Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07070 and CA264_07075 are separated by 237 nucleotides CA264_07075 and CA264_07080 are separated by 425 nucleotides
CA264_07070: CA264_07070 - DNA polymerase III subunit epsilon, at 1,629,160 to 1,629,714
_07070
CA264_07075: CA264_07075 - hypothetical protein, at 1,629,952 to 1,630,257
_07075
CA264_07080: CA264_07080 - oxidoreductase, at 1,630,683 to 1,631,579
_07080
Position (kb)
1629
1630
1631 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1628.968 kb on + strand at 1629.286 kb on + strand, within CA264_07070 at 1629.287 kb on - strand, within CA264_07070 at 1629.462 kb on + strand, within CA264_07070 at 1629.473 kb on + strand, within CA264_07070 at 1629.473 kb on + strand, within CA264_07070 at 1629.474 kb on - strand, within CA264_07070 at 1629.474 kb on - strand, within CA264_07070 at 1629.702 kb on - strand at 1629.742 kb on + strand at 1629.743 kb on - strand at 1629.743 kb on - strand at 1629.743 kb on - strand at 1629.747 kb on + strand at 1629.798 kb on + strand at 1629.856 kb on + strand at 1629.856 kb on + strand at 1629.857 kb on - strand at 1629.857 kb on - strand at 1629.857 kb on - strand at 1629.857 kb on - strand at 1629.860 kb on + strand at 1629.860 kb on + strand at 1629.860 kb on + strand at 1629.860 kb on + strand at 1629.860 kb on + strand at 1629.861 kb on - strand at 1629.861 kb on - strand at 1629.861 kb on - strand at 1629.870 kb on - strand at 1629.880 kb on - strand at 1629.880 kb on - strand at 1629.880 kb on - strand at 1629.888 kb on + strand at 1629.888 kb on + strand at 1630.005 kb on + strand, within CA264_07075 at 1630.005 kb on + strand, within CA264_07075 at 1630.026 kb on - strand, within CA264_07075 at 1630.051 kb on + strand, within CA264_07075 at 1630.137 kb on + strand, within CA264_07075 at 1630.137 kb on + strand, within CA264_07075 at 1630.137 kb on + strand, within CA264_07075 at 1630.138 kb on - strand, within CA264_07075 at 1630.185 kb on + strand, within CA264_07075 at 1630.186 kb on - strand, within CA264_07075 at 1630.269 kb on + strand at 1630.270 kb on - strand at 1630.299 kb on + strand at 1630.317 kb on + strand at 1630.318 kb on - strand at 1630.341 kb on - strand at 1630.346 kb on + strand at 1630.346 kb on + strand at 1630.347 kb on - strand at 1630.347 kb on - strand at 1630.348 kb on + strand at 1630.348 kb on + strand at 1630.370 kb on + strand at 1630.371 kb on - strand at 1630.427 kb on + strand at 1630.442 kb on + strand at 1630.443 kb on - strand at 1630.444 kb on + strand at 1630.452 kb on - strand at 1630.491 kb on - strand at 1630.558 kb on + strand at 1630.620 kb on - strand at 1630.649 kb on + strand at 1630.653 kb on + strand at 1630.653 kb on + strand at 1630.655 kb on + strand at 1630.656 kb on - strand at 1630.656 kb on - strand at 1630.656 kb on - strand at 1630.656 kb on - strand at 1630.660 kb on - strand at 1630.660 kb on - strand at 1630.660 kb on - strand at 1630.660 kb on - strand at 1630.660 kb on - strand at 1630.660 kb on - strand at 1630.660 kb on - strand at 1630.660 kb on - strand at 1630.661 kb on + strand at 1630.661 kb on + strand at 1630.662 kb on - strand at 1630.662 kb on - strand at 1630.665 kb on + strand at 1630.666 kb on - strand at 1630.666 kb on - strand at 1630.666 kb on - strand at 1630.699 kb on + strand at 1630.704 kb on - strand at 1630.714 kb on - strand at 1630.734 kb on + strand at 1630.896 kb on + strand, within CA264_07080 at 1630.932 kb on - strand, within CA264_07080 at 1631.065 kb on + strand, within CA264_07080 at 1631.077 kb on - strand, within CA264_07080 at 1631.077 kb on - strand, within CA264_07080 at 1631.077 kb on - strand, within CA264_07080 at 1631.085 kb on + strand, within CA264_07080 at 1631.113 kb on - strand, within CA264_07080 at 1631.146 kb on + strand, within CA264_07080 at 1631.147 kb on - strand, within CA264_07080 at 1631.151 kb on + strand, within CA264_07080 at 1631.211 kb on + strand, within CA264_07080 at 1631.212 kb on - strand, within CA264_07080
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 1,628,968 + +0.1 1,629,286 + CA264_07070 0.23 +1.2 1,629,287 - CA264_07070 0.23 +1.6 1,629,462 + CA264_07070 0.54 +0.1 1,629,473 + CA264_07070 0.56 +0.3 1,629,473 + CA264_07070 0.56 -1.5 1,629,474 - CA264_07070 0.57 +1.7 1,629,474 - CA264_07070 0.57 +1.9 1,629,702 - +0.8 1,629,742 + +0.2 1,629,743 - +1.9 1,629,743 - +1.3 1,629,743 - +0.7 1,629,747 + -1.2 1,629,798 + -0.8 1,629,856 + +0.2 1,629,856 + -0.5 1,629,857 - +1.3 1,629,857 - +1.1 1,629,857 - +1.1 1,629,857 - +1.1 1,629,860 + -0.5 1,629,860 + +0.2 1,629,860 + +0.2 1,629,860 + +0.1 1,629,860 + +0.0 1,629,861 - +1.8 1,629,861 - -0.2 1,629,861 - +1.8 1,629,870 - +2.8 1,629,880 - +1.6 1,629,880 - +1.3 1,629,880 - -0.4 1,629,888 + +1.0 1,629,888 + -2.0 1,630,005 + CA264_07075 0.17 -0.1 1,630,005 + CA264_07075 0.17 -0.5 1,630,026 - CA264_07075 0.24 +0.0 1,630,051 + CA264_07075 0.32 -1.0 1,630,137 + CA264_07075 0.60 -0.4 1,630,137 + CA264_07075 0.60 -0.4 1,630,137 + CA264_07075 0.60 -0.0 1,630,138 - CA264_07075 0.61 -0.2 1,630,185 + CA264_07075 0.76 +0.3 1,630,186 - CA264_07075 0.76 +0.1 1,630,269 + +0.1 1,630,270 - -0.8 1,630,299 + -0.7 1,630,317 + +0.0 1,630,318 - +0.0 1,630,341 - +0.8 1,630,346 + +0.2 1,630,346 + -0.7 1,630,347 - -0.5 1,630,347 - -0.2 1,630,348 + -1.0 1,630,348 + -2.0 1,630,370 + +0.5 1,630,371 - +1.2 1,630,427 + -0.9 1,630,442 + -0.0 1,630,443 - -0.6 1,630,444 + -2.4 1,630,452 - -0.5 1,630,491 - +0.1 1,630,558 + +2.0 1,630,620 - +0.1 1,630,649 + -0.4 1,630,653 + +0.1 1,630,653 + +0.2 1,630,655 + +0.2 1,630,656 - -0.9 1,630,656 - +0.0 1,630,656 - -1.2 1,630,656 - -1.0 1,630,660 - +0.2 1,630,660 - -0.1 1,630,660 - -0.6 1,630,660 - -0.4 1,630,660 - +0.3 1,630,660 - -0.7 1,630,660 - +0.3 1,630,660 - +0.3 1,630,661 + +0.7 1,630,661 + -0.2 1,630,662 - -1.9 1,630,662 - -1.3 1,630,665 + +0.4 1,630,666 - -0.7 1,630,666 - -0.3 1,630,666 - -0.6 1,630,699 + +0.3 1,630,704 - -0.7 1,630,714 - -1.9 1,630,734 + +0.5 1,630,896 + CA264_07080 0.24 -0.4 1,630,932 - CA264_07080 0.28 -1.2 1,631,065 + CA264_07080 0.43 -0.9 1,631,077 - CA264_07080 0.44 -1.2 1,631,077 - CA264_07080 0.44 +1.1 1,631,077 - CA264_07080 0.44 -1.1 1,631,085 + CA264_07080 0.45 -0.8 1,631,113 - CA264_07080 0.48 +0.2 1,631,146 + CA264_07080 0.52 +0.3 1,631,147 - CA264_07080 0.52 -0.0 1,631,151 + CA264_07080 0.52 -0.4 1,631,211 + CA264_07080 0.59 -0.4 1,631,212 - CA264_07080 0.59 -1.6
Or see this region's nucleotide sequence