Strain Fitness in Variovorax sp. OAS795 around ABID97_RS05680

Experiment: Tween 20 (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tween 20 (C)
1,193,326	+				-1.4
1,193,327	-				+0.8
1,193,327	-				-1.2
1,193,327	-				-1.7
1,193,327	-				-0.5
1,193,354	+				-0.6
1,193,354	+				-0.7
1,193,355	-				-1.1
1,193,979	+				-0.3
1,193,980	-				-0.1
1,194,065	+				-0.6
1,194,065	+				-2.1
1,194,065	+				+0.8
1,194,065	+				+0.5
1,194,065	+				-1.6
1,194,065	+				-1.3
1,194,065	+				+1.4
1,194,066	-				+0.3
1,194,066	-				-0.1
1,194,066	-				+0.6
1,194,066	-				+0.4
1,194,066	-				+1.8
1,194,084	+				+0.2
1,194,084	+				-1.0
1,194,084	+				-1.2
1,194,084	+				+1.8
1,194,084	+				+0.2
1,194,085	-				-0.4
1,194,085	-				-0.9
1,194,085	-				-1.7
1,194,085	-				-0.0
1,194,088	+				-0.2
1,194,088	+				-0.0
1,194,089	-				+0.8
1,194,089	-				+0.1
1,194,350	+		ABID97_RS05680	0.11	+0.6
1,194,351	-		ABID97_RS05680	0.11	-0.5
1,194,371	+		ABID97_RS05680	0.12	-0.3
1,194,371	+		ABID97_RS05680	0.12	+0.2
1,194,371	+		ABID97_RS05680	0.12	-2.3
1,194,371	+		ABID97_RS05680	0.12	-1.8
1,194,371	+		ABID97_RS05680	0.12	+0.2
1,194,372	-				+2.8
1,194,372	-		ABID97_RS05680	0.12	+0.2
1,194,372	-		ABID97_RS05680	0.12	+0.4
1,194,401	+		ABID97_RS05680	0.13	+0.2
1,194,401	+		ABID97_RS05680	0.13	-0.0
1,194,401	+		ABID97_RS05680	0.13	-0.0
1,194,404	+		ABID97_RS05680	0.13	+0.5
1,194,404	+		ABID97_RS05680	0.13	+0.3
1,194,405	-		ABID97_RS05680	0.13	+0.0
1,194,405	-		ABID97_RS05680	0.13	-0.1
1,194,405	-		ABID97_RS05680	0.13	-0.1
1,194,416	+		ABID97_RS05680	0.13	+0.9
1,194,482	+		ABID97_RS05680	0.15	+0.3
1,194,482	+		ABID97_RS05680	0.15	+0.6
1,194,483	-		ABID97_RS05680	0.15	+1.8
1,194,483	-		ABID97_RS05680	0.15	+0.1
1,194,483	-		ABID97_RS05680	0.15	+0.4
1,194,501	-		ABID97_RS05680	0.16	+1.1
1,194,501	-		ABID97_RS05680	0.16	-0.1
1,194,584	+		ABID97_RS05680	0.19	+0.8
1,194,585	-		ABID97_RS05680	0.19	+0.1
1,194,586	+		ABID97_RS05680	0.19	+0.5
1,194,586	+		ABID97_RS05680	0.19	+0.1
1,194,587	-		ABID97_RS05680	0.19	+0.2
1,194,655	+		ABID97_RS05680	0.21	+0.2
1,194,656	-		ABID97_RS05680	0.21	+0.3
1,194,656	-		ABID97_RS05680	0.21	+1.4
1,194,657	+		ABID97_RS05680	0.21	-0.2
1,194,657	+		ABID97_RS05680	0.21	+0.1
1,194,657	+		ABID97_RS05680	0.21	+0.8
1,194,658	-		ABID97_RS05680	0.21	-0.1
1,194,658	-		ABID97_RS05680	0.21	+0.0
1,194,658	-		ABID97_RS05680	0.21	-1.5
1,194,658	-		ABID97_RS05680	0.21	-2.2
1,194,658	-		ABID97_RS05680	0.21	-0.8
1,194,701	+		ABID97_RS05680	0.23	+0.7
1,194,701	+		ABID97_RS05680	0.23	+0.3
1,194,701	+		ABID97_RS05680	0.23	+0.2
1,194,702	-		ABID97_RS05680	0.23	+0.4
1,194,734	+		ABID97_RS05680	0.24	+0.9
1,194,735	-		ABID97_RS05680	0.24	+0.3
1,194,735	-		ABID97_RS05680	0.24	+0.3
1,194,830	+		ABID97_RS05680	0.27	-0.5
1,194,831	-		ABID97_RS05680	0.27	+0.5
1,194,873	+		ABID97_RS05680	0.28	+0.0
1,194,874	-		ABID97_RS05680	0.28	-3.3
1,194,874	-		ABID97_RS05680	0.28	-1.8
1,194,874	-		ABID97_RS05680	0.28	-1.8
1,194,877	+		ABID97_RS05680	0.29	+0.2
1,194,877	+		ABID97_RS05680	0.29	-0.0
1,194,877	+		ABID97_RS05680	0.29	+1.1
1,194,877	+		ABID97_RS05680	0.29	+0.1
1,194,877	+		ABID97_RS05680	0.29	+0.3
1,194,877	+		ABID97_RS05680	0.29	+0.4
1,194,877	+		ABID97_RS05680	0.29	+0.3
1,194,877	+		ABID97_RS05680	0.29	+0.1
1,194,878	-		ABID97_RS05680	0.29	+0.1
1,194,878	-		ABID97_RS05680	0.29	+0.2
1,194,878	-		ABID97_RS05680	0.29	+0.2
1,194,878	-		ABID97_RS05680	0.29	+0.6
1,194,878	-		ABID97_RS05680	0.29	-0.1
1,194,878	-		ABID97_RS05680	0.29	-0.1
1,195,371	+		ABID97_RS05680	0.45	+0.3
1,195,371	+		ABID97_RS05680	0.45	-0.1
1,195,371	+		ABID97_RS05680	0.45	+0.5
1,195,372	-		ABID97_RS05680	0.45	+0.6
1,195,372	-		ABID97_RS05680	0.45	-0.4
1,195,372	-		ABID97_RS05680	0.45	-0.3
1,195,398	+		ABID97_RS05680	0.46	+0.5
1,195,399	-		ABID97_RS05680	0.46	-1.2
1,195,399	-		ABID97_RS05680	0.46	+0.5
1,195,399	-		ABID97_RS05680	0.46	-0.9
1,195,487	+		ABID97_RS05680	0.49	+0.3
1,195,487	+		ABID97_RS05680	0.49	-2.7
1,195,487	+		ABID97_RS05680	0.49	+0.5
1,195,488	-		ABID97_RS05680	0.49	+0.5
1,195,488	-		ABID97_RS05680	0.49	+0.4
1,195,686	+		ABID97_RS05680	0.55	+0.0
1,195,686	+		ABID97_RS05680	0.55	-0.2
1,195,686	+		ABID97_RS05680	0.55	+0.8
1,195,686	+		ABID97_RS05680	0.55	-0.1
1,195,687	-		ABID97_RS05680	0.55	-0.6
1,195,718	+		ABID97_RS05680	0.56	+0.8
1,195,718	+		ABID97_RS05680	0.56	+0.2
1,195,718	+		ABID97_RS05680	0.56	+0.1
1,195,719	-		ABID97_RS05680	0.56	+0.2
1,195,719	-		ABID97_RS05680	0.56	+0.3
1,195,719	-		ABID97_RS05680	0.56	+0.5
1,195,735	+		ABID97_RS05680	0.57	+0.3
1,195,736	-		ABID97_RS05680	0.57	-0.5
1,195,842	+		ABID97_RS05680	0.60	+0.9
1,195,842	+		ABID97_RS05680	0.60	-0.1
1,195,842	+		ABID97_RS05680	0.60	+0.3
1,195,842	+		ABID97_RS05680	0.60	+0.2
1,195,842	+		ABID97_RS05680	0.60	+0.1
1,195,842	+		ABID97_RS05680	0.60	+0.3
1,195,842	+		ABID97_RS05680	0.60	+0.4
1,195,842	+		ABID97_RS05680	0.60	+0.1
1,195,842	+		ABID97_RS05680	0.60	+0.2
1,195,843	-		ABID97_RS05680	0.60	+0.3
1,195,843	-		ABID97_RS05680	0.60	+0.7
1,195,843	-		ABID97_RS05680	0.60	-0.4
1,195,843	-		ABID97_RS05680	0.60	+0.5
1,195,843	-		ABID97_RS05680	0.60	-0.2
1,195,843	-		ABID97_RS05680	0.60	+0.6
1,195,843	-		ABID97_RS05680	0.60	+0.6
1,195,843	-		ABID97_RS05680	0.60	-0.3
1,195,850	+		ABID97_RS05680	0.61	+0.3
1,195,851	-		ABID97_RS05680	0.61	+0.2
1,195,881	+		ABID97_RS05680	0.62	+0.2
1,195,994	+		ABID97_RS05680	0.65	-0.2
1,196,243	+		ABID97_RS05680	0.74	+0.2
1,196,243	+		ABID97_RS05680	0.74	+0.6
1,196,243	+		ABID97_RS05680	0.74	-1.1
1,196,244	-		ABID97_RS05680	0.74	+0.3
1,196,244	-		ABID97_RS05680	0.74	+0.6
1,196,244	-		ABID97_RS05680	0.74	-0.1
1,196,244	-		ABID97_RS05680	0.74	+0.4
1,196,244	-		ABID97_RS05680	0.74	+0.1
1,196,244	-		ABID97_RS05680	0.74	+0.1
1,196,244	-		ABID97_RS05680	0.74	+0.2
1,196,244	-		ABID97_RS05680	0.74	-0.2
1,196,345	+		ABID97_RS05680	0.77	-0.0
1,196,346	-		ABID97_RS05680	0.77	+0.2
1,196,391	+		ABID97_RS05680	0.79	+0.3
1,196,392	-		ABID97_RS05680	0.79	+0.1
1,196,473	+		ABID97_RS05680	0.81	-0.0
1,196,490	+		ABID97_RS05680	0.82	+0.9
1,196,491	-		ABID97_RS05680	0.82	-0.5
1,196,661	+		ABID97_RS05680	0.87	+0.4
1,196,661	+		ABID97_RS05680	0.87	+0.9
1,196,661	+		ABID97_RS05680	0.87	+0.3
1,196,661	+		ABID97_RS05680	0.87	+0.3
1,196,661	+		ABID97_RS05680	0.87	+0.4
1,196,662	-		ABID97_RS05680	0.87	+0.4
1,196,662	-		ABID97_RS05680	0.87	+0.3
1,196,662	-		ABID97_RS05680	0.87	+0.1
1,196,701	-		ABID97_RS05680	0.89	-0.2
1,196,732	+		ABID97_RS05680	0.90	+0.2
1,196,732	+		ABID97_RS05680	0.90	+0.6
1,196,733	-		ABID97_RS05680	0.90	+0.2
1,196,733	-		ABID97_RS05680	0.90	+0.9
1,196,733	-		ABID97_RS05680	0.90	+1.1
1,197,003	+				+2.0
1,197,003	+				+0.8
1,197,003	+				+0.4
1,197,003	+				-0.0
1,197,003	+				+0.3
1,197,004	-				+0.4
1,197,004	-				+0.3
1,197,004	-				+0.8
1,197,004	-				+1.2
1,197,005	+				+0.2
1,197,005	+				+0.8
1,197,005	+				+0.2
1,197,006	-				+0.4
1,197,006	-				+0.2
1,197,006	-				+0.4
1,197,093	+				-0.0
1,197,093	+				-0.4
1,197,093	+				+0.2
1,197,093	+				+0.2
1,197,093	+				+0.9
1,197,093	+				+0.3
1,197,094	-				-0.0
1,197,094	-				-1.4
1,197,171	+				+0.9
1,197,171	+				+0.0
1,197,171	+				+0.3
1,197,795	+		ABID97_RS05685	0.39	+0.5
1,197,796	-		ABID97_RS05685	0.39	+1.8
1,197,796	-		ABID97_RS05685	0.39	+0.3
1,197,796	-		ABID97_RS05685	0.39	+0.7