Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_04420

Experiment: m.b. Thallium(I) acetate 0.001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_04410 and CA264_04415 are separated by 258 nucleotidesCA264_04415 and CA264_04420 are separated by 109 nucleotidesCA264_04420 and CA264_04425 are separated by 70 nucleotides CA264_04410: CA264_04410 - hypothetical protein, at 1,019,744 to 1,020,802 _04410 CA264_04415: CA264_04415 - hypothetical protein, at 1,021,061 to 1,021,351 _04415 CA264_04420: CA264_04420 - Xaa-Pro aminopeptidase, at 1,021,461 to 1,022,819 _04420 CA264_04425: CA264_04425 - endonuclease, at 1,022,890 to 1,023,897 _04425 Position (kb) 1021 1022 1023Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 1020.560 kb on + strand, within CA264_04410at 1020.576 kb on + strand, within CA264_04410at 1020.576 kb on + strand, within CA264_04410at 1020.577 kb on - strand, within CA264_04410at 1020.767 kb on - strandat 1020.830 kb on + strandat 1020.832 kb on + strandat 1020.833 kb on - strandat 1020.837 kb on - strandat 1020.837 kb on - strandat 1020.855 kb on - strandat 1020.890 kb on - strandat 1020.890 kb on - strandat 1020.961 kb on + strandat 1021.011 kb on + strandat 1021.011 kb on + strandat 1021.012 kb on - strandat 1021.029 kb on - strandat 1021.034 kb on + strandat 1021.035 kb on - strandat 1021.041 kb on - strandat 1021.065 kb on + strandat 1021.072 kb on + strandat 1021.073 kb on - strandat 1021.076 kb on + strandat 1021.076 kb on + strandat 1021.076 kb on + strandat 1021.077 kb on - strandat 1021.077 kb on - strandat 1021.078 kb on + strandat 1021.078 kb on + strandat 1021.078 kb on + strandat 1021.078 kb on + strandat 1021.079 kb on - strandat 1021.079 kb on - strandat 1021.079 kb on - strandat 1021.079 kb on - strandat 1021.079 kb on - strandat 1021.207 kb on + strand, within CA264_04415at 1021.218 kb on + strand, within CA264_04415at 1021.337 kb on - strandat 1021.363 kb on + strandat 1021.462 kb on + strandat 1021.463 kb on - strandat 1021.492 kb on - strandat 1021.606 kb on - strand, within CA264_04420at 1021.630 kb on + strand, within CA264_04420at 1021.654 kb on + strand, within CA264_04420at 1021.698 kb on + strand, within CA264_04420at 1021.733 kb on + strand, within CA264_04420at 1021.744 kb on + strand, within CA264_04420at 1021.882 kb on + strand, within CA264_04420at 1021.882 kb on + strand, within CA264_04420at 1021.883 kb on - strand, within CA264_04420at 1021.885 kb on - strand, within CA264_04420at 1021.918 kb on + strand, within CA264_04420at 1021.918 kb on + strand, within CA264_04420at 1021.918 kb on + strand, within CA264_04420at 1021.918 kb on + strand, within CA264_04420at 1021.940 kb on + strand, within CA264_04420at 1021.940 kb on + strand, within CA264_04420at 1021.940 kb on + strand, within CA264_04420at 1021.941 kb on - strand, within CA264_04420at 1021.941 kb on - strand, within CA264_04420at 1021.955 kb on - strand, within CA264_04420at 1022.163 kb on + strand, within CA264_04420at 1022.224 kb on + strand, within CA264_04420at 1022.224 kb on + strand, within CA264_04420at 1022.225 kb on - strand, within CA264_04420at 1022.317 kb on + strand, within CA264_04420at 1022.318 kb on - strand, within CA264_04420at 1022.380 kb on + strand, within CA264_04420at 1022.478 kb on + strand, within CA264_04420at 1022.479 kb on - strand, within CA264_04420at 1022.494 kb on + strand, within CA264_04420at 1022.495 kb on - strand, within CA264_04420at 1022.645 kb on + strand, within CA264_04420at 1022.645 kb on + strand, within CA264_04420at 1022.646 kb on - strand, within CA264_04420at 1022.846 kb on - strandat 1022.869 kb on - strandat 1022.879 kb on - strandat 1022.892 kb on - strandat 1022.916 kb on - strandat 1023.013 kb on + strand, within CA264_04425at 1023.041 kb on + strand, within CA264_04425at 1023.042 kb on - strand, within CA264_04425at 1023.042 kb on - strand, within CA264_04425at 1023.145 kb on - strand, within CA264_04425at 1023.191 kb on - strand, within CA264_04425at 1023.290 kb on - strand, within CA264_04425at 1023.290 kb on - strand, within CA264_04425at 1023.369 kb on - strand, within CA264_04425at 1023.383 kb on + strand, within CA264_04425at 1023.384 kb on - strand, within CA264_04425at 1023.384 kb on - strand, within CA264_04425at 1023.402 kb on - strand, within CA264_04425at 1023.420 kb on - strand, within CA264_04425at 1023.420 kb on - strand, within CA264_04425at 1023.647 kb on + strand, within CA264_04425at 1023.663 kb on + strand, within CA264_04425at 1023.663 kb on + strand, within CA264_04425at 1023.664 kb on - strand, within CA264_04425at 1023.664 kb on - strand, within CA264_04425at 1023.664 kb on - strand, within CA264_04425at 1023.664 kb on - strand, within CA264_04425at 1023.664 kb on - strand, within CA264_04425at 1023.785 kb on - strand, within CA264_04425at 1023.813 kb on - strandat 1023.813 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml
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1,020,560 + CA264_04410 0.77 -0.7
1,020,576 + CA264_04410 0.79 -0.5
1,020,576 + CA264_04410 0.79 +0.0
1,020,577 - CA264_04410 0.79 +0.7
1,020,767 - +0.7
1,020,830 + -0.5
1,020,832 + -1.0
1,020,833 - -1.2
1,020,837 - -0.4
1,020,837 - -2.2
1,020,855 - -2.4
1,020,890 - -0.3
1,020,890 - -2.9
1,020,961 + -0.6
1,021,011 + -3.2
1,021,011 + -2.3
1,021,012 - -2.9
1,021,029 - -3.4
1,021,034 + -0.5
1,021,035 - -0.9
1,021,041 - -2.0
1,021,065 + -2.9
1,021,072 + -0.8
1,021,073 - -1.7
1,021,076 + +0.4
1,021,076 + -0.1
1,021,076 + -2.9
1,021,077 - -2.8
1,021,077 - +0.3
1,021,078 + -0.9
1,021,078 + -1.2
1,021,078 + -2.4
1,021,078 + -0.5
1,021,079 - -2.4
1,021,079 - -2.7
1,021,079 - -4.9
1,021,079 - +0.2
1,021,079 - -3.3
1,021,207 + CA264_04415 0.50 -2.1
1,021,218 + CA264_04415 0.54 -2.1
1,021,337 - -1.4
1,021,363 + -3.9
1,021,462 + -1.3
1,021,463 - -2.2
1,021,492 - -2.1
1,021,606 - CA264_04420 0.11 -0.4
1,021,630 + CA264_04420 0.12 -1.5
1,021,654 + CA264_04420 0.14 -0.0
1,021,698 + CA264_04420 0.17 -0.7
1,021,733 + CA264_04420 0.20 -0.4
1,021,744 + CA264_04420 0.21 -0.8
1,021,882 + CA264_04420 0.31 -0.7
1,021,882 + CA264_04420 0.31 -0.6
1,021,883 - CA264_04420 0.31 -4.4
1,021,885 - CA264_04420 0.31 -1.9
1,021,918 + CA264_04420 0.34 +0.3
1,021,918 + CA264_04420 0.34 -0.1
1,021,918 + CA264_04420 0.34 -1.2
1,021,918 + CA264_04420 0.34 -0.6
1,021,940 + CA264_04420 0.35 -2.5
1,021,940 + CA264_04420 0.35 +0.2
1,021,940 + CA264_04420 0.35 -0.9
1,021,941 - CA264_04420 0.35 -2.8
1,021,941 - CA264_04420 0.35 -2.2
1,021,955 - CA264_04420 0.36 -4.4
1,022,163 + CA264_04420 0.52 -0.1
1,022,224 + CA264_04420 0.56 -1.0
1,022,224 + CA264_04420 0.56 -1.1
1,022,225 - CA264_04420 0.56 -0.9
1,022,317 + CA264_04420 0.63 -1.1
1,022,318 - CA264_04420 0.63 -0.1
1,022,380 + CA264_04420 0.68 -0.7
1,022,478 + CA264_04420 0.75 +0.6
1,022,479 - CA264_04420 0.75 -2.0
1,022,494 + CA264_04420 0.76 +1.1
1,022,495 - CA264_04420 0.76 -2.5
1,022,645 + CA264_04420 0.87 -0.6
1,022,645 + CA264_04420 0.87 -0.5
1,022,646 - CA264_04420 0.87 -2.1
1,022,846 - -1.5
1,022,869 - -2.0
1,022,879 - -1.3
1,022,892 - -0.7
1,022,916 - -1.2
1,023,013 + CA264_04425 0.12 +0.6
1,023,041 + CA264_04425 0.15 +0.9
1,023,042 - CA264_04425 0.15 -1.9
1,023,042 - CA264_04425 0.15 -1.5
1,023,145 - CA264_04425 0.25 -1.3
1,023,191 - CA264_04425 0.30 -0.7
1,023,290 - CA264_04425 0.40 -0.1
1,023,290 - CA264_04425 0.40 -0.9
1,023,369 - CA264_04425 0.48 -0.1
1,023,383 + CA264_04425 0.49 -1.5
1,023,384 - CA264_04425 0.49 -1.4
1,023,384 - CA264_04425 0.49 -0.5
1,023,402 - CA264_04425 0.51 -0.5
1,023,420 - CA264_04425 0.53 -0.1
1,023,420 - CA264_04425 0.53 -2.9
1,023,647 + CA264_04425 0.75 -1.4
1,023,663 + CA264_04425 0.77 +0.4
1,023,663 + CA264_04425 0.77 +0.1
1,023,664 - CA264_04425 0.77 -0.9
1,023,664 - CA264_04425 0.77 -1.5
1,023,664 - CA264_04425 0.77 -0.7
1,023,664 - CA264_04425 0.77 -1.5
1,023,664 - CA264_04425 0.77 -1.0
1,023,785 - CA264_04425 0.89 -0.1
1,023,813 - -0.8
1,023,813 - -0.2

Or see this region's nucleotide sequence