Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_03920

Experiment: m.b. Thallium(I) acetate 0.001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_03910 and CA264_03915 are separated by 178 nucleotidesCA264_03915 and CA264_03920 are separated by 3 nucleotidesCA264_03920 and CA264_03925 are separated by 69 nucleotidesCA264_03925 and CA264_03930 are separated by 135 nucleotides CA264_03910: CA264_03910 - family 2 glycosyl transferase, at 909,820 to 910,911 _03910 CA264_03915: CA264_03915 - hydrolase TatD, at 911,090 to 911,857 _03915 CA264_03920: CA264_03920 - L-asparaginase 1, at 911,861 to 912,928 _03920 CA264_03925: CA264_03925 - tRNA-Ser, at 912,998 to 913,088 _03925 CA264_03930: CA264_03930 - hypothetical protein, at 913,224 to 913,574 _03930 Position (kb) 911 912 913Strain fitness (log2 ratio) -2 -1 0 1 2 3at 910.864 kb on + strandat 910.881 kb on + strandat 910.882 kb on - strandat 910.910 kb on - strandat 910.924 kb on + strandat 911.033 kb on - strandat 911.042 kb on + strandat 911.042 kb on + strandat 911.074 kb on - strandat 911.087 kb on + strandat 911.087 kb on + strandat 911.087 kb on + strandat 911.088 kb on - strandat 911.088 kb on - strandat 911.088 kb on - strandat 911.116 kb on + strandat 911.117 kb on - strandat 911.120 kb on + strandat 911.181 kb on + strand, within CA264_03915at 911.218 kb on + strand, within CA264_03915at 911.219 kb on - strand, within CA264_03915at 911.250 kb on - strand, within CA264_03915at 911.387 kb on + strand, within CA264_03915at 911.666 kb on + strand, within CA264_03915at 911.667 kb on - strand, within CA264_03915at 911.708 kb on + strand, within CA264_03915at 911.709 kb on - strand, within CA264_03915at 911.753 kb on + strand, within CA264_03915at 911.753 kb on + strand, within CA264_03915at 911.855 kb on + strandat 911.861 kb on - strandat 911.877 kb on + strandat 911.884 kb on - strandat 911.884 kb on - strandat 911.919 kb on + strandat 911.923 kb on + strandat 911.923 kb on + strandat 911.931 kb on - strandat 911.931 kb on - strandat 912.003 kb on + strand, within CA264_03920at 912.038 kb on + strand, within CA264_03920at 912.082 kb on + strand, within CA264_03920at 912.124 kb on - strand, within CA264_03920at 912.134 kb on + strand, within CA264_03920at 912.143 kb on + strand, within CA264_03920at 912.144 kb on - strand, within CA264_03920at 912.144 kb on - strand, within CA264_03920at 912.185 kb on + strand, within CA264_03920at 912.206 kb on + strand, within CA264_03920at 912.358 kb on + strand, within CA264_03920at 912.358 kb on + strand, within CA264_03920at 912.359 kb on - strand, within CA264_03920at 912.363 kb on - strand, within CA264_03920at 912.474 kb on + strand, within CA264_03920at 912.479 kb on + strand, within CA264_03920at 912.519 kb on + strand, within CA264_03920at 912.520 kb on - strand, within CA264_03920at 912.520 kb on - strand, within CA264_03920at 912.523 kb on - strand, within CA264_03920at 912.576 kb on + strand, within CA264_03920at 912.775 kb on + strand, within CA264_03920at 912.775 kb on + strand, within CA264_03920at 912.776 kb on - strand, within CA264_03920at 912.776 kb on - strand, within CA264_03920at 912.776 kb on - strand, within CA264_03920at 912.776 kb on - strand, within CA264_03920at 912.786 kb on + strand, within CA264_03920at 912.817 kb on + strand, within CA264_03920at 912.818 kb on - strand, within CA264_03920at 912.920 kb on - strandat 912.943 kb on + strandat 912.981 kb on + strandat 912.983 kb on + strandat 913.166 kb on + strandat 913.167 kb on - strandat 913.265 kb on - strand, within CA264_03930at 913.351 kb on - strand, within CA264_03930at 913.368 kb on - strand, within CA264_03930at 913.428 kb on + strand, within CA264_03930at 913.429 kb on - strand, within CA264_03930at 913.440 kb on + strand, within CA264_03930at 913.440 kb on + strand, within CA264_03930at 913.440 kb on + strand, within CA264_03930at 913.441 kb on - strand, within CA264_03930at 913.582 kb on + strandat 913.587 kb on + strandat 913.600 kb on - strandat 913.608 kb on - strandat 913.608 kb on - strandat 913.608 kb on - strandat 913.619 kb on + strandat 913.619 kb on + strandat 913.619 kb on + strandat 913.620 kb on - strandat 913.629 kb on + strandat 913.666 kb on + strandat 913.667 kb on - strandat 913.670 kb on - strandat 913.696 kb on - strandat 913.699 kb on + strandat 913.700 kb on - strandat 913.722 kb on + strandat 913.731 kb on - strandat 913.731 kb on - strandat 913.783 kb on + strandat 913.814 kb on - strandat 913.903 kb on - strandat 913.903 kb on - strandat 913.912 kb on + strandat 913.912 kb on + strandat 913.912 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml
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910,864 + +2.0
910,881 + +2.1
910,882 - +2.6
910,910 - +1.2
910,924 + -0.5
911,033 - +2.9
911,042 + +0.0
911,042 + +0.0
911,074 - +1.0
911,087 + -0.1
911,087 + -0.1
911,087 + +0.7
911,088 - +1.6
911,088 - +1.4
911,088 - +1.0
911,116 + -0.7
911,117 - +0.7
911,120 + -0.7
911,181 + CA264_03915 0.12 -0.2
911,218 + CA264_03915 0.17 -0.7
911,219 - CA264_03915 0.17 +0.5
911,250 - CA264_03915 0.21 +0.3
911,387 + CA264_03915 0.39 -0.3
911,666 + CA264_03915 0.75 -0.3
911,667 - CA264_03915 0.75 +0.4
911,708 + CA264_03915 0.80 +0.3
911,709 - CA264_03915 0.81 -0.2
911,753 + CA264_03915 0.86 -1.5
911,753 + CA264_03915 0.86 +0.5
911,855 + -0.1
911,861 - -0.6
911,877 + -0.4
911,884 - +0.4
911,884 - +0.4
911,919 + +0.7
911,923 + +1.1
911,923 + -1.2
911,931 - -0.0
911,931 - -0.7
912,003 + CA264_03920 0.13 -0.6
912,038 + CA264_03920 0.17 -0.9
912,082 + CA264_03920 0.21 +2.0
912,124 - CA264_03920 0.25 +0.1
912,134 + CA264_03920 0.26 -1.9
912,143 + CA264_03920 0.26 -0.5
912,144 - CA264_03920 0.26 +0.6
912,144 - CA264_03920 0.26 +0.9
912,185 + CA264_03920 0.30 +0.4
912,206 + CA264_03920 0.32 -0.3
912,358 + CA264_03920 0.47 -1.5
912,358 + CA264_03920 0.47 -0.6
912,359 - CA264_03920 0.47 +0.2
912,363 - CA264_03920 0.47 +1.1
912,474 + CA264_03920 0.57 -0.3
912,479 + CA264_03920 0.58 -0.0
912,519 + CA264_03920 0.62 -0.5
912,520 - CA264_03920 0.62 -1.0
912,520 - CA264_03920 0.62 +0.2
912,523 - CA264_03920 0.62 -0.5
912,576 + CA264_03920 0.67 +0.0
912,775 + CA264_03920 0.86 +0.7
912,775 + CA264_03920 0.86 +1.1
912,776 - CA264_03920 0.86 +0.1
912,776 - CA264_03920 0.86 -0.2
912,776 - CA264_03920 0.86 +0.6
912,776 - CA264_03920 0.86 +0.8
912,786 + CA264_03920 0.87 -0.0
912,817 + CA264_03920 0.90 +0.3
912,818 - CA264_03920 0.90 -1.0
912,920 - -0.2
912,943 + -1.0
912,981 + +0.1
912,983 + -0.6
913,166 + +1.0
913,167 - -0.5
913,265 - CA264_03930 0.12 -0.2
913,351 - CA264_03930 0.36 -1.2
913,368 - CA264_03930 0.41 -0.2
913,428 + CA264_03930 0.58 -0.2
913,429 - CA264_03930 0.58 +0.2
913,440 + CA264_03930 0.62 -0.3
913,440 + CA264_03930 0.62 -1.2
913,440 + CA264_03930 0.62 +0.8
913,441 - CA264_03930 0.62 -0.3
913,582 + -0.8
913,587 + +0.3
913,600 - -0.6
913,608 - +1.2
913,608 - +0.1
913,608 - -0.1
913,619 + -0.1
913,619 + -0.9
913,619 + -0.5
913,620 - +0.5
913,629 + -0.8
913,666 + -0.1
913,667 - -0.5
913,670 - +2.2
913,696 - +0.5
913,699 + +0.7
913,700 - -0.9
913,722 + -0.0
913,731 - -0.3
913,731 - -0.3
913,783 + -0.4
913,814 - -0.9
913,903 - +0.5
913,903 - -0.4
913,912 + +0.4
913,912 + +0.9
913,912 + -0.8

Or see this region's nucleotide sequence