Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_00755

Experiment: m.b. Thallium(I) acetate 0.001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_00745 and CA264_00750 are separated by 122 nucleotidesCA264_00750 and CA264_00755 are separated by 291 nucleotidesCA264_00755 and CA264_00760 are separated by 234 nucleotides CA264_00745: CA264_00745 - ribonuclease III, at 160,148 to 160,888 _00745 CA264_00750: CA264_00750 - hypothetical protein, at 161,011 to 161,379 _00750 CA264_00755: CA264_00755 - SAM-dependent methyltransferase, at 161,671 to 162,927 _00755 CA264_00760: CA264_00760 - NAD(+) synthase, at 163,162 to 165,048 _00760 Position (kb) 161 162 163Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 160.748 kb on - strand, within CA264_00745at 160.786 kb on - strand, within CA264_00745at 160.787 kb on + strand, within CA264_00745at 160.787 kb on + strand, within CA264_00745at 160.788 kb on - strand, within CA264_00745at 160.818 kb on + strandat 160.818 kb on + strandat 160.882 kb on + strandat 160.883 kb on - strandat 160.898 kb on + strandat 160.911 kb on - strandat 160.934 kb on - strandat 160.987 kb on + strandat 160.999 kb on + strandat 160.999 kb on + strandat 161.000 kb on - strandat 161.003 kb on + strandat 161.041 kb on + strandat 161.043 kb on + strandat 161.067 kb on - strand, within CA264_00750at 161.067 kb on - strand, within CA264_00750at 161.067 kb on - strand, within CA264_00750at 161.076 kb on - strand, within CA264_00750at 161.109 kb on - strand, within CA264_00750at 161.147 kb on + strand, within CA264_00750at 161.179 kb on + strand, within CA264_00750at 161.244 kb on + strand, within CA264_00750at 161.246 kb on + strand, within CA264_00750at 161.246 kb on + strand, within CA264_00750at 161.246 kb on + strand, within CA264_00750at 161.247 kb on - strand, within CA264_00750at 161.247 kb on - strand, within CA264_00750at 161.247 kb on - strand, within CA264_00750at 161.250 kb on + strand, within CA264_00750at 161.250 kb on + strand, within CA264_00750at 161.251 kb on - strand, within CA264_00750at 161.251 kb on - strand, within CA264_00750at 161.253 kb on - strand, within CA264_00750at 161.253 kb on - strand, within CA264_00750at 161.303 kb on + strand, within CA264_00750at 161.303 kb on + strand, within CA264_00750at 161.303 kb on + strand, within CA264_00750at 161.304 kb on - strand, within CA264_00750at 161.304 kb on - strand, within CA264_00750at 161.313 kb on - strand, within CA264_00750at 161.333 kb on - strand, within CA264_00750at 161.347 kb on - strandat 161.347 kb on - strandat 161.507 kb on + strandat 161.508 kb on - strandat 161.553 kb on + strandat 161.597 kb on + strandat 161.597 kb on + strandat 161.598 kb on - strandat 161.622 kb on - strandat 161.648 kb on - strandat 161.670 kb on + strandat 161.671 kb on - strandat 161.750 kb on + strandat 161.755 kb on + strandat 161.755 kb on + strandat 161.756 kb on - strandat 161.812 kb on - strand, within CA264_00755at 161.831 kb on + strand, within CA264_00755at 161.840 kb on - strand, within CA264_00755at 161.862 kb on + strand, within CA264_00755at 161.872 kb on + strand, within CA264_00755at 161.872 kb on + strand, within CA264_00755at 161.872 kb on + strand, within CA264_00755at 161.873 kb on - strand, within CA264_00755at 161.873 kb on - strand, within CA264_00755at 161.873 kb on - strand, within CA264_00755at 161.878 kb on + strand, within CA264_00755at 161.935 kb on - strand, within CA264_00755at 161.954 kb on - strand, within CA264_00755at 162.093 kb on + strand, within CA264_00755at 162.135 kb on - strand, within CA264_00755at 162.135 kb on - strand, within CA264_00755at 162.135 kb on - strand, within CA264_00755at 162.138 kb on + strand, within CA264_00755at 162.138 kb on + strand, within CA264_00755at 162.139 kb on - strand, within CA264_00755at 162.140 kb on + strand, within CA264_00755at 162.285 kb on - strand, within CA264_00755at 162.310 kb on + strand, within CA264_00755at 162.310 kb on + strand, within CA264_00755at 162.310 kb on + strand, within CA264_00755at 162.311 kb on - strand, within CA264_00755at 162.311 kb on - strand, within CA264_00755at 162.328 kb on + strand, within CA264_00755at 162.329 kb on - strand, within CA264_00755at 162.348 kb on + strand, within CA264_00755at 162.390 kb on - strand, within CA264_00755at 162.462 kb on - strand, within CA264_00755at 162.462 kb on - strand, within CA264_00755at 162.524 kb on - strand, within CA264_00755at 162.524 kb on - strand, within CA264_00755at 162.555 kb on + strand, within CA264_00755at 162.555 kb on + strand, within CA264_00755at 162.556 kb on - strand, within CA264_00755at 162.558 kb on + strand, within CA264_00755at 162.559 kb on - strand, within CA264_00755at 162.562 kb on + strand, within CA264_00755at 162.562 kb on + strand, within CA264_00755at 162.725 kb on - strand, within CA264_00755at 162.763 kb on - strand, within CA264_00755at 162.787 kb on + strand, within CA264_00755at 162.788 kb on - strand, within CA264_00755at 162.788 kb on - strand, within CA264_00755at 162.788 kb on - strand, within CA264_00755at 162.836 kb on + strandat 162.837 kb on - strandat 162.841 kb on + strandat 162.842 kb on - strandat 162.842 kb on - strandat 162.861 kb on + strandat 162.862 kb on - strandat 162.870 kb on - strandat 162.918 kb on + strandat 162.923 kb on + strandat 162.924 kb on - strandat 162.924 kb on - strandat 162.924 kb on - strandat 162.924 kb on - strandat 162.926 kb on - strandat 162.926 kb on - strandat 162.929 kb on - strandat 162.944 kb on + strandat 162.944 kb on + strandat 162.948 kb on + strandat 162.972 kb on - strandat 162.976 kb on - strandat 163.078 kb on + strandat 163.078 kb on + strandat 163.078 kb on + strandat 163.079 kb on - strandat 163.079 kb on - strandat 163.079 kb on - strandat 163.079 kb on - strandat 163.079 kb on - strandat 163.080 kb on + strandat 163.081 kb on - strandat 163.081 kb on - strandat 163.127 kb on + strandat 163.128 kb on - strandat 163.140 kb on + strandat 163.140 kb on + strandat 163.142 kb on + strandat 163.142 kb on + strandat 163.143 kb on - strandat 163.143 kb on - strandat 163.143 kb on - strandat 163.144 kb on + strandat 163.144 kb on + strandat 163.144 kb on + strandat 163.144 kb on + strandat 163.144 kb on + strandat 163.145 kb on - strandat 163.145 kb on - strandat 163.153 kb on + strandat 163.153 kb on + strandat 163.154 kb on - strandat 163.154 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml
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160,748 - CA264_00745 0.81 +0.1
160,786 - CA264_00745 0.86 +1.1
160,787 + CA264_00745 0.86 -0.1
160,787 + CA264_00745 0.86 -1.0
160,788 - CA264_00745 0.86 +0.4
160,818 + -0.9
160,818 + +0.2
160,882 + -0.4
160,883 - -0.1
160,898 + -0.1
160,911 - -2.0
160,934 - -1.5
160,987 + +0.3
160,999 + -0.8
160,999 + +0.7
161,000 - -0.4
161,003 + -0.6
161,041 + -0.3
161,043 + -0.3
161,067 - CA264_00750 0.15 +0.2
161,067 - CA264_00750 0.15 -0.7
161,067 - CA264_00750 0.15 -0.5
161,076 - CA264_00750 0.18 -0.6
161,109 - CA264_00750 0.27 -0.8
161,147 + CA264_00750 0.37 -1.1
161,179 + CA264_00750 0.46 -0.2
161,244 + CA264_00750 0.63 +2.2
161,246 + CA264_00750 0.64 -1.3
161,246 + CA264_00750 0.64 -1.2
161,246 + CA264_00750 0.64 -1.6
161,247 - CA264_00750 0.64 +0.7
161,247 - CA264_00750 0.64 +0.1
161,247 - CA264_00750 0.64 -1.2
161,250 + CA264_00750 0.65 -0.2
161,250 + CA264_00750 0.65 +1.4
161,251 - CA264_00750 0.65 -0.0
161,251 - CA264_00750 0.65 -0.8
161,253 - CA264_00750 0.66 -1.5
161,253 - CA264_00750 0.66 -2.1
161,303 + CA264_00750 0.79 -2.4
161,303 + CA264_00750 0.79 -0.3
161,303 + CA264_00750 0.79 +0.8
161,304 - CA264_00750 0.79 +0.1
161,304 - CA264_00750 0.79 -1.6
161,313 - CA264_00750 0.82 -1.0
161,333 - CA264_00750 0.87 +0.0
161,347 - -0.2
161,347 - -0.1
161,507 + -2.0
161,508 - -1.1
161,553 + -0.1
161,597 + -0.0
161,597 + -0.3
161,598 - +1.0
161,622 - -0.5
161,648 - -1.1
161,670 + -0.9
161,671 - -0.4
161,750 + +0.5
161,755 + -1.3
161,755 + -0.1
161,756 - -0.5
161,812 - CA264_00755 0.11 -0.0
161,831 + CA264_00755 0.13 -1.2
161,840 - CA264_00755 0.13 -1.4
161,862 + CA264_00755 0.15 -1.3
161,872 + CA264_00755 0.16 -1.7
161,872 + CA264_00755 0.16 -0.1
161,872 + CA264_00755 0.16 -0.9
161,873 - CA264_00755 0.16 +0.0
161,873 - CA264_00755 0.16 +0.2
161,873 - CA264_00755 0.16 -0.6
161,878 + CA264_00755 0.16 -0.7
161,935 - CA264_00755 0.21 -1.2
161,954 - CA264_00755 0.23 -0.3
162,093 + CA264_00755 0.34 -0.5
162,135 - CA264_00755 0.37 -3.0
162,135 - CA264_00755 0.37 -1.8
162,135 - CA264_00755 0.37 -2.1
162,138 + CA264_00755 0.37 -0.7
162,138 + CA264_00755 0.37 +0.2
162,139 - CA264_00755 0.37 -0.9
162,140 + CA264_00755 0.37 -0.9
162,285 - CA264_00755 0.49 +0.2
162,310 + CA264_00755 0.51 -0.5
162,310 + CA264_00755 0.51 -2.2
162,310 + CA264_00755 0.51 -1.1
162,311 - CA264_00755 0.51 +0.8
162,311 - CA264_00755 0.51 +0.4
162,328 + CA264_00755 0.52 +1.5
162,329 - CA264_00755 0.52 -0.8
162,348 + CA264_00755 0.54 -1.3
162,390 - CA264_00755 0.57 -0.9
162,462 - CA264_00755 0.63 -1.2
162,462 - CA264_00755 0.63 -1.0
162,524 - CA264_00755 0.68 -0.4
162,524 - CA264_00755 0.68 -0.0
162,555 + CA264_00755 0.70 -0.4
162,555 + CA264_00755 0.70 -1.9
162,556 - CA264_00755 0.70 -1.1
162,558 + CA264_00755 0.71 -1.4
162,559 - CA264_00755 0.71 -0.5
162,562 + CA264_00755 0.71 -0.9
162,562 + CA264_00755 0.71 +0.7
162,725 - CA264_00755 0.84 -1.2
162,763 - CA264_00755 0.87 -0.7
162,787 + CA264_00755 0.89 -0.2
162,788 - CA264_00755 0.89 -1.8
162,788 - CA264_00755 0.89 +0.2
162,788 - CA264_00755 0.89 -0.3
162,836 + -2.7
162,837 - +0.3
162,841 + -1.9
162,842 - -0.0
162,842 - -0.4
162,861 + -1.4
162,862 - -0.8
162,870 - +1.7
162,918 + -0.9
162,923 + +0.8
162,924 - -0.5
162,924 - -0.2
162,924 - -0.3
162,924 - +0.3
162,926 - +0.2
162,926 - -0.1
162,929 - +0.2
162,944 + -0.9
162,944 + -0.1
162,948 + -1.7
162,972 - +0.5
162,976 - -0.8
163,078 + -1.7
163,078 + -3.0
163,078 + +0.0
163,079 - -1.4
163,079 - -0.3
163,079 - -0.5
163,079 - +0.0
163,079 - -0.2
163,080 + -0.6
163,081 - +0.9
163,081 - +0.4
163,127 + -0.5
163,128 - +0.1
163,140 + -1.1
163,140 + -1.2
163,142 + +0.5
163,142 + -0.0
163,143 - -0.6
163,143 - -0.7
163,143 - +0.5
163,144 + -1.1
163,144 + +1.4
163,144 + +0.3
163,144 + -0.8
163,144 + -1.5
163,145 - -0.1
163,145 - -0.7
163,153 + -1.1
163,153 + +0.9
163,154 - -0.5
163,154 - -1.0

Or see this region's nucleotide sequence