Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_06695

Experiment: m.b. Thallium(I) acetate 0.001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_06690 and CA264_06695 are separated by 631 nucleotidesCA264_06695 and CA264_06700 are separated by 37 nucleotidesCA264_06700 and CA264_06705 are separated by 51 nucleotides CA264_06690: CA264_06690 - 16S ribosomal RNA, at 1,544,299 to 1,545,819 _06690 CA264_06695: CA264_06695 - hydrolase, at 1,546,451 to 1,547,542 _06695 CA264_06700: CA264_06700 - hypothetical protein, at 1,547,580 to 1,548,464 _06700 CA264_06705: CA264_06705 - hypothetical protein, at 1,548,516 to 1,549,766 _06705 Position (kb) 1546 1547 1548Strain fitness (log2 ratio) -2 -1 0 1 2at 1545.895 kb on - strandat 1546.201 kb on + strandat 1546.213 kb on + strandat 1546.223 kb on + strandat 1546.268 kb on + strandat 1546.271 kb on + strandat 1546.272 kb on - strandat 1546.353 kb on + strandat 1546.353 kb on + strandat 1546.353 kb on + strandat 1546.353 kb on + strandat 1546.364 kb on - strandat 1546.383 kb on + strandat 1546.383 kb on + strandat 1546.386 kb on - strandat 1546.453 kb on - strandat 1546.477 kb on + strandat 1546.478 kb on - strandat 1546.478 kb on - strandat 1546.481 kb on + strandat 1546.481 kb on + strandat 1546.591 kb on - strand, within CA264_06695at 1546.612 kb on + strand, within CA264_06695at 1546.613 kb on - strand, within CA264_06695at 1546.717 kb on + strand, within CA264_06695at 1546.717 kb on + strand, within CA264_06695at 1546.718 kb on - strand, within CA264_06695at 1546.776 kb on + strand, within CA264_06695at 1546.777 kb on - strand, within CA264_06695at 1546.777 kb on - strand, within CA264_06695at 1546.951 kb on - strand, within CA264_06695at 1547.001 kb on + strand, within CA264_06695at 1547.001 kb on + strand, within CA264_06695at 1547.002 kb on - strand, within CA264_06695at 1547.042 kb on + strand, within CA264_06695at 1547.043 kb on - strand, within CA264_06695at 1547.043 kb on - strand, within CA264_06695at 1547.066 kb on + strand, within CA264_06695at 1547.081 kb on + strand, within CA264_06695at 1547.103 kb on + strand, within CA264_06695at 1547.150 kb on - strand, within CA264_06695at 1547.150 kb on - strand, within CA264_06695at 1547.151 kb on + strand, within CA264_06695at 1547.151 kb on + strand, within CA264_06695at 1547.152 kb on - strand, within CA264_06695at 1547.158 kb on + strand, within CA264_06695at 1547.159 kb on - strand, within CA264_06695at 1547.213 kb on + strand, within CA264_06695at 1547.215 kb on + strand, within CA264_06695at 1547.216 kb on - strand, within CA264_06695at 1547.217 kb on + strand, within CA264_06695at 1547.218 kb on - strand, within CA264_06695at 1547.235 kb on + strand, within CA264_06695at 1547.235 kb on + strand, within CA264_06695at 1547.235 kb on + strand, within CA264_06695at 1547.236 kb on - strand, within CA264_06695at 1547.267 kb on - strand, within CA264_06695at 1547.269 kb on + strand, within CA264_06695at 1547.270 kb on - strand, within CA264_06695at 1547.279 kb on - strand, within CA264_06695at 1547.279 kb on - strand, within CA264_06695at 1547.302 kb on + strand, within CA264_06695at 1547.302 kb on + strand, within CA264_06695at 1547.302 kb on + strand, within CA264_06695at 1547.344 kb on + strand, within CA264_06695at 1547.344 kb on + strand, within CA264_06695at 1547.345 kb on - strand, within CA264_06695at 1547.385 kb on - strand, within CA264_06695at 1547.423 kb on + strand, within CA264_06695at 1547.460 kb on + strandat 1547.461 kb on - strandat 1547.461 kb on - strandat 1547.461 kb on - strandat 1547.504 kb on + strandat 1547.507 kb on - strandat 1547.507 kb on - strandat 1547.555 kb on + strandat 1547.555 kb on + strandat 1547.556 kb on - strandat 1547.597 kb on + strandat 1547.600 kb on + strandat 1547.600 kb on + strandat 1547.657 kb on - strandat 1547.724 kb on + strand, within CA264_06700at 1547.867 kb on + strand, within CA264_06700at 1547.880 kb on + strand, within CA264_06700at 1547.880 kb on + strand, within CA264_06700at 1547.904 kb on + strand, within CA264_06700at 1548.057 kb on - strand, within CA264_06700at 1548.060 kb on + strand, within CA264_06700at 1548.193 kb on + strand, within CA264_06700at 1548.287 kb on - strand, within CA264_06700at 1548.287 kb on - strand, within CA264_06700at 1548.296 kb on + strand, within CA264_06700at 1548.297 kb on - strand, within CA264_06700at 1548.517 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml
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1,545,895 - +0.3
1,546,201 + -0.0
1,546,213 + +0.5
1,546,223 + +0.0
1,546,268 + -0.2
1,546,271 + -1.0
1,546,272 - -0.1
1,546,353 + -0.8
1,546,353 + -0.1
1,546,353 + -0.3
1,546,353 + -0.7
1,546,364 - +0.2
1,546,383 + +0.2
1,546,383 + +2.1
1,546,386 - +0.0
1,546,453 - +0.8
1,546,477 + -0.1
1,546,478 - -1.0
1,546,478 - +0.0
1,546,481 + +1.5
1,546,481 + -0.5
1,546,591 - CA264_06695 0.13 +0.5
1,546,612 + CA264_06695 0.15 -1.1
1,546,613 - CA264_06695 0.15 +0.1
1,546,717 + CA264_06695 0.24 +0.1
1,546,717 + CA264_06695 0.24 -0.0
1,546,718 - CA264_06695 0.24 -1.6
1,546,776 + CA264_06695 0.30 +1.3
1,546,777 - CA264_06695 0.30 -0.3
1,546,777 - CA264_06695 0.30 -0.8
1,546,951 - CA264_06695 0.46 -0.4
1,547,001 + CA264_06695 0.50 -0.1
1,547,001 + CA264_06695 0.50 -0.2
1,547,002 - CA264_06695 0.50 +0.3
1,547,042 + CA264_06695 0.54 -0.8
1,547,043 - CA264_06695 0.54 +0.5
1,547,043 - CA264_06695 0.54 +0.2
1,547,066 + CA264_06695 0.56 -0.5
1,547,081 + CA264_06695 0.58 -0.4
1,547,103 + CA264_06695 0.60 +0.9
1,547,150 - CA264_06695 0.64 +0.2
1,547,150 - CA264_06695 0.64 +0.8
1,547,151 + CA264_06695 0.64 -0.3
1,547,151 + CA264_06695 0.64 -0.9
1,547,152 - CA264_06695 0.64 +0.0
1,547,158 + CA264_06695 0.65 -1.4
1,547,159 - CA264_06695 0.65 -1.4
1,547,213 + CA264_06695 0.70 +0.9
1,547,215 + CA264_06695 0.70 +0.6
1,547,216 - CA264_06695 0.70 -0.5
1,547,217 + CA264_06695 0.70 +0.1
1,547,218 - CA264_06695 0.70 +1.5
1,547,235 + CA264_06695 0.72 -0.4
1,547,235 + CA264_06695 0.72 -0.5
1,547,235 + CA264_06695 0.72 -2.1
1,547,236 - CA264_06695 0.72 +0.4
1,547,267 - CA264_06695 0.75 -0.3
1,547,269 + CA264_06695 0.75 +2.1
1,547,270 - CA264_06695 0.75 +0.2
1,547,279 - CA264_06695 0.76 +0.0
1,547,279 - CA264_06695 0.76 +0.4
1,547,302 + CA264_06695 0.78 +0.4
1,547,302 + CA264_06695 0.78 +0.0
1,547,302 + CA264_06695 0.78 -0.2
1,547,344 + CA264_06695 0.82 -1.7
1,547,344 + CA264_06695 0.82 -0.0
1,547,345 - CA264_06695 0.82 -0.8
1,547,385 - CA264_06695 0.86 +0.2
1,547,423 + CA264_06695 0.89 -0.7
1,547,460 + -1.0
1,547,461 - -1.2
1,547,461 - -0.1
1,547,461 - +0.2
1,547,504 + -1.1
1,547,507 - -0.1
1,547,507 - -0.7
1,547,555 + -1.6
1,547,555 + -0.3
1,547,556 - -0.2
1,547,597 + -0.0
1,547,600 + -0.7
1,547,600 + +0.0
1,547,657 - -0.0
1,547,724 + CA264_06700 0.16 -0.4
1,547,867 + CA264_06700 0.32 -0.5
1,547,880 + CA264_06700 0.34 -0.2
1,547,880 + CA264_06700 0.34 +0.3
1,547,904 + CA264_06700 0.37 +0.9
1,548,057 - CA264_06700 0.54 +0.9
1,548,060 + CA264_06700 0.54 +0.5
1,548,193 + CA264_06700 0.69 +0.2
1,548,287 - CA264_06700 0.80 +0.0
1,548,287 - CA264_06700 0.80 -0.5
1,548,296 + CA264_06700 0.81 +0.2
1,548,297 - CA264_06700 0.81 +0.5
1,548,517 + +0.1

Or see this region's nucleotide sequence