Experiment: Tween 20 (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS08700 and ABID97_RS08705 are separated by 132 nucleotides ABID97_RS08705 and ABID97_RS08710 are separated by 18 nucleotides ABID97_RS08710 and ABID97_RS08715 overlap by 4 nucleotides ABID97_RS08715 and ABID97_RS08720 are separated by 114 nucleotides
ABID97_RS08700: ABID97_RS08700 - phosphoribosylformylglycinamidine cyclo-ligase, at 1,824,736 to 1,825,776
_RS08700
ABID97_RS08705: ABID97_RS08705 - DnaA regulatory inactivator Hda, at 1,825,909 to 1,826,595
_RS08705
ABID97_RS08710: ABID97_RS08710 - polynucleotide adenylyltransferase PcnB, at 1,826,614 to 1,828,254
_RS08710
ABID97_RS08715: ABID97_RS08715 - 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase, at 1,828,251 to 1,828,907
_RS08715
ABID97_RS08720: ABID97_RS08720 - DUF47 domain-containing protein, at 1,829,022 to 1,829,666
_RS08720
Position (kb) 1826
1827
1828
1829 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 1825.745 kb on + strand at 1825.871 kb on + strand at 1825.871 kb on + strand at 1826.593 kb on + strand at 1826.593 kb on + strand at 1826.594 kb on - strand at 1826.594 kb on - strand at 1826.791 kb on + strand, within ABID97_RS08710 at 1826.791 kb on + strand, within ABID97_RS08710 at 1826.791 kb on + strand, within ABID97_RS08710 at 1826.791 kb on + strand, within ABID97_RS08710 at 1826.791 kb on + strand, within ABID97_RS08710 at 1826.792 kb on - strand, within ABID97_RS08710 at 1826.992 kb on + strand, within ABID97_RS08710 at 1826.992 kb on + strand, within ABID97_RS08710 at 1826.992 kb on + strand, within ABID97_RS08710 at 1826.992 kb on + strand, within ABID97_RS08710 at 1827.163 kb on + strand, within ABID97_RS08710 at 1827.163 kb on + strand, within ABID97_RS08710 at 1827.163 kb on + strand, within ABID97_RS08710 at 1827.163 kb on + strand, within ABID97_RS08710 at 1827.163 kb on + strand, within ABID97_RS08710 at 1827.164 kb on - strand, within ABID97_RS08710 at 1827.164 kb on - strand, within ABID97_RS08710 at 1827.164 kb on - strand, within ABID97_RS08710 at 1827.164 kb on - strand, within ABID97_RS08710 at 1827.164 kb on - strand, within ABID97_RS08710 at 1827.164 kb on - strand, within ABID97_RS08710 at 1827.166 kb on + strand, within ABID97_RS08710 at 1827.167 kb on - strand, within ABID97_RS08710 at 1827.196 kb on + strand, within ABID97_RS08710 at 1827.493 kb on + strand, within ABID97_RS08710 at 1827.494 kb on - strand, within ABID97_RS08710 at 1827.494 kb on - strand, within ABID97_RS08710 at 1827.832 kb on + strand, within ABID97_RS08710 at 1828.957 kb on - strand at 1829.130 kb on + strand, within ABID97_RS08720 at 1829.130 kb on + strand, within ABID97_RS08720 at 1829.130 kb on + strand, within ABID97_RS08720 at 1829.130 kb on + strand, within ABID97_RS08720 at 1829.131 kb on - strand, within ABID97_RS08720 at 1829.157 kb on + strand, within ABID97_RS08720 at 1829.157 kb on + strand, within ABID97_RS08720 at 1829.157 kb on + strand, within ABID97_RS08720 at 1829.157 kb on + strand, within ABID97_RS08720 at 1829.158 kb on - strand, within ABID97_RS08720 at 1829.158 kb on - strand, within ABID97_RS08720 at 1829.158 kb on - strand, within ABID97_RS08720 at 1829.158 kb on - strand, within ABID97_RS08720 at 1829.158 kb on - strand, within ABID97_RS08720
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C) remove 1,825,745 + -0.3 1,825,871 + +1.1 1,825,871 + +0.0 1,826,593 + -0.1 1,826,593 + -0.2 1,826,594 - -0.7 1,826,594 - -0.2 1,826,791 + ABID97_RS08710 0.11 -0.7 1,826,791 + ABID97_RS08710 0.11 +1.1 1,826,791 + ABID97_RS08710 0.11 -0.9 1,826,791 + ABID97_RS08710 0.11 +0.1 1,826,791 + ABID97_RS08710 0.11 -1.1 1,826,792 - ABID97_RS08710 0.11 -2.6 1,826,992 + ABID97_RS08710 0.23 -0.9 1,826,992 + ABID97_RS08710 0.23 -0.3 1,826,992 + ABID97_RS08710 0.23 -3.5 1,826,992 + ABID97_RS08710 0.23 -1.3 1,827,163 + ABID97_RS08710 0.33 +1.7 1,827,163 + ABID97_RS08710 0.33 -0.7 1,827,163 + ABID97_RS08710 0.33 -1.6 1,827,163 + ABID97_RS08710 0.33 +0.1 1,827,163 + ABID97_RS08710 0.33 -0.8 1,827,164 - ABID97_RS08710 0.34 -0.7 1,827,164 - ABID97_RS08710 0.34 -0.7 1,827,164 - ABID97_RS08710 0.34 -1.5 1,827,164 - ABID97_RS08710 0.34 -0.9 1,827,164 - ABID97_RS08710 0.34 -0.3 1,827,164 - ABID97_RS08710 0.34 -1.4 1,827,166 + ABID97_RS08710 0.34 +0.7 1,827,167 - ABID97_RS08710 0.34 -0.6 1,827,196 + ABID97_RS08710 0.35 +0.3 1,827,493 + ABID97_RS08710 0.54 -0.9 1,827,494 - ABID97_RS08710 0.54 -1.1 1,827,494 - ABID97_RS08710 0.54 -1.1 1,827,832 + ABID97_RS08710 0.74 +0.3 1,828,957 - -0.5 1,829,130 + ABID97_RS08720 0.17 -0.1 1,829,130 + ABID97_RS08720 0.17 -0.4 1,829,130 + ABID97_RS08720 0.17 -0.2 1,829,130 + ABID97_RS08720 0.17 -0.8 1,829,131 - ABID97_RS08720 0.17 -0.3 1,829,157 + ABID97_RS08720 0.21 -0.0 1,829,157 + ABID97_RS08720 0.21 -0.4 1,829,157 + ABID97_RS08720 0.21 -0.9 1,829,157 + ABID97_RS08720 0.21 -0.5 1,829,158 - ABID97_RS08720 0.21 -0.7 1,829,158 - ABID97_RS08720 0.21 -0.4 1,829,158 - ABID97_RS08720 0.21 -0.3 1,829,158 - ABID97_RS08720 0.21 -0.3 1,829,158 - ABID97_RS08720 0.21 +0.2
Or see this region's nucleotide sequence