 2229.852 kb on + strand at 2229.911 kb on + strand at 2229.930 kb on + strand at 2229.938 kb on + strand at 2229.940 kb on + strand at 2229.941 kb on - strand at 2229.974 kb on + strand at 2229.977 kb on + strand at 2229.980 kb on - strand, within CA264_09555 at 2229.980 kb on - strand, within CA264_09555 at 2229.980 kb on - strand, within CA264_09555 at 2229.984 kb on + strand, within CA264_09555 at 2230.085 kb on + strand, within CA264_09555 at 2230.085 kb on + strand, within CA264_09555 at 2230.086 kb on - strand, within CA264_09555 at 2230.118 kb on + strand, within CA264_09555 at 2230.118 kb on + strand, within CA264_09555 at 2230.119 kb on - strand, within CA264_09555 at 2230.119 kb on - strand, within CA264_09555 at 2230.151 kb on + strand, within CA264_09555 at 2230.154 kb on - strand, within CA264_09555 at 2230.174 kb on - strand, within CA264_09555 at 2230.181 kb on + strand, within CA264_09555 at 2230.256 kb on - strand, within CA264_09555 at 2230.292 kb on + strand, within CA264_09555 at 2230.366 kb on - strand, within CA264_09555 at 2230.371 kb on + strand, within CA264_09555 at 2230.371 kb on + strand, within CA264_09555 at 2230.372 kb on - strand, within CA264_09555 at 2230.372 kb on - strand, within CA264_09555 at 2230.372 kb on - strand, within CA264_09555 at 2230.386 kb on + strand, within CA264_09555 at 2230.386 kb on + strand, within CA264_09555 at 2230.387 kb on - strand, within CA264_09555 at 2230.387 kb on - strand, within CA264_09555 at 2230.387 kb on - strand, within CA264_09555 at 2230.431 kb on - strand, within CA264_09555 at 2230.453 kb on - strand, within CA264_09555 at 2230.484 kb on + strand, within CA264_09555 at 2230.525 kb on + strand, within CA264_09555 at 2230.576 kb on + strand, within CA264_09555 at 2230.577 kb on - strand, within CA264_09555 at 2230.594 kb on - strand, within CA264_09555 at 2230.694 kb on + strand, within CA264_09555 at 2230.694 kb on + strand, within CA264_09555
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 2,228,237 + CA264_09540 0.77 +1.2 2,228,246 + CA264_09540 0.78 +0.4 2,228,246 + CA264_09540 0.78 +1.2 2,228,247 - CA264_09540 0.78 +0.2 2,228,313 - CA264_09540 0.85 -0.9 2,228,328 - CA264_09540 0.87 -0.4 2,228,328 - CA264_09540 0.87 -0.4 2,228,330 + CA264_09540 0.87 +0.4 2,228,331 - CA264_09540 0.87 +0.1 2,228,336 - CA264_09540 0.88 +0.2 2,228,361 - -2.2 2,228,361 - -0.1 2,228,431 - +1.0 2,228,447 - -0.4 2,228,479 + -0.5 2,228,610 - -0.3 2,228,615 + +0.9 2,228,615 + -0.1 2,228,615 + -0.5 2,228,616 - -0.6 2,228,616 - -0.1 2,228,616 - +0.1 2,228,627 + -0.4 2,228,848 + CA264_09545 0.69 -0.4 2,228,936 + -1.1 2,228,936 + +0.3 2,228,949 - -0.3 2,228,949 - -0.2 2,228,978 - -0.2 2,229,018 + +0.2 2,229,018 + +0.8 2,229,038 + -0.0 2,229,039 - +0.2 2,229,147 - CA264_09550 0.11 +0.9 2,229,279 + CA264_09550 0.31 +0.2 2,229,280 - CA264_09550 0.31 +0.6 2,229,285 + CA264_09550 0.32 -0.8 2,229,342 - CA264_09550 0.41 -0.6 2,229,462 - CA264_09550 0.59 +2.4 2,229,473 - CA264_09550 0.61 -0.5 2,229,473 - CA264_09550 0.61 +0.4 2,229,656 - CA264_09550 0.89 +0.4 2,229,656 - CA264_09550 0.89 +0.4 2,229,672 + -0.6 2,229,764 + -0.0 2,229,852 + -0.5 2,229,911 + -0.7 2,229,930 + +0.1 2,229,938 + -1.2 2,229,940 + -1.1 2,229,941 - -0.8 2,229,974 + -0.1 2,229,977 + -0.5 2,229,980 - CA264_09555 0.10 -1.0 2,229,980 - CA264_09555 0.10 -0.9 2,229,980 - CA264_09555 0.10 +0.5 2,229,984 + CA264_09555 0.10 -0.4 2,230,085 + CA264_09555 0.15 -0.3 2,230,085 + CA264_09555 0.15 -1.3 2,230,086 - CA264_09555 0.15 +0.2 2,230,118 + CA264_09555 0.17 -0.4 2,230,118 + CA264_09555 0.17 -0.9 2,230,119 - CA264_09555 0.17 -0.6 2,230,119 - CA264_09555 0.17 +1.6 2,230,151 + CA264_09555 0.19 -1.3 2,230,154 - CA264_09555 0.19 +0.4 2,230,174 - CA264_09555 0.20 -0.5 2,230,181 + CA264_09555 0.20 -0.0 2,230,256 - CA264_09555 0.24 -0.1 2,230,292 + CA264_09555 0.26 -0.3 2,230,366 - CA264_09555 0.30 +0.7 2,230,371 + CA264_09555 0.30 -0.0 2,230,371 + CA264_09555 0.30 +0.4 2,230,372 - CA264_09555 0.30 +0.1 2,230,372 - CA264_09555 0.30 +0.0 2,230,372 - CA264_09555 0.30 -0.8 2,230,386 + CA264_09555 0.31 -0.5 2,230,386 + CA264_09555 0.31 +0.4 2,230,387 - CA264_09555 0.31 -0.6 2,230,387 - CA264_09555 0.31 -0.1 2,230,387 - CA264_09555 0.31 +0.1 2,230,431 - CA264_09555 0.33 +0.6 2,230,453 - CA264_09555 0.34 +0.1 2,230,484 + CA264_09555 0.36 -0.9 2,230,525 + CA264_09555 0.38 -1.0 2,230,576 + CA264_09555 0.41 -0.4 2,230,577 - CA264_09555 0.41 -0.9 2,230,594 - CA264_09555 0.42 +0.3 2,230,694 + CA264_09555 0.47 -1.0 2,230,694 + CA264_09555 0.47 -1.2
Or see this region's nucleotide sequence