Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06710 and CA264_06715 are separated by 61 nucleotides CA264_06715 and CA264_06720 are separated by 12 nucleotides
CA264_06710: CA264_06710 - hypothetical protein, at 1,549,928 to 1,551,613
_06710
CA264_06715: CA264_06715 - xylose isomerase, at 1,551,675 to 1,552,637
_06715
CA264_06720: CA264_06720 - RagB/SusD family nutrient uptake outer membrane protein, at 1,552,650 to 1,554,386
_06720
Position (kb)
1551
1552
1553 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1550.721 kb on + strand, within CA264_06710 at 1550.750 kb on - strand, within CA264_06710 at 1550.756 kb on + strand, within CA264_06710 at 1550.767 kb on + strand, within CA264_06710 at 1550.772 kb on - strand, within CA264_06710 at 1550.772 kb on - strand, within CA264_06710 at 1550.815 kb on - strand, within CA264_06710 at 1550.815 kb on - strand, within CA264_06710 at 1550.888 kb on + strand, within CA264_06710 at 1550.949 kb on + strand, within CA264_06710 at 1550.950 kb on - strand, within CA264_06710 at 1551.048 kb on + strand, within CA264_06710 at 1551.101 kb on + strand, within CA264_06710 at 1551.121 kb on - strand, within CA264_06710 at 1551.121 kb on - strand, within CA264_06710 at 1551.204 kb on + strand, within CA264_06710 at 1551.234 kb on + strand, within CA264_06710 at 1551.234 kb on + strand, within CA264_06710 at 1551.235 kb on - strand, within CA264_06710 at 1551.235 kb on - strand, within CA264_06710 at 1551.235 kb on - strand, within CA264_06710 at 1551.235 kb on - strand, within CA264_06710 at 1551.235 kb on - strand, within CA264_06710 at 1551.238 kb on + strand, within CA264_06710 at 1551.238 kb on + strand, within CA264_06710 at 1551.239 kb on - strand, within CA264_06710 at 1551.239 kb on - strand, within CA264_06710 at 1551.239 kb on - strand, within CA264_06710 at 1551.314 kb on - strand, within CA264_06710 at 1551.314 kb on - strand, within CA264_06710 at 1551.504 kb on - strand at 1551.535 kb on + strand at 1551.557 kb on + strand at 1551.557 kb on + strand at 1551.557 kb on + strand at 1551.557 kb on + strand at 1551.558 kb on - strand at 1551.572 kb on + strand at 1551.573 kb on - strand at 1551.573 kb on - strand at 1551.628 kb on + strand at 1551.628 kb on + strand at 1551.677 kb on - strand at 1551.677 kb on - strand at 1551.691 kb on + strand at 1551.700 kb on + strand at 1551.712 kb on + strand at 1551.713 kb on - strand at 1551.723 kb on + strand at 1551.742 kb on + strand at 1551.754 kb on + strand at 1551.754 kb on + strand at 1551.754 kb on + strand at 1551.755 kb on - strand at 1551.755 kb on - strand at 1551.772 kb on + strand, within CA264_06715 at 1551.798 kb on + strand, within CA264_06715 at 1551.933 kb on - strand, within CA264_06715 at 1551.945 kb on + strand, within CA264_06715 at 1551.945 kb on + strand, within CA264_06715 at 1551.946 kb on - strand, within CA264_06715 at 1552.155 kb on + strand, within CA264_06715 at 1552.155 kb on + strand, within CA264_06715 at 1552.165 kb on + strand, within CA264_06715 at 1552.166 kb on - strand, within CA264_06715 at 1552.168 kb on + strand, within CA264_06715 at 1552.169 kb on - strand, within CA264_06715 at 1552.203 kb on + strand, within CA264_06715 at 1552.204 kb on - strand, within CA264_06715 at 1552.242 kb on + strand, within CA264_06715 at 1552.265 kb on + strand, within CA264_06715 at 1552.295 kb on - strand, within CA264_06715 at 1552.315 kb on - strand, within CA264_06715 at 1552.315 kb on - strand, within CA264_06715 at 1552.438 kb on + strand, within CA264_06715 at 1552.462 kb on + strand, within CA264_06715 at 1552.539 kb on - strand, within CA264_06715 at 1552.569 kb on - strand at 1552.593 kb on + strand at 1552.608 kb on + strand at 1552.609 kb on - strand at 1552.643 kb on - strand at 1552.720 kb on + strand at 1552.808 kb on + strand at 1552.808 kb on + strand at 1552.808 kb on + strand at 1552.809 kb on - strand at 1552.811 kb on + strand at 1552.811 kb on + strand at 1552.862 kb on - strand, within CA264_06720 at 1552.915 kb on + strand, within CA264_06720 at 1552.915 kb on + strand, within CA264_06720 at 1552.915 kb on + strand, within CA264_06720 at 1552.915 kb on + strand, within CA264_06720 at 1552.920 kb on - strand, within CA264_06720 at 1553.080 kb on + strand, within CA264_06720 at 1553.153 kb on + strand, within CA264_06720 at 1553.153 kb on + strand, within CA264_06720 at 1553.302 kb on + strand, within CA264_06720 at 1553.420 kb on - strand, within CA264_06720 at 1553.453 kb on + strand, within CA264_06720 at 1553.453 kb on + strand, within CA264_06720 at 1553.479 kb on + strand, within CA264_06720 at 1553.480 kb on - strand at 1553.487 kb on + strand, within CA264_06720 at 1553.490 kb on + strand, within CA264_06720 at 1553.490 kb on + strand, within CA264_06720
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 1,550,721 + CA264_06710 0.47 -0.6 1,550,750 - CA264_06710 0.49 +1.3 1,550,756 + CA264_06710 0.49 +0.1 1,550,767 + CA264_06710 0.50 -0.1 1,550,772 - CA264_06710 0.50 +0.0 1,550,772 - CA264_06710 0.50 -0.5 1,550,815 - CA264_06710 0.53 +0.6 1,550,815 - CA264_06710 0.53 -1.1 1,550,888 + CA264_06710 0.57 +0.3 1,550,949 + CA264_06710 0.61 -0.3 1,550,950 - CA264_06710 0.61 -0.4 1,551,048 + CA264_06710 0.66 -0.1 1,551,101 + CA264_06710 0.70 -0.3 1,551,121 - CA264_06710 0.71 -0.9 1,551,121 - CA264_06710 0.71 -0.5 1,551,204 + CA264_06710 0.76 -0.0 1,551,234 + CA264_06710 0.77 +0.9 1,551,234 + CA264_06710 0.77 -0.5 1,551,235 - CA264_06710 0.78 -0.8 1,551,235 - CA264_06710 0.78 +0.4 1,551,235 - CA264_06710 0.78 -1.2 1,551,235 - CA264_06710 0.78 +0.3 1,551,235 - CA264_06710 0.78 +0.2 1,551,238 + CA264_06710 0.78 -0.3 1,551,238 + CA264_06710 0.78 +0.4 1,551,239 - CA264_06710 0.78 -0.3 1,551,239 - CA264_06710 0.78 -0.4 1,551,239 - CA264_06710 0.78 -1.4 1,551,314 - CA264_06710 0.82 -0.0 1,551,314 - CA264_06710 0.82 +0.6 1,551,504 - -0.8 1,551,535 + -0.1 1,551,557 + -1.2 1,551,557 + +2.0 1,551,557 + -0.5 1,551,557 + -0.1 1,551,558 - -0.7 1,551,572 + +0.8 1,551,573 - -0.7 1,551,573 - -0.7 1,551,628 + -0.2 1,551,628 + -0.8 1,551,677 - -0.9 1,551,677 - +0.5 1,551,691 + -1.7 1,551,700 + +0.1 1,551,712 + -0.7 1,551,713 - -0.8 1,551,723 + +0.7 1,551,742 + -0.2 1,551,754 + -1.7 1,551,754 + -1.2 1,551,754 + -0.2 1,551,755 - +0.1 1,551,755 - +0.8 1,551,772 + CA264_06715 0.10 -1.1 1,551,798 + CA264_06715 0.13 -0.5 1,551,933 - CA264_06715 0.27 +1.2 1,551,945 + CA264_06715 0.28 -0.1 1,551,945 + CA264_06715 0.28 +0.6 1,551,946 - CA264_06715 0.28 +0.3 1,552,155 + CA264_06715 0.50 +0.2 1,552,155 + CA264_06715 0.50 +1.2 1,552,165 + CA264_06715 0.51 -0.0 1,552,166 - CA264_06715 0.51 +0.8 1,552,168 + CA264_06715 0.51 -0.1 1,552,169 - CA264_06715 0.51 -0.0 1,552,203 + CA264_06715 0.55 -0.8 1,552,204 - CA264_06715 0.55 -0.8 1,552,242 + CA264_06715 0.59 +1.0 1,552,265 + CA264_06715 0.61 +0.2 1,552,295 - CA264_06715 0.64 -1.8 1,552,315 - CA264_06715 0.66 -0.1 1,552,315 - CA264_06715 0.66 -0.4 1,552,438 + CA264_06715 0.79 -0.6 1,552,462 + CA264_06715 0.82 -1.1 1,552,539 - CA264_06715 0.90 +0.3 1,552,569 - -0.5 1,552,593 + -0.3 1,552,608 + -0.3 1,552,609 - -0.1 1,552,643 - +0.0 1,552,720 + -0.6 1,552,808 + +0.3 1,552,808 + +0.5 1,552,808 + -1.0 1,552,809 - +0.8 1,552,811 + -0.2 1,552,811 + -0.2 1,552,862 - CA264_06720 0.12 -0.8 1,552,915 + CA264_06720 0.15 -0.5 1,552,915 + CA264_06720 0.15 -0.4 1,552,915 + CA264_06720 0.15 -0.5 1,552,915 + CA264_06720 0.15 -0.9 1,552,920 - CA264_06720 0.16 +0.3 1,553,080 + CA264_06720 0.25 -0.7 1,553,153 + CA264_06720 0.29 +0.8 1,553,153 + CA264_06720 0.29 +1.6 1,553,302 + CA264_06720 0.38 +1.3 1,553,420 - CA264_06720 0.44 +0.6 1,553,453 + CA264_06720 0.46 +0.7 1,553,453 + CA264_06720 0.46 +0.1 1,553,479 + CA264_06720 0.48 +0.5 1,553,480 - +3.1 1,553,487 + CA264_06720 0.48 +1.7 1,553,490 + CA264_06720 0.48 +1.1 1,553,490 + CA264_06720 0.48 -1.1
Or see this region's nucleotide sequence