Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_05690

Experiment: m.b. Thallium(I) acetate 0.001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_05685 and CA264_05690 overlap by 11 nucleotidesCA264_05690 and CA264_05695 are separated by 10 nucleotides CA264_05685: CA264_05685 - RNA polymerase subunit sigma-70, at 1,321,991 to 1,322,524 _05685 CA264_05690: CA264_05690 - hypothetical protein, at 1,322,514 to 1,323,476 _05690 CA264_05695: CA264_05695 - hypothetical protein, at 1,323,487 to 1,324,605 _05695 Position (kb) 1322 1323 1324Strain fitness (log2 ratio) -2 -1 0 1 2at 1321.590 kb on + strandat 1321.640 kb on - strandat 1321.649 kb on + strandat 1321.650 kb on - strandat 1321.669 kb on + strandat 1321.682 kb on + strandat 1321.715 kb on + strandat 1321.715 kb on + strandat 1321.760 kb on + strandat 1321.834 kb on + strandat 1321.835 kb on - strandat 1321.840 kb on + strandat 1321.921 kb on - strandat 1321.921 kb on - strandat 1321.939 kb on + strandat 1321.940 kb on - strandat 1321.968 kb on - strandat 1321.971 kb on + strandat 1321.971 kb on + strandat 1321.972 kb on - strandat 1322.054 kb on + strand, within CA264_05685at 1322.078 kb on + strand, within CA264_05685at 1322.079 kb on - strand, within CA264_05685at 1322.144 kb on - strand, within CA264_05685at 1322.164 kb on - strand, within CA264_05685at 1322.258 kb on + strand, within CA264_05685at 1322.347 kb on - strand, within CA264_05685at 1322.347 kb on - strand, within CA264_05685at 1322.385 kb on + strand, within CA264_05685at 1322.385 kb on + strand, within CA264_05685at 1322.385 kb on + strand, within CA264_05685at 1322.385 kb on + strand, within CA264_05685at 1322.387 kb on + strand, within CA264_05685at 1322.388 kb on - strand, within CA264_05685at 1322.388 kb on - strand, within CA264_05685at 1322.394 kb on + strand, within CA264_05685at 1322.395 kb on - strand, within CA264_05685at 1322.415 kb on + strand, within CA264_05685at 1322.558 kb on - strandat 1322.715 kb on + strand, within CA264_05690at 1322.715 kb on + strand, within CA264_05690at 1322.716 kb on - strand, within CA264_05690at 1322.717 kb on + strand, within CA264_05690at 1322.727 kb on + strand, within CA264_05690at 1322.728 kb on - strand, within CA264_05690at 1322.728 kb on - strand, within CA264_05690at 1322.728 kb on - strand, within CA264_05690at 1322.744 kb on + strand, within CA264_05690at 1322.761 kb on + strand, within CA264_05690at 1322.761 kb on + strand, within CA264_05690at 1322.762 kb on - strand, within CA264_05690at 1322.875 kb on + strand, within CA264_05690

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml
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1,321,590 + -1.1
1,321,640 - -0.9
1,321,649 + +0.6
1,321,650 - -1.1
1,321,669 + -1.0
1,321,682 + +0.1
1,321,715 + -0.3
1,321,715 + -0.1
1,321,760 + +0.1
1,321,834 + +0.8
1,321,835 - +0.5
1,321,840 + +0.1
1,321,921 - -1.9
1,321,921 - +0.7
1,321,939 + +0.1
1,321,940 - -0.4
1,321,968 - -0.2
1,321,971 + +0.7
1,321,971 + +0.8
1,321,972 - +0.3
1,322,054 + CA264_05685 0.12 +0.2
1,322,078 + CA264_05685 0.16 -0.1
1,322,079 - CA264_05685 0.16 -1.1
1,322,144 - CA264_05685 0.29 -0.9
1,322,164 - CA264_05685 0.32 +0.6
1,322,258 + CA264_05685 0.50 -2.1
1,322,347 - CA264_05685 0.67 -0.7
1,322,347 - CA264_05685 0.67 +0.2
1,322,385 + CA264_05685 0.74 +1.6
1,322,385 + CA264_05685 0.74 +0.3
1,322,385 + CA264_05685 0.74 +0.0
1,322,385 + CA264_05685 0.74 +0.1
1,322,387 + CA264_05685 0.74 -0.4
1,322,388 - CA264_05685 0.74 -0.7
1,322,388 - CA264_05685 0.74 +0.4
1,322,394 + CA264_05685 0.75 +0.2
1,322,395 - CA264_05685 0.76 +0.7
1,322,415 + CA264_05685 0.79 +0.1
1,322,558 - -0.2
1,322,715 + CA264_05690 0.21 +0.1
1,322,715 + CA264_05690 0.21 +0.9
1,322,716 - CA264_05690 0.21 +0.4
1,322,717 + CA264_05690 0.21 -0.8
1,322,727 + CA264_05690 0.22 +0.2
1,322,728 - CA264_05690 0.22 +0.3
1,322,728 - CA264_05690 0.22 +0.6
1,322,728 - CA264_05690 0.22 -1.2
1,322,744 + CA264_05690 0.24 +0.8
1,322,761 + CA264_05690 0.26 +0.1
1,322,761 + CA264_05690 0.26 +0.7
1,322,762 - CA264_05690 0.26 +0.5
1,322,875 + CA264_05690 0.37 +2.2

Or see this region's nucleotide sequence