Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_00330

Experiment: m.b. Thallium(I) acetate 0.001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_00320 and CA264_00325 are separated by 108 nucleotidesCA264_00325 and CA264_00330 are separated by 422 nucleotidesCA264_00330 and CA264_00335 overlap by 23 nucleotides CA264_00320: CA264_00320 - hypothetical protein, at 74,641 to 75,291 _00320 CA264_00325: CA264_00325 - hypothetical protein, at 75,400 to 75,771 _00325 CA264_00330: CA264_00330 - hypothetical protein, at 76,194 to 76,925 _00330 CA264_00335: CA264_00335 - dicarboxylate/amino acid:cation symporter, at 76,903 to 78,207 _00335 Position (kb) 76 77Strain fitness (log2 ratio) -1 0 1 2 3at 75.261 kb on + strandat 75.311 kb on - strandat 75.393 kb on - strandat 75.423 kb on - strandat 75.423 kb on - strandat 75.426 kb on + strandat 75.554 kb on + strand, within CA264_00325at 75.555 kb on - strand, within CA264_00325at 75.608 kb on + strand, within CA264_00325at 75.669 kb on + strand, within CA264_00325at 75.669 kb on + strand, within CA264_00325at 75.689 kb on + strand, within CA264_00325at 75.690 kb on - strand, within CA264_00325at 75.690 kb on - strand, within CA264_00325at 75.738 kb on - strandat 75.871 kb on + strandat 75.872 kb on - strandat 76.024 kb on - strandat 76.167 kb on - strandat 76.207 kb on + strandat 76.208 kb on - strandat 76.208 kb on - strandat 76.211 kb on + strandat 76.211 kb on + strandat 76.211 kb on + strandat 76.326 kb on + strand, within CA264_00330at 76.327 kb on - strand, within CA264_00330at 76.419 kb on + strand, within CA264_00330at 76.424 kb on + strand, within CA264_00330at 76.564 kb on - strand, within CA264_00330at 76.582 kb on - strand, within CA264_00330at 76.708 kb on - strand, within CA264_00330at 76.723 kb on + strand, within CA264_00330at 76.821 kb on - strand, within CA264_00330at 76.822 kb on + strand, within CA264_00330at 76.823 kb on - strand, within CA264_00330at 76.823 kb on - strand, within CA264_00330at 76.826 kb on + strand, within CA264_00330at 76.827 kb on - strand, within CA264_00330at 76.897 kb on + strandat 76.898 kb on - strandat 76.899 kb on + strandat 76.900 kb on - strandat 76.900 kb on - strandat 76.900 kb on - strandat 76.905 kb on - strandat 76.905 kb on - strandat 76.905 kb on - strandat 76.905 kb on - strandat 76.905 kb on - strandat 76.906 kb on + strandat 77.032 kb on + strandat 77.032 kb on + strandat 77.074 kb on + strand, within CA264_00335at 77.222 kb on + strand, within CA264_00335at 77.860 kb on - strand, within CA264_00335

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml
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75,261 + +1.3
75,311 - +0.5
75,393 - -0.5
75,423 - +0.4
75,423 - +0.1
75,426 + +1.1
75,554 + CA264_00325 0.41 +1.5
75,555 - CA264_00325 0.42 +0.5
75,608 + CA264_00325 0.56 +1.6
75,669 + CA264_00325 0.72 +2.5
75,669 + CA264_00325 0.72 +2.6
75,689 + CA264_00325 0.78 +1.8
75,690 - CA264_00325 0.78 -0.1
75,690 - CA264_00325 0.78 +0.9
75,738 - +0.6
75,871 + +1.6
75,872 - +0.8
76,024 - +0.6
76,167 - +1.7
76,207 + +2.2
76,208 - +0.6
76,208 - +1.4
76,211 + +1.9
76,211 + +0.5
76,211 + +1.8
76,326 + CA264_00330 0.18 +2.2
76,327 - CA264_00330 0.18 +1.2
76,419 + CA264_00330 0.31 +1.5
76,424 + CA264_00330 0.31 +2.1
76,564 - CA264_00330 0.51 +1.1
76,582 - CA264_00330 0.53 +0.7
76,708 - CA264_00330 0.70 +1.6
76,723 + CA264_00330 0.72 +2.2
76,821 - CA264_00330 0.86 +1.2
76,822 + CA264_00330 0.86 +3.1
76,823 - CA264_00330 0.86 +1.7
76,823 - CA264_00330 0.86 +2.2
76,826 + CA264_00330 0.86 +1.9
76,827 - CA264_00330 0.86 -0.3
76,897 + +0.1
76,898 - +0.6
76,899 + +2.1
76,900 - +0.8
76,900 - +1.2
76,900 - +1.1
76,905 - +1.1
76,905 - +0.5
76,905 - +1.2
76,905 - +0.5
76,905 - +2.2
76,906 + +1.8
77,032 + +1.6
77,032 + +1.6
77,074 + CA264_00335 0.13 +2.3
77,222 + CA264_00335 0.24 +2.0
77,860 - CA264_00335 0.73 +2.1

Or see this region's nucleotide sequence