Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05520 and CA264_05525 overlap by 4 nucleotides CA264_05525 and CA264_05530 are separated by 246 nucleotides
CA264_05520: CA264_05520 - AraC family transcriptional regulator, at 1,281,810 to 1,282,736
_05520
CA264_05525: CA264_05525 - oxidoreductase, at 1,282,733 to 1,283,794
_05525
CA264_05530: CA264_05530 - phosphoenolpyruvate carboxylase, at 1,284,041 to 1,286,626
_05530
Position (kb)
1282
1283
1284 Strain fitness (log2 ratio)
-2
-1
0
1 at 1281.740 kb on - strand at 1281.743 kb on + strand at 1281.750 kb on + strand at 1281.758 kb on + strand at 1281.800 kb on - strand at 1281.891 kb on + strand at 1281.891 kb on + strand at 1281.891 kb on + strand at 1281.892 kb on - strand at 1281.894 kb on - strand at 1281.913 kb on + strand, within CA264_05520 at 1282.271 kb on - strand, within CA264_05520 at 1282.399 kb on - strand, within CA264_05520 at 1282.415 kb on + strand, within CA264_05520 at 1282.443 kb on + strand, within CA264_05520 at 1282.443 kb on + strand, within CA264_05520 at 1282.444 kb on - strand, within CA264_05520 at 1282.460 kb on + strand, within CA264_05520 at 1282.460 kb on + strand, within CA264_05520 at 1282.548 kb on + strand, within CA264_05520 at 1282.563 kb on + strand, within CA264_05520 at 1282.563 kb on + strand, within CA264_05520 at 1282.563 kb on + strand, within CA264_05520 at 1282.638 kb on + strand, within CA264_05520 at 1282.638 kb on + strand, within CA264_05520 at 1282.639 kb on - strand, within CA264_05520 at 1282.639 kb on - strand, within CA264_05520 at 1282.639 kb on - strand, within CA264_05520 at 1282.666 kb on - strand at 1282.693 kb on + strand at 1282.694 kb on - strand at 1282.745 kb on + strand at 1282.745 kb on + strand at 1282.787 kb on + strand at 1282.788 kb on - strand at 1282.788 kb on - strand at 1282.789 kb on + strand at 1282.789 kb on + strand at 1282.789 kb on + strand at 1282.821 kb on - strand at 1282.844 kb on + strand, within CA264_05525 at 1282.844 kb on + strand, within CA264_05525 at 1282.844 kb on + strand, within CA264_05525 at 1282.854 kb on + strand, within CA264_05525 at 1282.854 kb on + strand, within CA264_05525 at 1282.855 kb on - strand, within CA264_05525 at 1282.855 kb on - strand, within CA264_05525 at 1282.878 kb on + strand, within CA264_05525 at 1282.925 kb on + strand, within CA264_05525 at 1283.035 kb on - strand, within CA264_05525 at 1283.041 kb on + strand, within CA264_05525 at 1283.099 kb on - strand, within CA264_05525 at 1283.140 kb on + strand, within CA264_05525 at 1283.199 kb on - strand, within CA264_05525 at 1283.237 kb on + strand, within CA264_05525 at 1283.262 kb on - strand, within CA264_05525 at 1283.262 kb on - strand, within CA264_05525 at 1283.309 kb on + strand, within CA264_05525 at 1283.310 kb on - strand, within CA264_05525 at 1283.349 kb on - strand, within CA264_05525 at 1283.384 kb on - strand, within CA264_05525 at 1283.396 kb on - strand, within CA264_05525 at 1283.424 kb on + strand, within CA264_05525 at 1283.426 kb on + strand, within CA264_05525 at 1283.495 kb on - strand, within CA264_05525 at 1283.507 kb on + strand, within CA264_05525 at 1283.508 kb on - strand, within CA264_05525 at 1283.576 kb on + strand, within CA264_05525 at 1283.577 kb on - strand, within CA264_05525 at 1283.725 kb on + strand at 1283.780 kb on + strand at 1283.812 kb on - strand at 1283.827 kb on + strand at 1283.828 kb on - strand at 1283.828 kb on - strand at 1283.832 kb on + strand at 1283.839 kb on + strand at 1283.840 kb on - strand at 1283.866 kb on + strand at 1283.919 kb on + strand at 1283.920 kb on - strand at 1283.995 kb on - strand at 1283.997 kb on + strand at 1283.997 kb on + strand at 1284.052 kb on - strand at 1284.061 kb on + strand at 1284.062 kb on - strand at 1284.062 kb on - strand at 1284.062 kb on - strand at 1284.062 kb on - strand at 1284.096 kb on + strand at 1284.097 kb on - strand at 1284.117 kb on - strand at 1284.117 kb on - strand at 1284.117 kb on - strand at 1284.117 kb on - strand at 1284.117 kb on - strand at 1284.117 kb on - strand at 1284.267 kb on - strand at 1284.267 kb on - strand at 1284.568 kb on + strand, within CA264_05530 at 1284.569 kb on - strand, within CA264_05530 at 1284.686 kb on + strand, within CA264_05530
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 1,281,740 - +0.8 1,281,743 + +0.3 1,281,750 + +0.8 1,281,758 + +0.2 1,281,800 - +0.7 1,281,891 + -0.6 1,281,891 + -0.5 1,281,891 + -1.7 1,281,892 - +0.1 1,281,894 - +0.2 1,281,913 + CA264_05520 0.11 +0.4 1,282,271 - CA264_05520 0.50 -0.4 1,282,399 - CA264_05520 0.64 +0.9 1,282,415 + CA264_05520 0.65 +0.2 1,282,443 + CA264_05520 0.68 -0.1 1,282,443 + CA264_05520 0.68 -0.9 1,282,444 - CA264_05520 0.68 -1.9 1,282,460 + CA264_05520 0.70 -0.7 1,282,460 + CA264_05520 0.70 +0.2 1,282,548 + CA264_05520 0.80 -0.2 1,282,563 + CA264_05520 0.81 -0.8 1,282,563 + CA264_05520 0.81 -0.9 1,282,563 + CA264_05520 0.81 +0.9 1,282,638 + CA264_05520 0.89 +1.5 1,282,638 + CA264_05520 0.89 -0.8 1,282,639 - CA264_05520 0.89 -0.5 1,282,639 - CA264_05520 0.89 +0.7 1,282,639 - CA264_05520 0.89 +0.4 1,282,666 - +0.6 1,282,693 + +0.1 1,282,694 - +0.0 1,282,745 + -0.3 1,282,745 + +0.8 1,282,787 + -1.9 1,282,788 - -2.0 1,282,788 - -0.7 1,282,789 + -0.8 1,282,789 + +0.2 1,282,789 + -1.7 1,282,821 - -0.2 1,282,844 + CA264_05525 0.10 -1.3 1,282,844 + CA264_05525 0.10 -0.9 1,282,844 + CA264_05525 0.10 -1.2 1,282,854 + CA264_05525 0.11 -1.3 1,282,854 + CA264_05525 0.11 -2.2 1,282,855 - CA264_05525 0.11 -0.7 1,282,855 - CA264_05525 0.11 -1.6 1,282,878 + CA264_05525 0.14 -0.9 1,282,925 + CA264_05525 0.18 +0.7 1,283,035 - CA264_05525 0.28 -0.8 1,283,041 + CA264_05525 0.29 -0.5 1,283,099 - CA264_05525 0.34 -0.7 1,283,140 + CA264_05525 0.38 -2.0 1,283,199 - CA264_05525 0.44 -1.3 1,283,237 + CA264_05525 0.47 -1.1 1,283,262 - CA264_05525 0.50 -0.8 1,283,262 - CA264_05525 0.50 -1.8 1,283,309 + CA264_05525 0.54 +1.4 1,283,310 - CA264_05525 0.54 -0.4 1,283,349 - CA264_05525 0.58 -1.1 1,283,384 - CA264_05525 0.61 -0.7 1,283,396 - CA264_05525 0.62 -1.0 1,283,424 + CA264_05525 0.65 -0.4 1,283,426 + CA264_05525 0.65 -0.8 1,283,495 - CA264_05525 0.72 -1.2 1,283,507 + CA264_05525 0.73 -0.0 1,283,508 - CA264_05525 0.73 -0.2 1,283,576 + CA264_05525 0.79 -0.1 1,283,577 - CA264_05525 0.79 -2.6 1,283,725 + -1.2 1,283,780 + -0.2 1,283,812 - -0.2 1,283,827 + +0.1 1,283,828 - -0.7 1,283,828 - -1.1 1,283,832 + -0.3 1,283,839 + -0.4 1,283,840 - -0.9 1,283,866 + -1.1 1,283,919 + -0.6 1,283,920 - +0.2 1,283,995 - -0.3 1,283,997 + -0.2 1,283,997 + -1.4 1,284,052 - +0.6 1,284,061 + -0.7 1,284,062 - -0.0 1,284,062 - +0.4 1,284,062 - +0.2 1,284,062 - -1.5 1,284,096 + -1.9 1,284,097 - -0.3 1,284,117 - -0.1 1,284,117 - +1.0 1,284,117 - -0.3 1,284,117 - -0.0 1,284,117 - +0.0 1,284,117 - +0.2 1,284,267 - -0.3 1,284,267 - -0.6 1,284,568 + CA264_05530 0.20 -0.9 1,284,569 - CA264_05530 0.20 -0.0 1,284,686 + CA264_05530 0.25 -0.0
Or see this region's nucleotide sequence