Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_07970

Experiment: m.b. Thallium(I) acetate 0.001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_07965 and CA264_07970 are separated by 48 nucleotidesCA264_07970 and CA264_07975 overlap by 11 nucleotides CA264_07965: CA264_07965 - UDP-2,4-diacetamido-2,4, 6-trideoxy-beta-L-altropyranose hydrolase, at 1,841,879 to 1,843,381 _07965 CA264_07970: CA264_07970 - hypothetical protein, at 1,843,430 to 1,844,359 _07970 CA264_07975: CA264_07975 - pseudaminic acid synthase, at 1,844,349 to 1,845,401 _07975 Position (kb) 1843 1844 1845Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1842.465 kb on + strand, within CA264_07965at 1842.466 kb on - strand, within CA264_07965at 1842.466 kb on - strand, within CA264_07965at 1842.478 kb on - strand, within CA264_07965at 1842.514 kb on + strand, within CA264_07965at 1842.625 kb on + strand, within CA264_07965at 1842.636 kb on + strand, within CA264_07965at 1842.637 kb on - strand, within CA264_07965at 1842.652 kb on + strand, within CA264_07965at 1842.652 kb on + strand, within CA264_07965at 1842.655 kb on - strand, within CA264_07965at 1842.661 kb on - strand, within CA264_07965at 1842.661 kb on - strand, within CA264_07965at 1842.661 kb on - strand, within CA264_07965at 1842.661 kb on - strand, within CA264_07965at 1842.701 kb on + strand, within CA264_07965at 1842.701 kb on + strand, within CA264_07965at 1842.702 kb on - strand, within CA264_07965at 1842.705 kb on + strand, within CA264_07965at 1842.706 kb on - strand, within CA264_07965at 1842.706 kb on - strand, within CA264_07965at 1842.771 kb on + strand, within CA264_07965at 1842.839 kb on - strand, within CA264_07965at 1842.882 kb on + strand, within CA264_07965at 1842.893 kb on - strand, within CA264_07965at 1842.905 kb on - strand, within CA264_07965at 1842.925 kb on - strand, within CA264_07965at 1842.954 kb on + strand, within CA264_07965at 1842.962 kb on - strand, within CA264_07965at 1843.015 kb on - strand, within CA264_07965at 1843.019 kb on + strand, within CA264_07965at 1843.041 kb on - strand, within CA264_07965at 1843.070 kb on + strand, within CA264_07965at 1843.070 kb on + strand, within CA264_07965at 1843.084 kb on + strand, within CA264_07965at 1843.084 kb on + strand, within CA264_07965at 1843.114 kb on - strand, within CA264_07965at 1843.151 kb on + strand, within CA264_07965at 1843.151 kb on + strand, within CA264_07965at 1843.152 kb on - strand, within CA264_07965at 1843.222 kb on - strand, within CA264_07965at 1843.249 kb on - strandat 1843.266 kb on + strandat 1843.266 kb on + strandat 1843.354 kb on + strandat 1843.379 kb on + strandat 1843.389 kb on + strandat 1843.389 kb on + strandat 1843.390 kb on - strandat 1843.390 kb on - strandat 1843.391 kb on + strandat 1843.391 kb on + strandat 1843.392 kb on - strandat 1843.392 kb on - strandat 1843.392 kb on - strandat 1843.392 kb on - strandat 1843.396 kb on + strandat 1843.396 kb on + strandat 1843.397 kb on - strandat 1843.397 kb on - strandat 1843.411 kb on + strandat 1843.424 kb on - strandat 1843.425 kb on + strandat 1843.426 kb on - strandat 1843.571 kb on - strand, within CA264_07970at 1843.615 kb on + strand, within CA264_07970at 1843.616 kb on - strand, within CA264_07970at 1843.709 kb on - strand, within CA264_07970at 1843.750 kb on + strand, within CA264_07970at 1843.750 kb on + strand, within CA264_07970at 1843.751 kb on - strand, within CA264_07970at 1843.751 kb on - strand, within CA264_07970at 1843.756 kb on - strand, within CA264_07970at 1843.763 kb on + strand, within CA264_07970at 1843.763 kb on + strand, within CA264_07970at 1843.764 kb on - strand, within CA264_07970at 1843.764 kb on - strand, within CA264_07970at 1843.784 kb on + strand, within CA264_07970at 1843.784 kb on + strand, within CA264_07970at 1843.786 kb on + strand, within CA264_07970at 1843.831 kb on + strand, within CA264_07970at 1843.850 kb on + strand, within CA264_07970at 1843.850 kb on + strand, within CA264_07970at 1843.906 kb on + strand, within CA264_07970at 1843.906 kb on + strand, within CA264_07970at 1843.911 kb on + strand, within CA264_07970at 1843.912 kb on - strand, within CA264_07970at 1843.948 kb on + strand, within CA264_07970at 1843.953 kb on + strand, within CA264_07970at 1843.954 kb on - strand, within CA264_07970at 1844.044 kb on - strand, within CA264_07970at 1844.114 kb on + strand, within CA264_07970at 1844.120 kb on - strand, within CA264_07970at 1844.181 kb on + strand, within CA264_07970at 1844.235 kb on + strand, within CA264_07970at 1844.235 kb on + strand, within CA264_07970at 1844.236 kb on - strand, within CA264_07970at 1844.236 kb on - strand, within CA264_07970at 1844.236 kb on - strand, within CA264_07970at 1844.330 kb on + strandat 1844.330 kb on + strandat 1844.330 kb on + strandat 1844.357 kb on + strandat 1844.358 kb on - strandat 1844.358 kb on - strandat 1844.361 kb on - strandat 1844.363 kb on + strandat 1844.364 kb on - strandat 1844.364 kb on - strandat 1844.419 kb on + strandat 1844.442 kb on + strandat 1844.464 kb on + strand, within CA264_07975at 1844.464 kb on + strand, within CA264_07975at 1844.465 kb on - strand, within CA264_07975at 1844.465 kb on - strand, within CA264_07975at 1844.503 kb on + strand, within CA264_07975at 1844.570 kb on + strand, within CA264_07975at 1844.616 kb on + strand, within CA264_07975at 1844.617 kb on - strand, within CA264_07975at 1844.670 kb on - strand, within CA264_07975at 1844.731 kb on + strand, within CA264_07975at 1844.731 kb on + strand, within CA264_07975at 1844.739 kb on + strand, within CA264_07975at 1844.739 kb on + strand, within CA264_07975at 1844.746 kb on + strand, within CA264_07975at 1844.746 kb on + strand, within CA264_07975at 1844.747 kb on - strand, within CA264_07975at 1844.789 kb on - strand, within CA264_07975at 1844.815 kb on + strand, within CA264_07975at 1844.825 kb on + strand, within CA264_07975at 1844.825 kb on + strand, within CA264_07975at 1844.843 kb on + strand, within CA264_07975at 1844.844 kb on - strand, within CA264_07975at 1844.846 kb on - strand, within CA264_07975at 1844.867 kb on + strand, within CA264_07975at 1844.867 kb on + strand, within CA264_07975at 1844.921 kb on + strand, within CA264_07975at 1844.922 kb on - strand, within CA264_07975at 1844.928 kb on - strand, within CA264_07975at 1844.938 kb on + strand, within CA264_07975at 1844.939 kb on - strand, within CA264_07975at 1844.962 kb on + strand, within CA264_07975at 1844.963 kb on - strand, within CA264_07975at 1844.963 kb on - strand, within CA264_07975at 1844.969 kb on + strand, within CA264_07975at 1844.970 kb on - strand, within CA264_07975at 1844.974 kb on - strand, within CA264_07975at 1844.974 kb on - strand, within CA264_07975at 1845.017 kb on + strand, within CA264_07975at 1845.017 kb on + strand, within CA264_07975at 1845.018 kb on - strand, within CA264_07975at 1845.019 kb on + strand, within CA264_07975at 1845.019 kb on + strand, within CA264_07975at 1845.020 kb on - strand, within CA264_07975at 1845.020 kb on - strand, within CA264_07975at 1845.026 kb on - strand, within CA264_07975at 1845.069 kb on - strand, within CA264_07975at 1845.110 kb on + strand, within CA264_07975at 1845.235 kb on - strand, within CA264_07975at 1845.329 kb on + strandat 1845.330 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml
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1,842,465 + CA264_07965 0.39 -1.0
1,842,466 - CA264_07965 0.39 -0.2
1,842,466 - CA264_07965 0.39 +0.7
1,842,478 - CA264_07965 0.40 +0.4
1,842,514 + CA264_07965 0.42 -2.3
1,842,625 + CA264_07965 0.50 -1.6
1,842,636 + CA264_07965 0.50 -1.2
1,842,637 - CA264_07965 0.50 -1.0
1,842,652 + CA264_07965 0.51 -1.9
1,842,652 + CA264_07965 0.51 -1.5
1,842,655 - CA264_07965 0.52 -0.6
1,842,661 - CA264_07965 0.52 -0.6
1,842,661 - CA264_07965 0.52 -0.1
1,842,661 - CA264_07965 0.52 -2.0
1,842,661 - CA264_07965 0.52 -1.8
1,842,701 + CA264_07965 0.55 +0.3
1,842,701 + CA264_07965 0.55 -0.4
1,842,702 - CA264_07965 0.55 -1.0
1,842,705 + CA264_07965 0.55 -1.1
1,842,706 - CA264_07965 0.55 -1.1
1,842,706 - CA264_07965 0.55 -1.5
1,842,771 + CA264_07965 0.59 -1.3
1,842,839 - CA264_07965 0.64 -0.8
1,842,882 + CA264_07965 0.67 -0.1
1,842,893 - CA264_07965 0.67 +1.4
1,842,905 - CA264_07965 0.68 +1.4
1,842,925 - CA264_07965 0.70 +1.2
1,842,954 + CA264_07965 0.72 +1.3
1,842,962 - CA264_07965 0.72 +1.2
1,843,015 - CA264_07965 0.76 +1.4
1,843,019 + CA264_07965 0.76 +0.8
1,843,041 - CA264_07965 0.77 +1.8
1,843,070 + CA264_07965 0.79 +1.6
1,843,070 + CA264_07965 0.79 +1.0
1,843,084 + CA264_07965 0.80 +1.3
1,843,084 + CA264_07965 0.80 +0.6
1,843,114 - CA264_07965 0.82 +1.4
1,843,151 + CA264_07965 0.85 +2.1
1,843,151 + CA264_07965 0.85 +1.2
1,843,152 - CA264_07965 0.85 +1.7
1,843,222 - CA264_07965 0.89 +1.6
1,843,249 - +1.5
1,843,266 + +1.2
1,843,266 + +1.2
1,843,354 + -0.7
1,843,379 + -0.3
1,843,389 + -0.5
1,843,389 + -0.4
1,843,390 - -0.1
1,843,390 - +0.3
1,843,391 + +0.9
1,843,391 + -0.3
1,843,392 - -0.3
1,843,392 - -2.1
1,843,392 - +0.2
1,843,392 - -0.1
1,843,396 + -0.3
1,843,396 + -0.7
1,843,397 - +0.6
1,843,397 - +0.6
1,843,411 + -0.4
1,843,424 - +0.1
1,843,425 + -0.8
1,843,426 - +0.4
1,843,571 - CA264_07970 0.15 -1.3
1,843,615 + CA264_07970 0.20 -1.9
1,843,616 - CA264_07970 0.20 -1.7
1,843,709 - CA264_07970 0.30 -0.7
1,843,750 + CA264_07970 0.34 +0.9
1,843,750 + CA264_07970 0.34 -1.0
1,843,751 - CA264_07970 0.35 -1.4
1,843,751 - CA264_07970 0.35 -1.7
1,843,756 - CA264_07970 0.35 -0.7
1,843,763 + CA264_07970 0.36 -1.4
1,843,763 + CA264_07970 0.36 -0.6
1,843,764 - CA264_07970 0.36 -1.8
1,843,764 - CA264_07970 0.36 -2.0
1,843,784 + CA264_07970 0.38 -1.9
1,843,784 + CA264_07970 0.38 -0.3
1,843,786 + CA264_07970 0.38 -0.8
1,843,831 + CA264_07970 0.43 -1.8
1,843,850 + CA264_07970 0.45 -2.5
1,843,850 + CA264_07970 0.45 -1.3
1,843,906 + CA264_07970 0.51 -1.7
1,843,906 + CA264_07970 0.51 -1.2
1,843,911 + CA264_07970 0.52 -1.4
1,843,912 - CA264_07970 0.52 -0.8
1,843,948 + CA264_07970 0.56 -2.6
1,843,953 + CA264_07970 0.56 -3.4
1,843,954 - CA264_07970 0.56 -0.3
1,844,044 - CA264_07970 0.66 +0.2
1,844,114 + CA264_07970 0.74 -2.2
1,844,120 - CA264_07970 0.74 -1.4
1,844,181 + CA264_07970 0.81 -2.4
1,844,235 + CA264_07970 0.87 -0.8
1,844,235 + CA264_07970 0.87 -0.1
1,844,236 - CA264_07970 0.87 -2.0
1,844,236 - CA264_07970 0.87 -1.2
1,844,236 - CA264_07970 0.87 -1.1
1,844,330 + -1.0
1,844,330 + -0.3
1,844,330 + -2.9
1,844,357 + -0.5
1,844,358 - +0.5
1,844,358 - -2.3
1,844,361 - -0.3
1,844,363 + -0.7
1,844,364 - -1.5
1,844,364 - -2.1
1,844,419 + +0.9
1,844,442 + -0.3
1,844,464 + CA264_07975 0.11 -0.4
1,844,464 + CA264_07975 0.11 -0.3
1,844,465 - CA264_07975 0.11 -1.1
1,844,465 - CA264_07975 0.11 -0.3
1,844,503 + CA264_07975 0.15 +0.9
1,844,570 + CA264_07975 0.21 -0.1
1,844,616 + CA264_07975 0.25 -0.6
1,844,617 - CA264_07975 0.25 +0.9
1,844,670 - CA264_07975 0.30 -1.0
1,844,731 + CA264_07975 0.36 -1.3
1,844,731 + CA264_07975 0.36 +1.5
1,844,739 + CA264_07975 0.37 -1.3
1,844,739 + CA264_07975 0.37 -1.4
1,844,746 + CA264_07975 0.38 -0.5
1,844,746 + CA264_07975 0.38 -0.8
1,844,747 - CA264_07975 0.38 -0.9
1,844,789 - CA264_07975 0.42 -1.6
1,844,815 + CA264_07975 0.44 -1.8
1,844,825 + CA264_07975 0.45 -0.7
1,844,825 + CA264_07975 0.45 -0.7
1,844,843 + CA264_07975 0.47 -1.2
1,844,844 - CA264_07975 0.47 -0.7
1,844,846 - CA264_07975 0.47 -0.8
1,844,867 + CA264_07975 0.49 +0.5
1,844,867 + CA264_07975 0.49 -1.2
1,844,921 + CA264_07975 0.54 -0.8
1,844,922 - CA264_07975 0.54 -1.0
1,844,928 - CA264_07975 0.55 -1.0
1,844,938 + CA264_07975 0.56 -1.7
1,844,939 - CA264_07975 0.56 +1.8
1,844,962 + CA264_07975 0.58 -0.8
1,844,963 - CA264_07975 0.58 -1.6
1,844,963 - CA264_07975 0.58 -1.1
1,844,969 + CA264_07975 0.59 +0.4
1,844,970 - CA264_07975 0.59 -1.2
1,844,974 - CA264_07975 0.59 -0.4
1,844,974 - CA264_07975 0.59 -0.4
1,845,017 + CA264_07975 0.63 -0.6
1,845,017 + CA264_07975 0.63 -0.6
1,845,018 - CA264_07975 0.64 -0.2
1,845,019 + CA264_07975 0.64 -2.5
1,845,019 + CA264_07975 0.64 -0.5
1,845,020 - CA264_07975 0.64 -1.1
1,845,020 - CA264_07975 0.64 -0.4
1,845,026 - CA264_07975 0.64 -0.5
1,845,069 - CA264_07975 0.68 -0.5
1,845,110 + CA264_07975 0.72 -0.9
1,845,235 - CA264_07975 0.84 +0.3
1,845,329 + -0.3
1,845,330 - -1.3

Or see this region's nucleotide sequence