Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_05525

Experiment: m.b. Thallium(I) acetate 0.001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_05520 and CA264_05525 overlap by 4 nucleotidesCA264_05525 and CA264_05530 are separated by 246 nucleotides CA264_05520: CA264_05520 - AraC family transcriptional regulator, at 1,281,810 to 1,282,736 _05520 CA264_05525: CA264_05525 - oxidoreductase, at 1,282,733 to 1,283,794 _05525 CA264_05530: CA264_05530 - phosphoenolpyruvate carboxylase, at 1,284,041 to 1,286,626 _05530 Position (kb) 1282 1283 1284Strain fitness (log2 ratio) -2 -1 0 1at 1281.740 kb on - strandat 1281.743 kb on + strandat 1281.750 kb on + strandat 1281.758 kb on + strandat 1281.800 kb on - strandat 1281.891 kb on + strandat 1281.891 kb on + strandat 1281.891 kb on + strandat 1281.892 kb on - strandat 1281.894 kb on - strandat 1281.913 kb on + strand, within CA264_05520at 1282.271 kb on - strand, within CA264_05520at 1282.399 kb on - strand, within CA264_05520at 1282.415 kb on + strand, within CA264_05520at 1282.443 kb on + strand, within CA264_05520at 1282.443 kb on + strand, within CA264_05520at 1282.444 kb on - strand, within CA264_05520at 1282.460 kb on + strand, within CA264_05520at 1282.460 kb on + strand, within CA264_05520at 1282.548 kb on + strand, within CA264_05520at 1282.563 kb on + strand, within CA264_05520at 1282.563 kb on + strand, within CA264_05520at 1282.563 kb on + strand, within CA264_05520at 1282.638 kb on + strand, within CA264_05520at 1282.638 kb on + strand, within CA264_05520at 1282.639 kb on - strand, within CA264_05520at 1282.639 kb on - strand, within CA264_05520at 1282.639 kb on - strand, within CA264_05520at 1282.666 kb on - strandat 1282.693 kb on + strandat 1282.694 kb on - strandat 1282.745 kb on + strandat 1282.745 kb on + strandat 1282.787 kb on + strandat 1282.788 kb on - strandat 1282.788 kb on - strandat 1282.789 kb on + strandat 1282.789 kb on + strandat 1282.789 kb on + strandat 1282.821 kb on - strandat 1282.844 kb on + strand, within CA264_05525at 1282.844 kb on + strand, within CA264_05525at 1282.844 kb on + strand, within CA264_05525at 1282.854 kb on + strand, within CA264_05525at 1282.854 kb on + strand, within CA264_05525at 1282.855 kb on - strand, within CA264_05525at 1282.855 kb on - strand, within CA264_05525at 1282.878 kb on + strand, within CA264_05525at 1282.925 kb on + strand, within CA264_05525at 1283.035 kb on - strand, within CA264_05525at 1283.041 kb on + strand, within CA264_05525at 1283.099 kb on - strand, within CA264_05525at 1283.140 kb on + strand, within CA264_05525at 1283.199 kb on - strand, within CA264_05525at 1283.237 kb on + strand, within CA264_05525at 1283.262 kb on - strand, within CA264_05525at 1283.262 kb on - strand, within CA264_05525at 1283.309 kb on + strand, within CA264_05525at 1283.310 kb on - strand, within CA264_05525at 1283.349 kb on - strand, within CA264_05525at 1283.384 kb on - strand, within CA264_05525at 1283.396 kb on - strand, within CA264_05525at 1283.424 kb on + strand, within CA264_05525at 1283.426 kb on + strand, within CA264_05525at 1283.495 kb on - strand, within CA264_05525at 1283.507 kb on + strand, within CA264_05525at 1283.508 kb on - strand, within CA264_05525at 1283.576 kb on + strand, within CA264_05525at 1283.577 kb on - strand, within CA264_05525at 1283.725 kb on + strandat 1283.780 kb on + strandat 1283.812 kb on - strandat 1283.827 kb on + strandat 1283.828 kb on - strandat 1283.828 kb on - strandat 1283.832 kb on + strandat 1283.839 kb on + strandat 1283.840 kb on - strandat 1283.866 kb on + strandat 1283.919 kb on + strandat 1283.920 kb on - strandat 1283.995 kb on - strandat 1283.997 kb on + strandat 1283.997 kb on + strandat 1284.052 kb on - strandat 1284.061 kb on + strandat 1284.062 kb on - strandat 1284.062 kb on - strandat 1284.062 kb on - strandat 1284.062 kb on - strandat 1284.096 kb on + strandat 1284.097 kb on - strandat 1284.117 kb on - strandat 1284.117 kb on - strandat 1284.117 kb on - strandat 1284.117 kb on - strandat 1284.117 kb on - strandat 1284.117 kb on - strandat 1284.267 kb on - strandat 1284.267 kb on - strandat 1284.568 kb on + strand, within CA264_05530at 1284.569 kb on - strand, within CA264_05530at 1284.686 kb on + strand, within CA264_05530

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml
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1,281,740 - +0.8
1,281,743 + +0.3
1,281,750 + +0.8
1,281,758 + +0.2
1,281,800 - +0.7
1,281,891 + -0.6
1,281,891 + -0.5
1,281,891 + -1.7
1,281,892 - +0.1
1,281,894 - +0.2
1,281,913 + CA264_05520 0.11 +0.4
1,282,271 - CA264_05520 0.50 -0.4
1,282,399 - CA264_05520 0.64 +0.9
1,282,415 + CA264_05520 0.65 +0.2
1,282,443 + CA264_05520 0.68 -0.1
1,282,443 + CA264_05520 0.68 -0.9
1,282,444 - CA264_05520 0.68 -1.9
1,282,460 + CA264_05520 0.70 -0.7
1,282,460 + CA264_05520 0.70 +0.2
1,282,548 + CA264_05520 0.80 -0.2
1,282,563 + CA264_05520 0.81 -0.8
1,282,563 + CA264_05520 0.81 -0.9
1,282,563 + CA264_05520 0.81 +0.9
1,282,638 + CA264_05520 0.89 +1.5
1,282,638 + CA264_05520 0.89 -0.8
1,282,639 - CA264_05520 0.89 -0.5
1,282,639 - CA264_05520 0.89 +0.7
1,282,639 - CA264_05520 0.89 +0.4
1,282,666 - +0.6
1,282,693 + +0.1
1,282,694 - +0.0
1,282,745 + -0.3
1,282,745 + +0.8
1,282,787 + -1.9
1,282,788 - -2.0
1,282,788 - -0.7
1,282,789 + -0.8
1,282,789 + +0.2
1,282,789 + -1.7
1,282,821 - -0.2
1,282,844 + CA264_05525 0.10 -1.3
1,282,844 + CA264_05525 0.10 -0.9
1,282,844 + CA264_05525 0.10 -1.2
1,282,854 + CA264_05525 0.11 -1.3
1,282,854 + CA264_05525 0.11 -2.2
1,282,855 - CA264_05525 0.11 -0.7
1,282,855 - CA264_05525 0.11 -1.6
1,282,878 + CA264_05525 0.14 -0.9
1,282,925 + CA264_05525 0.18 +0.7
1,283,035 - CA264_05525 0.28 -0.8
1,283,041 + CA264_05525 0.29 -0.5
1,283,099 - CA264_05525 0.34 -0.7
1,283,140 + CA264_05525 0.38 -2.0
1,283,199 - CA264_05525 0.44 -1.3
1,283,237 + CA264_05525 0.47 -1.1
1,283,262 - CA264_05525 0.50 -0.8
1,283,262 - CA264_05525 0.50 -1.8
1,283,309 + CA264_05525 0.54 +1.4
1,283,310 - CA264_05525 0.54 -0.4
1,283,349 - CA264_05525 0.58 -1.1
1,283,384 - CA264_05525 0.61 -0.7
1,283,396 - CA264_05525 0.62 -1.0
1,283,424 + CA264_05525 0.65 -0.4
1,283,426 + CA264_05525 0.65 -0.8
1,283,495 - CA264_05525 0.72 -1.2
1,283,507 + CA264_05525 0.73 -0.0
1,283,508 - CA264_05525 0.73 -0.2
1,283,576 + CA264_05525 0.79 -0.1
1,283,577 - CA264_05525 0.79 -2.6
1,283,725 + -1.2
1,283,780 + -0.2
1,283,812 - -0.2
1,283,827 + +0.1
1,283,828 - -0.7
1,283,828 - -1.1
1,283,832 + -0.3
1,283,839 + -0.4
1,283,840 - -0.9
1,283,866 + -1.1
1,283,919 + -0.6
1,283,920 - +0.2
1,283,995 - -0.3
1,283,997 + -0.2
1,283,997 + -1.4
1,284,052 - +0.6
1,284,061 + -0.7
1,284,062 - -0.0
1,284,062 - +0.4
1,284,062 - +0.2
1,284,062 - -1.5
1,284,096 + -1.9
1,284,097 - -0.3
1,284,117 - -0.1
1,284,117 - +1.0
1,284,117 - -0.3
1,284,117 - -0.0
1,284,117 - +0.0
1,284,117 - +0.2
1,284,267 - -0.3
1,284,267 - -0.6
1,284,568 + CA264_05530 0.20 -0.9
1,284,569 - CA264_05530 0.20 -0.0
1,284,686 + CA264_05530 0.25 -0.0

Or see this region's nucleotide sequence