Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_06995

Experiment: m.b. Thallium(I) acetate 0.001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_06990 and CA264_06995 are separated by 1 nucleotidesCA264_06995 and CA264_07000 are separated by 6 nucleotidesCA264_07000 and CA264_07005 are separated by 14 nucleotides CA264_06990: CA264_06990 - PA-phosphatase, at 1,613,027 to 1,613,977 _06990 CA264_06995: CA264_06995 - fatty acid hydroxylase, at 1,613,979 to 1,614,599 _06995 CA264_07000: CA264_07000 - DUF4833 domain-containing protein, at 1,614,606 to 1,615,172 _07000 CA264_07005: CA264_07005 - CDP-diacylglycerol--inositol 3-phosphatidyltransferase, at 1,615,187 to 1,615,906 _07005 Position (kb) 1613 1614 1615Strain fitness (log2 ratio) -1 0 1 2 3 4at 1612.980 kb on - strandat 1612.991 kb on - strandat 1612.991 kb on - strandat 1613.067 kb on - strandat 1613.074 kb on + strandat 1613.074 kb on + strandat 1613.075 kb on - strandat 1613.126 kb on - strand, within CA264_06990at 1613.138 kb on + strand, within CA264_06990at 1613.139 kb on - strand, within CA264_06990at 1613.151 kb on + strand, within CA264_06990at 1613.151 kb on + strand, within CA264_06990at 1613.152 kb on - strand, within CA264_06990at 1613.165 kb on - strand, within CA264_06990at 1613.166 kb on + strand, within CA264_06990at 1613.189 kb on + strand, within CA264_06990at 1613.189 kb on + strand, within CA264_06990at 1613.189 kb on + strand, within CA264_06990at 1613.190 kb on - strand, within CA264_06990at 1613.195 kb on - strand, within CA264_06990at 1613.195 kb on - strand, within CA264_06990at 1613.195 kb on - strand, within CA264_06990at 1613.222 kb on + strand, within CA264_06990at 1613.224 kb on + strand, within CA264_06990at 1613.225 kb on - strand, within CA264_06990at 1613.228 kb on + strand, within CA264_06990at 1613.229 kb on - strand, within CA264_06990at 1613.229 kb on - strand, within CA264_06990at 1613.229 kb on - strand, within CA264_06990at 1613.233 kb on + strand, within CA264_06990at 1613.247 kb on + strand, within CA264_06990at 1613.250 kb on + strand, within CA264_06990at 1613.329 kb on + strand, within CA264_06990at 1613.339 kb on - strand, within CA264_06990at 1613.377 kb on + strand, within CA264_06990at 1613.420 kb on + strand, within CA264_06990at 1613.420 kb on + strand, within CA264_06990at 1613.421 kb on - strand, within CA264_06990at 1613.421 kb on - strand, within CA264_06990at 1613.421 kb on - strand, within CA264_06990at 1613.421 kb on - strand, within CA264_06990at 1613.421 kb on - strand, within CA264_06990at 1613.421 kb on - strand, within CA264_06990at 1613.452 kb on - strand, within CA264_06990at 1613.455 kb on - strand, within CA264_06990at 1613.455 kb on - strand, within CA264_06990at 1613.477 kb on + strand, within CA264_06990at 1613.478 kb on - strand, within CA264_06990at 1613.592 kb on - strand, within CA264_06990at 1613.642 kb on + strand, within CA264_06990at 1613.642 kb on + strand, within CA264_06990at 1613.642 kb on + strand, within CA264_06990at 1613.688 kb on + strand, within CA264_06990at 1613.689 kb on - strand, within CA264_06990at 1613.722 kb on - strand, within CA264_06990at 1613.742 kb on + strand, within CA264_06990at 1613.743 kb on - strand, within CA264_06990at 1613.748 kb on + strand, within CA264_06990at 1613.818 kb on - strand, within CA264_06990at 1613.828 kb on + strand, within CA264_06990at 1613.829 kb on - strand, within CA264_06990at 1613.970 kb on - strandat 1614.030 kb on + strandat 1614.108 kb on - strand, within CA264_06995at 1614.131 kb on - strand, within CA264_06995at 1614.154 kb on + strand, within CA264_06995at 1614.184 kb on + strand, within CA264_06995at 1614.185 kb on - strand, within CA264_06995at 1614.481 kb on - strand, within CA264_06995at 1614.494 kb on - strand, within CA264_06995at 1614.494 kb on - strand, within CA264_06995at 1614.494 kb on - strand, within CA264_06995at 1614.512 kb on + strand, within CA264_06995at 1614.513 kb on - strand, within CA264_06995at 1614.514 kb on + strand, within CA264_06995at 1614.514 kb on + strand, within CA264_06995at 1614.514 kb on + strand, within CA264_06995at 1614.519 kb on + strand, within CA264_06995at 1614.519 kb on + strand, within CA264_06995at 1614.520 kb on - strand, within CA264_06995at 1614.547 kb on + strandat 1614.547 kb on + strandat 1614.548 kb on - strandat 1614.551 kb on + strandat 1614.551 kb on + strandat 1614.551 kb on + strandat 1614.552 kb on - strandat 1614.614 kb on + strandat 1614.666 kb on + strand, within CA264_07000at 1614.667 kb on - strand, within CA264_07000at 1614.667 kb on - strand, within CA264_07000at 1614.670 kb on + strand, within CA264_07000at 1614.670 kb on + strand, within CA264_07000at 1614.671 kb on - strand, within CA264_07000at 1614.758 kb on - strand, within CA264_07000at 1614.766 kb on + strand, within CA264_07000at 1614.766 kb on + strand, within CA264_07000at 1614.767 kb on - strand, within CA264_07000at 1614.767 kb on - strand, within CA264_07000at 1614.833 kb on - strand, within CA264_07000at 1614.890 kb on - strand, within CA264_07000at 1614.922 kb on + strand, within CA264_07000at 1614.991 kb on + strand, within CA264_07000at 1614.991 kb on + strand, within CA264_07000at 1614.992 kb on - strand, within CA264_07000at 1615.068 kb on - strand, within CA264_07000at 1615.068 kb on - strand, within CA264_07000at 1615.132 kb on + strandat 1615.132 kb on + strandat 1615.152 kb on + strandat 1615.182 kb on + strandat 1615.189 kb on - strandat 1615.338 kb on + strand, within CA264_07005at 1615.340 kb on + strand, within CA264_07005at 1615.340 kb on + strand, within CA264_07005at 1615.341 kb on - strand, within CA264_07005at 1615.346 kb on - strand, within CA264_07005at 1615.348 kb on - strand, within CA264_07005at 1615.348 kb on - strand, within CA264_07005at 1615.368 kb on + strand, within CA264_07005at 1615.442 kb on - strand, within CA264_07005at 1615.480 kb on - strand, within CA264_07005at 1615.484 kb on + strand, within CA264_07005at 1615.484 kb on + strand, within CA264_07005at 1615.484 kb on + strand, within CA264_07005at 1615.484 kb on + strand, within CA264_07005at 1615.484 kb on + strand, within CA264_07005at 1615.485 kb on - strand, within CA264_07005at 1615.571 kb on - strand, within CA264_07005

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml
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1,612,980 - +0.6
1,612,991 - +0.3
1,612,991 - +0.4
1,613,067 - +1.6
1,613,074 + +2.7
1,613,074 + +3.0
1,613,075 - +1.4
1,613,126 - CA264_06990 0.10 +1.6
1,613,138 + CA264_06990 0.12 +2.5
1,613,139 - CA264_06990 0.12 +0.3
1,613,151 + CA264_06990 0.13 +1.5
1,613,151 + CA264_06990 0.13 +2.7
1,613,152 - CA264_06990 0.13 +1.4
1,613,165 - CA264_06990 0.15 +0.9
1,613,166 + CA264_06990 0.15 +2.7
1,613,189 + CA264_06990 0.17 +3.0
1,613,189 + CA264_06990 0.17 +2.6
1,613,189 + CA264_06990 0.17 +3.1
1,613,190 - CA264_06990 0.17 +1.6
1,613,195 - CA264_06990 0.18 +1.6
1,613,195 - CA264_06990 0.18 +1.8
1,613,195 - CA264_06990 0.18 +2.0
1,613,222 + CA264_06990 0.21 +2.9
1,613,224 + CA264_06990 0.21 +2.8
1,613,225 - CA264_06990 0.21 +1.7
1,613,228 + CA264_06990 0.21 +2.5
1,613,229 - CA264_06990 0.21 +1.8
1,613,229 - CA264_06990 0.21 +1.4
1,613,229 - CA264_06990 0.21 +1.5
1,613,233 + CA264_06990 0.22 +3.7
1,613,247 + CA264_06990 0.23 +2.2
1,613,250 + CA264_06990 0.23 +3.3
1,613,329 + CA264_06990 0.32 +2.8
1,613,339 - CA264_06990 0.33 +2.6
1,613,377 + CA264_06990 0.37 +2.9
1,613,420 + CA264_06990 0.41 +2.8
1,613,420 + CA264_06990 0.41 +3.1
1,613,421 - CA264_06990 0.41 +1.6
1,613,421 - CA264_06990 0.41 +1.6
1,613,421 - CA264_06990 0.41 +2.1
1,613,421 - CA264_06990 0.41 +1.3
1,613,421 - CA264_06990 0.41 +1.8
1,613,421 - CA264_06990 0.41 +1.2
1,613,452 - CA264_06990 0.45 +1.7
1,613,455 - CA264_06990 0.45 +2.6
1,613,455 - CA264_06990 0.45 +2.1
1,613,477 + CA264_06990 0.47 +2.5
1,613,478 - CA264_06990 0.47 +1.4
1,613,592 - CA264_06990 0.59 +1.2
1,613,642 + CA264_06990 0.65 +3.4
1,613,642 + CA264_06990 0.65 +2.1
1,613,642 + CA264_06990 0.65 +3.5
1,613,688 + CA264_06990 0.70 +3.6
1,613,689 - CA264_06990 0.70 +2.8
1,613,722 - CA264_06990 0.73 +4.3
1,613,742 + CA264_06990 0.75 +3.3
1,613,743 - CA264_06990 0.75 +2.2
1,613,748 + CA264_06990 0.76 +3.9
1,613,818 - CA264_06990 0.83 +2.9
1,613,828 + CA264_06990 0.84 +3.9
1,613,829 - CA264_06990 0.84 +2.0
1,613,970 - +2.9
1,614,030 + +1.1
1,614,108 - CA264_06995 0.21 +1.5
1,614,131 - CA264_06995 0.24 +1.5
1,614,154 + CA264_06995 0.28 +1.1
1,614,184 + CA264_06995 0.33 +0.8
1,614,185 - CA264_06995 0.33 +0.7
1,614,481 - CA264_06995 0.81 +0.1
1,614,494 - CA264_06995 0.83 +1.0
1,614,494 - CA264_06995 0.83 +0.9
1,614,494 - CA264_06995 0.83 +0.2
1,614,512 + CA264_06995 0.86 +2.3
1,614,513 - CA264_06995 0.86 +0.0
1,614,514 + CA264_06995 0.86 +2.2
1,614,514 + CA264_06995 0.86 +1.4
1,614,514 + CA264_06995 0.86 +2.4
1,614,519 + CA264_06995 0.87 +1.7
1,614,519 + CA264_06995 0.87 +2.0
1,614,520 - CA264_06995 0.87 +0.3
1,614,547 + +0.8
1,614,547 + +1.2
1,614,548 - -0.6
1,614,551 + +2.0
1,614,551 + +2.3
1,614,551 + +1.8
1,614,552 - +1.3
1,614,614 + +1.0
1,614,666 + CA264_07000 0.11 +1.6
1,614,667 - CA264_07000 0.11 -0.5
1,614,667 - CA264_07000 0.11 -0.3
1,614,670 + CA264_07000 0.11 +0.8
1,614,670 + CA264_07000 0.11 +1.0
1,614,671 - CA264_07000 0.11 -0.4
1,614,758 - CA264_07000 0.27 +0.7
1,614,766 + CA264_07000 0.28 +1.0
1,614,766 + CA264_07000 0.28 +0.5
1,614,767 - CA264_07000 0.28 +1.0
1,614,767 - CA264_07000 0.28 +0.6
1,614,833 - CA264_07000 0.40 +0.3
1,614,890 - CA264_07000 0.50 +0.2
1,614,922 + CA264_07000 0.56 +1.0
1,614,991 + CA264_07000 0.68 +1.2
1,614,991 + CA264_07000 0.68 +1.3
1,614,992 - CA264_07000 0.68 +0.3
1,615,068 - CA264_07000 0.81 +0.5
1,615,068 - CA264_07000 0.81 -0.1
1,615,132 + +0.9
1,615,132 + +0.8
1,615,152 + +1.2
1,615,182 + +1.1
1,615,189 - +1.1
1,615,338 + CA264_07005 0.21 +1.3
1,615,340 + CA264_07005 0.21 +1.3
1,615,340 + CA264_07005 0.21 +1.8
1,615,341 - CA264_07005 0.21 +0.6
1,615,346 - CA264_07005 0.22 +1.1
1,615,348 - CA264_07005 0.22 +1.1
1,615,348 - CA264_07005 0.22 +3.5
1,615,368 + CA264_07005 0.25 +3.3
1,615,442 - CA264_07005 0.35 +1.0
1,615,480 - CA264_07005 0.41 +0.6
1,615,484 + CA264_07005 0.41 +1.4
1,615,484 + CA264_07005 0.41 +1.2
1,615,484 + CA264_07005 0.41 +1.5
1,615,484 + CA264_07005 0.41 +0.8
1,615,484 + CA264_07005 0.41 +0.9
1,615,485 - CA264_07005 0.41 +1.2
1,615,571 - CA264_07005 0.53 +1.2

Or see this region's nucleotide sequence