Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04530 and CA264_04535 are separated by 87 nucleotides CA264_04535 and CA264_04540 are separated by 145 nucleotides CA264_04540 and CA264_04545 overlap by 6 nucleotides
CA264_04530: CA264_04530 - alpha-ketoacid dehydrogenase subunit beta, at 1,046,543 to 1,047,526
_04530
CA264_04535: CA264_04535 - hypothetical protein, at 1,047,614 to 1,049,398
_04535
CA264_04540: CA264_04540 - PspC family transcriptional regulator, at 1,049,544 to 1,049,762
_04540
CA264_04545: CA264_04545 - dTDP-Rha--alpha-D-GlcNAc-pyrophosphate polyprenol alpha-3-L-rhamnosyltransferase, at 1,049,757 to 1,050,764
_04545
Position (kb)
1047
1048
1049
1050 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1047.528 kb on + strand at 1047.538 kb on - strand at 1047.557 kb on - strand at 1047.562 kb on + strand at 1047.581 kb on + strand at 1047.582 kb on - strand at 1047.609 kb on + strand at 1047.610 kb on - strand at 1047.636 kb on + strand at 1047.677 kb on + strand at 1047.678 kb on - strand at 1047.846 kb on + strand, within CA264_04535 at 1047.864 kb on + strand, within CA264_04535 at 1047.865 kb on - strand, within CA264_04535 at 1047.865 kb on - strand, within CA264_04535 at 1047.894 kb on + strand, within CA264_04535 at 1047.895 kb on - strand, within CA264_04535 at 1047.909 kb on + strand, within CA264_04535 at 1047.909 kb on + strand, within CA264_04535 at 1047.914 kb on - strand, within CA264_04535 at 1048.030 kb on - strand, within CA264_04535 at 1048.066 kb on - strand, within CA264_04535 at 1048.081 kb on + strand, within CA264_04535 at 1048.083 kb on + strand, within CA264_04535 at 1048.084 kb on - strand, within CA264_04535 at 1048.088 kb on + strand, within CA264_04535 at 1048.088 kb on + strand, within CA264_04535 at 1048.088 kb on + strand, within CA264_04535 at 1048.088 kb on + strand, within CA264_04535 at 1048.089 kb on - strand, within CA264_04535 at 1048.135 kb on + strand, within CA264_04535 at 1048.213 kb on + strand, within CA264_04535 at 1048.215 kb on + strand, within CA264_04535 at 1048.371 kb on + strand, within CA264_04535 at 1048.444 kb on + strand, within CA264_04535 at 1048.444 kb on + strand, within CA264_04535 at 1048.445 kb on - strand, within CA264_04535 at 1048.446 kb on + strand, within CA264_04535 at 1048.459 kb on - strand, within CA264_04535 at 1048.523 kb on + strand, within CA264_04535 at 1048.524 kb on - strand, within CA264_04535 at 1048.625 kb on + strand, within CA264_04535 at 1048.625 kb on + strand, within CA264_04535 at 1048.656 kb on - strand, within CA264_04535 at 1048.671 kb on + strand, within CA264_04535 at 1048.780 kb on - strand, within CA264_04535 at 1048.898 kb on - strand, within CA264_04535 at 1048.974 kb on + strand, within CA264_04535 at 1048.975 kb on - strand, within CA264_04535 at 1049.050 kb on - strand, within CA264_04535 at 1049.121 kb on + strand, within CA264_04535 at 1049.122 kb on - strand, within CA264_04535 at 1049.157 kb on + strand, within CA264_04535 at 1049.163 kb on + strand, within CA264_04535 at 1049.164 kb on - strand, within CA264_04535 at 1049.182 kb on - strand, within CA264_04535 at 1049.182 kb on - strand, within CA264_04535 at 1049.389 kb on - strand at 1049.398 kb on + strand at 1049.429 kb on + strand at 1049.430 kb on - strand at 1049.465 kb on + strand at 1049.469 kb on - strand at 1049.469 kb on - strand at 1049.469 kb on - strand at 1049.469 kb on - strand at 1049.469 kb on - strand at 1049.492 kb on + strand at 1049.519 kb on - strand at 1049.524 kb on - strand at 1049.540 kb on + strand at 1049.559 kb on + strand at 1049.560 kb on - strand at 1049.562 kb on + strand at 1049.562 kb on + strand at 1049.562 kb on + strand at 1049.562 kb on + strand at 1049.563 kb on - strand at 1049.627 kb on + strand, within CA264_04540 at 1049.628 kb on - strand, within CA264_04540 at 1049.650 kb on - strand, within CA264_04540 at 1049.758 kb on + strand at 1049.758 kb on + strand at 1049.758 kb on + strand at 1049.761 kb on - strand at 1049.761 kb on - strand at 1049.761 kb on - strand at 1049.761 kb on - strand at 1049.761 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 1,047,528 + +2.0 1,047,538 - +0.1 1,047,557 - -1.0 1,047,562 + +2.4 1,047,581 + -0.8 1,047,582 - -0.4 1,047,609 + -0.9 1,047,610 - +0.3 1,047,636 + +0.4 1,047,677 + +1.9 1,047,678 - -1.2 1,047,846 + CA264_04535 0.13 +1.0 1,047,864 + CA264_04535 0.14 -0.1 1,047,865 - CA264_04535 0.14 -0.1 1,047,865 - CA264_04535 0.14 +0.5 1,047,894 + CA264_04535 0.16 +1.8 1,047,895 - CA264_04535 0.16 -0.4 1,047,909 + CA264_04535 0.17 +0.5 1,047,909 + CA264_04535 0.17 +1.2 1,047,914 - CA264_04535 0.17 +0.1 1,048,030 - CA264_04535 0.23 +0.1 1,048,066 - CA264_04535 0.25 -0.6 1,048,081 + CA264_04535 0.26 +1.6 1,048,083 + CA264_04535 0.26 +1.2 1,048,084 - CA264_04535 0.26 +0.1 1,048,088 + CA264_04535 0.27 +1.5 1,048,088 + CA264_04535 0.27 +1.5 1,048,088 + CA264_04535 0.27 +0.5 1,048,088 + CA264_04535 0.27 +0.7 1,048,089 - CA264_04535 0.27 -0.1 1,048,135 + CA264_04535 0.29 +0.8 1,048,213 + CA264_04535 0.34 +1.0 1,048,215 + CA264_04535 0.34 +0.9 1,048,371 + CA264_04535 0.42 +1.1 1,048,444 + CA264_04535 0.46 +1.8 1,048,444 + CA264_04535 0.46 +0.8 1,048,445 - CA264_04535 0.47 -0.7 1,048,446 + CA264_04535 0.47 +1.0 1,048,459 - CA264_04535 0.47 -0.2 1,048,523 + CA264_04535 0.51 +1.7 1,048,524 - CA264_04535 0.51 +0.8 1,048,625 + CA264_04535 0.57 +1.2 1,048,625 + CA264_04535 0.57 +1.8 1,048,656 - CA264_04535 0.58 +0.5 1,048,671 + CA264_04535 0.59 +1.7 1,048,780 - CA264_04535 0.65 +0.9 1,048,898 - CA264_04535 0.72 +1.0 1,048,974 + CA264_04535 0.76 +2.4 1,048,975 - CA264_04535 0.76 +1.6 1,049,050 - CA264_04535 0.80 +1.3 1,049,121 + CA264_04535 0.84 +2.4 1,049,122 - CA264_04535 0.84 -0.4 1,049,157 + CA264_04535 0.86 +2.3 1,049,163 + CA264_04535 0.87 +2.0 1,049,164 - CA264_04535 0.87 -0.5 1,049,182 - CA264_04535 0.88 +1.7 1,049,182 - CA264_04535 0.88 +1.7 1,049,389 - +1.2 1,049,398 + +2.8 1,049,429 + +3.0 1,049,430 - +0.9 1,049,465 + +2.8 1,049,469 - +0.7 1,049,469 - +0.1 1,049,469 - +1.9 1,049,469 - +1.5 1,049,469 - +1.4 1,049,492 + +2.7 1,049,519 - +1.1 1,049,524 - +1.3 1,049,540 + +1.2 1,049,559 + +1.3 1,049,560 - -1.8 1,049,562 + +0.6 1,049,562 + +1.5 1,049,562 + +0.5 1,049,562 + -0.0 1,049,563 - -0.5 1,049,627 + CA264_04540 0.38 +0.9 1,049,628 - CA264_04540 0.38 -0.8 1,049,650 - CA264_04540 0.48 +0.3 1,049,758 + +2.1 1,049,758 + +1.5 1,049,758 + +2.2 1,049,761 - +1.6 1,049,761 - +1.0 1,049,761 - -1.4 1,049,761 - -0.2 1,049,761 - -0.1
Or see this region's nucleotide sequence