Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS30090

Experiment: D-Glucose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C); with MOPS
6,693,870	+		PFLU_RS30085	0.83	+0.2
6,693,870	+		PFLU_RS30085	0.83	+0.9
6,693,871	-		PFLU_RS30085	0.83	+1.0
6,693,871	-		PFLU_RS30085	0.83	-0.7
6,693,885	+		PFLU_RS30085	0.83	-0.4
6,693,886	-		PFLU_RS30085	0.83	-0.0
6,693,886	-		PFLU_RS30085	0.83	+0.2
6,693,886	-		PFLU_RS30085	0.83	+0.9
6,693,886	-		PFLU_RS30085	0.83	+0.2
6,693,956	+		PFLU_RS30085	0.84	-1.0
6,693,956	+		PFLU_RS30085	0.84	+0.0
6,693,956	+		PFLU_RS30085	0.84	+0.3
6,693,957	-		PFLU_RS30085	0.84	-0.0
6,693,957	-		PFLU_RS30085	0.84	-1.5
6,693,957	-		PFLU_RS30085	0.84	+0.7
6,693,979	-		PFLU_RS30085	0.85	+0.1
6,693,979	-		PFLU_RS30085	0.85	-0.1
6,693,979	-		PFLU_RS30085	0.85	-1.3
6,693,979	-		PFLU_RS30085	0.85	+0.4
6,693,981	+		PFLU_RS30085	0.85	+0.7
6,693,981	+		PFLU_RS30085	0.85	-0.0
6,693,981	+		PFLU_RS30085	0.85	-1.2
6,693,982	-		PFLU_RS30085	0.85	+2.1
6,694,104	+		PFLU_RS30085	0.87	-1.7
6,694,105	-		PFLU_RS30085	0.87	+0.2
6,694,105	-		PFLU_RS30085	0.87	-0.7
6,694,105	-		PFLU_RS30085	0.87	+1.4
6,694,149	+		PFLU_RS30085	0.88	-0.3
6,694,149	+		PFLU_RS30085	0.88	-0.3
6,694,149	+		PFLU_RS30085	0.88	+0.3
6,694,149	+		PFLU_RS30085	0.88	-1.3
6,694,149	+		PFLU_RS30085	0.88	+0.0
6,694,149	+		PFLU_RS30085	0.88	+0.1
6,694,149	+		PFLU_RS30085	0.88	+0.1
6,694,150	-		PFLU_RS30085	0.88	-1.2
6,694,311	+				+0.3
6,694,311	+				+0.3
6,694,311	+				+1.9
6,694,311	+				-0.1
6,694,311	+				+0.6
6,694,311	+				+1.2
6,694,312	-				-0.7
6,694,312	-				+0.4
6,694,312	-				+0.8
6,694,312	-				-0.3
6,694,389	+				-0.1
6,694,390	-				-0.7
6,694,533	+				+0.2
6,694,533	+				+0.1
6,694,533	+				-0.1
6,694,533	+				-0.9
6,694,534	-				+0.3
6,694,534	-				-0.8
6,694,535	+				-0.3
6,694,535	+				-2.0
6,694,535	+				+0.0
6,694,535	+				+1.4
6,694,536	-				-1.4
6,694,596	+				+1.1
6,694,596	+				+1.1
6,694,596	+				-1.5
6,694,596	+				+2.0
6,694,596	+				+0.2
6,694,597	-				+0.2
6,694,597	-				-0.5
6,694,677	+				-0.3
6,694,677	+				+0.2
6,694,677	+				+2.0
6,694,677	+				-1.0
6,694,677	+				+0.6
6,694,678	-				-0.0
6,694,678	-				-0.2
6,694,678	-				+0.1
6,694,678	-				-1.0
6,694,678	-				-1.0
6,694,678	-				-0.5
6,694,678	-				+3.2
6,694,678	-				-1.9
6,694,678	-				+0.2
6,694,710	+				-1.5
6,694,710	+				+0.1
6,694,711	-				-0.4
6,694,747	-				-1.1
6,694,794	+				+2.0
6,694,809	+				-1.0
6,694,809	+				+0.0
6,694,809	+				+0.7
6,694,809	+				-0.0
6,694,809	+				-1.0
6,694,809	+				+0.9
6,694,809	+				+1.4
6,694,809	+				+0.8
6,694,809	+				+1.0
6,694,810	-				-0.7
6,694,810	-				-1.1
6,694,810	-				+0.3
6,694,810	-				+0.8
6,694,810	-				+0.1
6,694,810	-				+1.8
6,694,840	+				-2.2
6,694,841	-				+1.4
6,694,867	-				+0.7
6,695,031	-				+0.2
6,695,031	-				+0.1
6,695,102	-		PFLU_RS30090	0.11	-0.4
6,695,155	+		PFLU_RS30090	0.13	+0.8
6,695,155	+		PFLU_RS30090	0.13	-1.9
6,695,155	+		PFLU_RS30090	0.13	-0.5
6,695,155	+		PFLU_RS30090	0.13	-1.7
6,695,155	+		PFLU_RS30090	0.13	+0.3
6,695,156	-		PFLU_RS30090	0.13	-0.7
6,695,156	-		PFLU_RS30090	0.13	-0.2
6,695,156	-		PFLU_RS30090	0.13	+0.9
6,695,156	-		PFLU_RS30090	0.13	+0.4
6,695,156	-		PFLU_RS30090	0.13	-0.7
6,695,288	-		PFLU_RS30090	0.19	+0.2
6,695,288	-		PFLU_RS30090	0.19	-0.6
6,695,288	-		PFLU_RS30090	0.19	+1.3
6,695,315	-		PFLU_RS30090	0.20	-0.3
6,695,315	-		PFLU_RS30090	0.20	-1.9
6,695,315	-		PFLU_RS30090	0.20	+0.1
6,695,370	+		PFLU_RS30090	0.23	+0.6
6,695,370	+		PFLU_RS30090	0.23	+1.3
6,695,370	+		PFLU_RS30090	0.23	-0.6
6,695,370	+		PFLU_RS30090	0.23	-2.1
6,695,370	+		PFLU_RS30090	0.23	-1.6
6,695,370	+		PFLU_RS30090	0.23	-0.0
6,695,370	+		PFLU_RS30090	0.23	-0.7
6,695,371	-		PFLU_RS30090	0.23	-1.5
6,695,371	-		PFLU_RS30090	0.23	+1.4
6,695,371	-		PFLU_RS30090	0.23	+0.5
6,695,371	-		PFLU_RS30090	0.23	-0.0
6,695,371	-		PFLU_RS30090	0.23	+0.5
6,695,374	+		PFLU_RS30090	0.23	+0.3
6,695,374	+		PFLU_RS30090	0.23	-1.9
6,695,375	-		PFLU_RS30090	0.23	-0.2
6,695,375	-		PFLU_RS30090	0.23	-1.0
6,695,375	-		PFLU_RS30090	0.23	+1.8
6,695,375	-		PFLU_RS30090	0.23	-0.5
6,695,375	-		PFLU_RS30090	0.23	+0.1
6,695,375	-		PFLU_RS30090	0.23	-1.4
6,695,375	-		PFLU_RS30090	0.23	-0.2
6,695,375	-		PFLU_RS30090	0.23	+1.3
6,695,518	+		PFLU_RS30090	0.29	+1.0
6,695,519	-		PFLU_RS30090	0.29	-0.4
6,695,721	+		PFLU_RS30090	0.38	+1.1
6,695,800	+		PFLU_RS30090	0.41	-0.2
6,695,801	-		PFLU_RS30090	0.41	-0.5
6,695,801	-		PFLU_RS30090	0.41	+0.7
6,695,804	+		PFLU_RS30090	0.42	-0.9
6,695,881	+		PFLU_RS30090	0.45	+0.5
6,695,916	+		PFLU_RS30090	0.46	+1.1
6,695,917	-		PFLU_RS30090	0.46	-0.9
6,695,917	-		PFLU_RS30090	0.46	-1.5
6,695,944	-		PFLU_RS30090	0.48	-1.0
6,695,953	+		PFLU_RS30090	0.48	+0.2
6,696,077	-		PFLU_RS30090	0.53	-0.3
6,696,146	+		PFLU_RS30090	0.56	+0.9
6,696,146	+		PFLU_RS30090	0.56	-1.1
6,696,187	+		PFLU_RS30090	0.58	+1.0
6,696,187	+		PFLU_RS30090	0.58	+0.3
6,696,187	+		PFLU_RS30090	0.58	-0.4
6,696,187	+		PFLU_RS30090	0.58	-0.3
6,696,187	+		PFLU_RS30090	0.58	-0.2
6,696,187	+		PFLU_RS30090	0.58	+1.7
6,696,187	+		PFLU_RS30090	0.58	-1.0
6,696,187	+		PFLU_RS30090	0.58	+0.4
6,696,187	+		PFLU_RS30090	0.58	+0.4
6,696,188	-		PFLU_RS30090	0.58	-0.5
6,696,188	-		PFLU_RS30090	0.58	-1.5
6,696,188	-		PFLU_RS30090	0.58	-1.5
6,696,188	-		PFLU_RS30090	0.58	+0.6
6,696,188	-		PFLU_RS30090	0.58	-1.0
6,696,188	-		PFLU_RS30090	0.58	+0.3
6,696,188	-		PFLU_RS30090	0.58	-0.9
6,696,188	-		PFLU_RS30090	0.58	-1.1
6,696,188	-		PFLU_RS30090	0.58	-0.2
6,696,229	+		PFLU_RS30090	0.60	+0.2
6,696,230	-		PFLU_RS30090	0.60	+0.5
6,696,230	-		PFLU_RS30090	0.60	+0.4
6,696,288	+		PFLU_RS30090	0.63	+0.6
6,696,288	+		PFLU_RS30090	0.63	+0.8
6,696,289	-		PFLU_RS30090	0.63	+1.7
6,696,289	-		PFLU_RS30090	0.63	+1.1
6,696,289	-		PFLU_RS30090	0.63	-0.4
6,696,289	-		PFLU_RS30090	0.63	+1.5
6,696,289	-		PFLU_RS30090	0.63	+0.4
6,696,418	+		PFLU_RS30090	0.68	-0.7
6,696,418	+		PFLU_RS30090	0.68	-2.7
6,696,418	+		PFLU_RS30090	0.68	+1.5
6,696,418	+		PFLU_RS30090	0.68	-0.7
6,696,418	+		PFLU_RS30090	0.68	-1.5
6,696,418	+		PFLU_RS30090	0.68	-0.1
6,696,418	+		PFLU_RS30090	0.68	-0.5
6,696,418	+		PFLU_RS30090	0.68	-0.9
6,696,419	-		PFLU_RS30090	0.68	+1.6
6,696,419	-		PFLU_RS30090	0.68	+0.3
6,696,419	-		PFLU_RS30090	0.68	-0.6
6,696,419	-		PFLU_RS30090	0.68	-2.0
6,696,419	-		PFLU_RS30090	0.68	-0.7
6,696,534	-		PFLU_RS30090	0.73	-0.4
6,696,649	+		PFLU_RS30090	0.78	-0.7
6,696,649	+		PFLU_RS30090	0.78	-1.4
6,696,649	+		PFLU_RS30090	0.78	-0.4
6,696,649	+		PFLU_RS30090	0.78	-0.7
6,696,649	+		PFLU_RS30090	0.78	+0.8
6,696,649	+		PFLU_RS30090	0.78	-0.6
6,696,650	-		PFLU_RS30090	0.78	-0.4
6,696,650	-		PFLU_RS30090	0.78	-0.3
6,696,650	-		PFLU_RS30090	0.78	+0.5
6,696,650	-		PFLU_RS30090	0.78	-0.9
6,696,650	-		PFLU_RS30090	0.78	+0.5
6,696,650	-		PFLU_RS30090	0.78	-0.0
6,696,650	-		PFLU_RS30090	0.78	+0.2
6,696,650	-		PFLU_RS30090	0.78	+1.2
6,696,650	-		PFLU_RS30090	0.78	-0.0
6,696,650	-		PFLU_RS30090	0.78	-0.9
6,696,650	-		PFLU_RS30090	0.78	-0.5
6,696,650	-		PFLU_RS30090	0.78	-2.6
6,696,751	+		PFLU_RS30090	0.83	-0.2
6,696,751	+		PFLU_RS30090	0.83	+2.1
6,696,751	+		PFLU_RS30090	0.83	+1.1
6,696,752	-		PFLU_RS30090	0.83	-0.1
6,696,752	-		PFLU_RS30090	0.83	-0.4
6,696,752	-		PFLU_RS30090	0.83	-0.1
6,696,752	-		PFLU_RS30090	0.83	-0.7
6,696,752	-		PFLU_RS30090	0.83	-0.4
6,696,752	-		PFLU_RS30090	0.83	-0.6
6,696,923	-				+1.4
6,696,923	-				-1.6
6,696,923	-				-0.2
6,696,923	-				+0.6
6,696,997	+				-1.0
6,696,997	+				-0.7
6,696,997	+				-1.0
6,696,997	+				+0.8
6,696,998	-				-0.7
6,696,998	-				+0.8
6,697,147	+				+0.4
6,697,147	+				-0.8
6,697,148	-				-0.9
6,697,153	+				+0.3
6,697,153	+				+0.6
6,697,153	+				+0.5
6,697,153	+				+0.6
6,697,153	+				+0.4
6,697,154	-				-0.4
6,697,154	-				-0.3
6,697,154	-				+1.6
6,697,154	-				+0.7
6,697,154	-				-0.2
6,697,180	+				-0.8
6,697,180	+				+1.1
6,697,180	+				-0.4
6,697,180	+				+1.0
6,697,180	+				-0.2
6,697,180	+				+0.4
6,697,180	+				-0.7
6,697,180	+				-0.1
6,697,181	-				+0.3
6,697,181	-				+0.0
6,697,181	-				-0.5
6,697,181	-				-0.2
6,697,181	-				-0.1
6,697,181	-				+0.2
6,697,181	-				+0.8
6,697,181	-				-0.2
6,697,181	-				-0.2
6,697,181	-				+0.4
6,697,181	-				+0.5
6,697,225	-		PFLU_RS30095	0.21	+0.8
6,697,225	-		PFLU_RS30095	0.21	+1.2
6,697,318	+		PFLU_RS30095	0.46	+0.8
6,697,318	+		PFLU_RS30095	0.46	-0.1
6,697,319	-		PFLU_RS30095	0.46	-1.9
6,697,319	-		PFLU_RS30095	0.46	-0.8
6,697,319	-		PFLU_RS30095	0.46	-0.6
6,697,390	+		PFLU_RS30095	0.65	-0.3
6,697,390	+		PFLU_RS30095	0.65	-0.3
6,697,390	+		PFLU_RS30095	0.65	+0.7
6,697,390	+		PFLU_RS30095	0.65	-0.5
6,697,390	+		PFLU_RS30095	0.65	+0.4
6,697,391	-		PFLU_RS30095	0.65	-0.3
6,697,391	-		PFLU_RS30095	0.65	-0.6
6,697,391	-		PFLU_RS30095	0.65	+0.4
6,697,423	+		PFLU_RS30095	0.73	+1.2
6,697,423	+		PFLU_RS30095	0.73	+0.3
6,697,424	-		PFLU_RS30095	0.74	+0.2
6,697,424	-		PFLU_RS30095	0.74	-0.5
6,697,449	+		PFLU_RS30095	0.80	+0.2
6,697,449	+		PFLU_RS30095	0.80	+0.0
6,697,449	+		PFLU_RS30095	0.80	+0.6
6,697,450	-		PFLU_RS30095	0.80	-1.3
6,697,450	-		PFLU_RS30095	0.80	+0.3
6,697,586	-				+0.2