Experiment: Tween 20 (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS05620 and ABID97_RS05625 are separated by 41 nucleotides ABID97_RS05625 and ABID97_RS05630 overlap by 4 nucleotides ABID97_RS05630 and ABID97_RS05635 are separated by 102 nucleotides
ABID97_RS05620: ABID97_RS05620 - PLP-dependent aminotransferase family protein, at 1,180,612 to 1,181,814
_RS05620
ABID97_RS05625: ABID97_RS05625 - DMT family transporter, at 1,181,856 to 1,182,809
_RS05625
ABID97_RS05630: ABID97_RS05630 - LysE family translocator, at 1,182,806 to 1,183,405
_RS05630
ABID97_RS05635: ABID97_RS05635 - PLP-dependent aminotransferase family protein, at 1,183,508 to 1,184,923
_RS05635
Position (kb) 1181
1182
1183 Strain fitness (log2 ratio) -2
-1
0
1 at 1180.949 kb on + strand, within ABID97_RS05620 at 1181.076 kb on - strand, within ABID97_RS05620 at 1181.076 kb on - strand, within ABID97_RS05620 at 1181.076 kb on - strand, within ABID97_RS05620 at 1181.076 kb on - strand, within ABID97_RS05620 at 1181.148 kb on - strand, within ABID97_RS05620 at 1181.148 kb on - strand, within ABID97_RS05620 at 1181.148 kb on - strand, within ABID97_RS05620 at 1181.235 kb on + strand, within ABID97_RS05620 at 1181.330 kb on + strand, within ABID97_RS05620 at 1181.331 kb on - strand, within ABID97_RS05620 at 1181.451 kb on - strand, within ABID97_RS05620 at 1182.012 kb on + strand, within ABID97_RS05625 at 1182.012 kb on + strand, within ABID97_RS05625 at 1182.013 kb on - strand, within ABID97_RS05625 at 1182.013 kb on - strand, within ABID97_RS05625 at 1182.124 kb on + strand, within ABID97_RS05625 at 1182.124 kb on + strand, within ABID97_RS05625 at 1182.125 kb on - strand, within ABID97_RS05625 at 1182.268 kb on + strand, within ABID97_RS05625 at 1182.269 kb on - strand, within ABID97_RS05625 at 1182.269 kb on - strand, within ABID97_RS05625 at 1182.269 kb on - strand, within ABID97_RS05625 at 1182.274 kb on + strand, within ABID97_RS05625 at 1182.523 kb on + strand, within ABID97_RS05625 at 1182.524 kb on - strand, within ABID97_RS05625 at 1182.809 kb on + strand at 1182.809 kb on + strand at 1182.809 kb on + strand at 1182.809 kb on + strand at 1182.809 kb on + strand at 1182.809 kb on + strand at 1182.924 kb on + strand, within ABID97_RS05630 at 1182.924 kb on + strand, within ABID97_RS05630 at 1182.924 kb on + strand, within ABID97_RS05630 at 1182.924 kb on + strand, within ABID97_RS05630 at 1182.925 kb on - strand, within ABID97_RS05630 at 1182.925 kb on - strand, within ABID97_RS05630 at 1182.925 kb on - strand, within ABID97_RS05630 at 1182.925 kb on - strand, within ABID97_RS05630 at 1182.925 kb on - strand, within ABID97_RS05630 at 1182.948 kb on + strand, within ABID97_RS05630 at 1182.949 kb on - strand, within ABID97_RS05630 at 1183.092 kb on + strand, within ABID97_RS05630 at 1183.161 kb on + strand, within ABID97_RS05630 at 1183.410 kb on + strand at 1183.411 kb on - strand at 1183.411 kb on - strand at 1183.472 kb on + strand at 1183.649 kb on + strand at 1183.721 kb on + strand, within ABID97_RS05635 at 1183.722 kb on - strand, within ABID97_RS05635 at 1183.722 kb on - strand, within ABID97_RS05635 at 1183.722 kb on - strand, within ABID97_RS05635
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C) remove 1,180,949 + ABID97_RS05620 0.28 +0.0 1,181,076 - ABID97_RS05620 0.39 -0.4 1,181,076 - ABID97_RS05620 0.39 -1.0 1,181,076 - ABID97_RS05620 0.39 +0.2 1,181,076 - ABID97_RS05620 0.39 -0.6 1,181,148 - ABID97_RS05620 0.45 -0.5 1,181,148 - ABID97_RS05620 0.45 -0.0 1,181,148 - ABID97_RS05620 0.45 +0.2 1,181,235 + ABID97_RS05620 0.52 +0.2 1,181,330 + ABID97_RS05620 0.60 -1.0 1,181,331 - ABID97_RS05620 0.60 -0.1 1,181,451 - ABID97_RS05620 0.70 -0.2 1,182,012 + ABID97_RS05625 0.16 +0.1 1,182,012 + ABID97_RS05625 0.16 -0.5 1,182,013 - ABID97_RS05625 0.16 +0.1 1,182,013 - ABID97_RS05625 0.16 -0.2 1,182,124 + ABID97_RS05625 0.28 +0.2 1,182,124 + ABID97_RS05625 0.28 +0.7 1,182,125 - ABID97_RS05625 0.28 -0.5 1,182,268 + ABID97_RS05625 0.43 +0.5 1,182,269 - ABID97_RS05625 0.43 -0.3 1,182,269 - ABID97_RS05625 0.43 -0.1 1,182,269 - ABID97_RS05625 0.43 -0.1 1,182,274 + ABID97_RS05625 0.44 +0.0 1,182,523 + ABID97_RS05625 0.70 +0.1 1,182,524 - ABID97_RS05625 0.70 +0.2 1,182,809 + +0.8 1,182,809 + +0.2 1,182,809 + -0.2 1,182,809 + -0.1 1,182,809 + +0.7 1,182,809 + +0.1 1,182,924 + ABID97_RS05630 0.20 -0.9 1,182,924 + ABID97_RS05630 0.20 -0.8 1,182,924 + ABID97_RS05630 0.20 -0.9 1,182,924 + ABID97_RS05630 0.20 -0.3 1,182,925 - ABID97_RS05630 0.20 -0.6 1,182,925 - ABID97_RS05630 0.20 +0.4 1,182,925 - ABID97_RS05630 0.20 +0.2 1,182,925 - ABID97_RS05630 0.20 +0.3 1,182,925 - ABID97_RS05630 0.20 +0.6 1,182,948 + ABID97_RS05630 0.24 -0.1 1,182,949 - ABID97_RS05630 0.24 -0.1 1,183,092 + ABID97_RS05630 0.48 -0.2 1,183,161 + ABID97_RS05630 0.59 +0.2 1,183,410 + -2.2 1,183,411 - -1.0 1,183,411 - +0.4 1,183,472 + -0.5 1,183,649 + -0.1 1,183,721 + ABID97_RS05635 0.15 -1.0 1,183,722 - ABID97_RS05635 0.15 +0.3 1,183,722 - ABID97_RS05635 0.15 +0.6 1,183,722 - ABID97_RS05635 0.15 -0.1
Or see this region's nucleotide sequence