Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_03700

Experiment: m.b. Thallium(I) acetate 0.001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_03695 and CA264_03700 are separated by 139 nucleotidesCA264_03700 and CA264_03705 are separated by 38 nucleotides CA264_03695: CA264_03695 - heavy metal translocating P-type ATPase, at 865,673 to 867,700 _03695 CA264_03700: CA264_03700 - hypothetical protein, at 867,840 to 868,796 _03700 CA264_03705: CA264_03705 - AraC family transcriptional regulator, at 868,835 to 869,722 _03705 Position (kb) 867 868 869Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 867.062 kb on + strand, within CA264_03695at 867.062 kb on + strand, within CA264_03695at 867.062 kb on + strand, within CA264_03695at 867.063 kb on - strand, within CA264_03695at 867.065 kb on - strand, within CA264_03695at 867.134 kb on + strand, within CA264_03695at 867.135 kb on - strand, within CA264_03695at 867.135 kb on - strand, within CA264_03695at 867.143 kb on + strand, within CA264_03695at 867.144 kb on - strand, within CA264_03695at 867.144 kb on - strand, within CA264_03695at 867.247 kb on + strand, within CA264_03695at 867.247 kb on + strand, within CA264_03695at 867.247 kb on + strand, within CA264_03695at 867.248 kb on - strand, within CA264_03695at 867.248 kb on - strand, within CA264_03695at 867.264 kb on + strand, within CA264_03695at 867.265 kb on + strand, within CA264_03695at 867.326 kb on - strand, within CA264_03695at 867.516 kb on + strandat 867.516 kb on + strandat 867.582 kb on + strandat 867.582 kb on + strandat 867.587 kb on - strandat 867.639 kb on + strandat 867.639 kb on + strandat 867.748 kb on + strandat 867.806 kb on + strandat 867.806 kb on + strandat 867.834 kb on + strandat 867.835 kb on - strandat 867.837 kb on - strandat 867.842 kb on - strandat 867.842 kb on - strandat 867.886 kb on - strandat 867.888 kb on - strandat 867.975 kb on + strand, within CA264_03700at 867.975 kb on + strand, within CA264_03700at 867.976 kb on - strand, within CA264_03700at 867.982 kb on - strand, within CA264_03700at 868.005 kb on + strand, within CA264_03700at 868.053 kb on - strand, within CA264_03700at 868.053 kb on - strand, within CA264_03700at 868.064 kb on + strand, within CA264_03700at 868.064 kb on + strand, within CA264_03700at 868.065 kb on - strand, within CA264_03700at 868.071 kb on + strand, within CA264_03700at 868.086 kb on + strand, within CA264_03700at 868.086 kb on + strand, within CA264_03700at 868.087 kb on - strand, within CA264_03700at 868.150 kb on + strand, within CA264_03700at 868.161 kb on + strand, within CA264_03700at 868.181 kb on + strand, within CA264_03700at 868.182 kb on - strand, within CA264_03700at 868.331 kb on - strand, within CA264_03700at 868.432 kb on + strand, within CA264_03700at 868.433 kb on - strand, within CA264_03700at 868.452 kb on + strand, within CA264_03700at 868.470 kb on - strand, within CA264_03700at 868.532 kb on - strand, within CA264_03700at 868.579 kb on - strand, within CA264_03700at 868.731 kb on - strandat 868.731 kb on - strandat 868.731 kb on - strandat 868.731 kb on - strandat 868.752 kb on + strandat 868.765 kb on - strandat 868.803 kb on + strandat 868.819 kb on + strandat 868.819 kb on + strandat 868.867 kb on + strandat 868.890 kb on - strandat 868.890 kb on - strandat 868.938 kb on + strand, within CA264_03705at 868.979 kb on - strand, within CA264_03705at 869.220 kb on - strand, within CA264_03705at 869.256 kb on + strand, within CA264_03705at 869.257 kb on - strand, within CA264_03705at 869.262 kb on + strand, within CA264_03705at 869.263 kb on - strand, within CA264_03705at 869.314 kb on + strand, within CA264_03705at 869.315 kb on - strand, within CA264_03705at 869.345 kb on + strand, within CA264_03705at 869.345 kb on + strand, within CA264_03705at 869.346 kb on - strand, within CA264_03705at 869.346 kb on - strand, within CA264_03705at 869.346 kb on - strand, within CA264_03705at 869.368 kb on - strand, within CA264_03705at 869.379 kb on + strand, within CA264_03705at 869.552 kb on + strand, within CA264_03705at 869.553 kb on - strand, within CA264_03705at 869.553 kb on - strand, within CA264_03705at 869.586 kb on + strand, within CA264_03705at 869.587 kb on - strand, within CA264_03705at 869.587 kb on - strand, within CA264_03705at 869.640 kb on + strandat 869.681 kb on + strandat 869.681 kb on + strandat 869.784 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml
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867,062 + CA264_03695 0.68 +2.2
867,062 + CA264_03695 0.68 -0.9
867,062 + CA264_03695 0.68 -0.7
867,063 - CA264_03695 0.69 +0.6
867,065 - CA264_03695 0.69 -0.0
867,134 + CA264_03695 0.72 +0.4
867,135 - CA264_03695 0.72 -0.3
867,135 - CA264_03695 0.72 -0.0
867,143 + CA264_03695 0.72 -0.8
867,144 - CA264_03695 0.73 -0.3
867,144 - CA264_03695 0.73 -0.1
867,247 + CA264_03695 0.78 +0.0
867,247 + CA264_03695 0.78 +0.4
867,247 + CA264_03695 0.78 -1.7
867,248 - CA264_03695 0.78 -0.0
867,248 - CA264_03695 0.78 +0.2
867,264 + CA264_03695 0.78 -0.2
867,265 + CA264_03695 0.79 +1.0
867,326 - CA264_03695 0.82 +0.7
867,516 + -0.1
867,516 + -0.1
867,582 + -1.0
867,582 + -2.8
867,587 - +1.3
867,639 + +0.4
867,639 + -0.3
867,748 + -1.3
867,806 + -1.9
867,806 + +0.7
867,834 + +1.0
867,835 - +0.2
867,837 - +0.9
867,842 - +0.2
867,842 - -1.0
867,886 - +0.6
867,888 - -0.4
867,975 + CA264_03700 0.14 -1.7
867,975 + CA264_03700 0.14 -0.3
867,976 - CA264_03700 0.14 -0.5
867,982 - CA264_03700 0.15 -0.7
868,005 + CA264_03700 0.17 -0.5
868,053 - CA264_03700 0.22 -1.2
868,053 - CA264_03700 0.22 -0.5
868,064 + CA264_03700 0.23 -0.3
868,064 + CA264_03700 0.23 -1.2
868,065 - CA264_03700 0.24 -0.3
868,071 + CA264_03700 0.24 -1.0
868,086 + CA264_03700 0.26 +0.1
868,086 + CA264_03700 0.26 +1.7
868,087 - CA264_03700 0.26 +0.7
868,150 + CA264_03700 0.32 -0.3
868,161 + CA264_03700 0.34 -1.5
868,181 + CA264_03700 0.36 +0.5
868,182 - CA264_03700 0.36 +0.2
868,331 - CA264_03700 0.51 -1.2
868,432 + CA264_03700 0.62 -0.0
868,433 - CA264_03700 0.62 +0.5
868,452 + CA264_03700 0.64 -1.2
868,470 - CA264_03700 0.66 +0.6
868,532 - CA264_03700 0.72 +0.7
868,579 - CA264_03700 0.77 -0.1
868,731 - -0.3
868,731 - -0.4
868,731 - -0.5
868,731 - -0.3
868,752 + -1.4
868,765 - -0.1
868,803 + +0.0
868,819 + -0.5
868,819 + +0.5
868,867 + -1.7
868,890 - -0.5
868,890 - +2.0
868,938 + CA264_03705 0.12 -1.7
868,979 - CA264_03705 0.16 -0.6
869,220 - CA264_03705 0.43 +0.0
869,256 + CA264_03705 0.47 -0.8
869,257 - CA264_03705 0.48 -0.0
869,262 + CA264_03705 0.48 -1.3
869,263 - CA264_03705 0.48 +0.3
869,314 + CA264_03705 0.54 -0.3
869,315 - CA264_03705 0.54 -0.1
869,345 + CA264_03705 0.57 +0.2
869,345 + CA264_03705 0.57 -0.3
869,346 - CA264_03705 0.58 -0.7
869,346 - CA264_03705 0.58 -2.3
869,346 - CA264_03705 0.58 -0.9
869,368 - CA264_03705 0.60 -0.1
869,379 + CA264_03705 0.61 -1.1
869,552 + CA264_03705 0.81 -0.7
869,553 - CA264_03705 0.81 -0.9
869,553 - CA264_03705 0.81 -1.5
869,586 + CA264_03705 0.85 -0.3
869,587 - CA264_03705 0.85 +0.8
869,587 - CA264_03705 0.85 -0.4
869,640 + -0.2
869,681 + -0.3
869,681 + -0.7
869,784 + -0.9

Or see this region's nucleotide sequence