Experiment: D-Glucose (C); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS25510 and PFLU_RS25515 are separated by 140 nucleotides PFLU_RS25515 and PFLU_RS25520 overlap by 4 nucleotides PFLU_RS25520 and PFLU_RS25525 are separated by 240 nucleotides PFLU_RS25525 and PFLU_RS25530 are separated by 162 nucleotides
PFLU_RS25510: PFLU_RS25510 - amino acid permease, at 5,693,518 to 5,694,921
_RS25510
PFLU_RS25515: PFLU_RS25515 - tryptophan 2,3-dioxygenase, at 5,695,062 to 5,695,919
_RS25515
PFLU_RS25520: PFLU_RS25520 - arylformamidase, at 5,695,916 to 5,696,566
_RS25520
PFLU_RS25525: PFLU_RS25525 - cupin domain-containing protein, at 5,696,807 to 5,697,151
_RS25525
PFLU_RS25530: PFLU_RS25530 - hypothetical protein, at 5,697,314 to 5,698,063
_RS25530
Position (kb) 5695
5696
5697 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5695.064 kb on - strand at 5695.077 kb on + strand at 5695.077 kb on + strand at 5695.087 kb on - strand at 5695.087 kb on - strand at 5695.087 kb on - strand at 5695.106 kb on + strand at 5695.126 kb on + strand at 5695.126 kb on + strand at 5695.126 kb on + strand at 5695.142 kb on + strand at 5695.252 kb on + strand, within PFLU_RS25515 at 5695.252 kb on + strand, within PFLU_RS25515 at 5695.253 kb on - strand, within PFLU_RS25515 at 5695.253 kb on - strand, within PFLU_RS25515 at 5695.282 kb on + strand, within PFLU_RS25515 at 5695.282 kb on + strand, within PFLU_RS25515 at 5695.283 kb on - strand, within PFLU_RS25515 at 5695.283 kb on - strand, within PFLU_RS25515 at 5695.283 kb on - strand, within PFLU_RS25515 at 5695.283 kb on - strand, within PFLU_RS25515 at 5695.283 kb on - strand, within PFLU_RS25515 at 5695.283 kb on - strand, within PFLU_RS25515 at 5695.405 kb on + strand, within PFLU_RS25515 at 5695.406 kb on - strand, within PFLU_RS25515 at 5695.502 kb on + strand, within PFLU_RS25515 at 5695.502 kb on + strand, within PFLU_RS25515 at 5695.573 kb on + strand, within PFLU_RS25515 at 5695.573 kb on + strand, within PFLU_RS25515 at 5695.573 kb on + strand, within PFLU_RS25515 at 5695.573 kb on + strand, within PFLU_RS25515 at 5695.574 kb on - strand, within PFLU_RS25515 at 5695.574 kb on - strand, within PFLU_RS25515 at 5695.574 kb on - strand, within PFLU_RS25515 at 5695.683 kb on + strand, within PFLU_RS25515 at 5695.683 kb on + strand, within PFLU_RS25515 at 5695.684 kb on - strand, within PFLU_RS25515 at 5695.684 kb on - strand, within PFLU_RS25515 at 5695.684 kb on - strand, within PFLU_RS25515 at 5695.684 kb on - strand, within PFLU_RS25515 at 5695.826 kb on - strand, within PFLU_RS25515 at 5695.826 kb on - strand, within PFLU_RS25515 at 5695.834 kb on + strand at 5695.834 kb on + strand at 5695.834 kb on + strand at 5695.834 kb on + strand at 5695.835 kb on - strand at 5696.007 kb on + strand, within PFLU_RS25520 at 5696.008 kb on - strand, within PFLU_RS25520 at 5696.021 kb on + strand, within PFLU_RS25520 at 5696.022 kb on - strand, within PFLU_RS25520 at 5696.122 kb on + strand, within PFLU_RS25520 at 5696.123 kb on - strand, within PFLU_RS25520 at 5696.123 kb on - strand, within PFLU_RS25520 at 5696.226 kb on + strand, within PFLU_RS25520 at 5696.226 kb on + strand, within PFLU_RS25520 at 5696.226 kb on + strand, within PFLU_RS25520 at 5696.226 kb on + strand, within PFLU_RS25520 at 5696.227 kb on - strand, within PFLU_RS25520 at 5696.227 kb on - strand, within PFLU_RS25520 at 5696.227 kb on - strand, within PFLU_RS25520 at 5696.337 kb on + strand, within PFLU_RS25520 at 5696.337 kb on + strand, within PFLU_RS25520 at 5696.337 kb on + strand, within PFLU_RS25520 at 5696.337 kb on + strand, within PFLU_RS25520 at 5696.337 kb on + strand, within PFLU_RS25520 at 5696.337 kb on + strand, within PFLU_RS25520 at 5696.337 kb on + strand, within PFLU_RS25520 at 5696.337 kb on + strand, within PFLU_RS25520 at 5696.337 kb on + strand, within PFLU_RS25520 at 5696.337 kb on + strand, within PFLU_RS25520 at 5696.337 kb on + strand, within PFLU_RS25520 at 5696.337 kb on + strand, within PFLU_RS25520 at 5696.337 kb on + strand, within PFLU_RS25520 at 5696.337 kb on + strand, within PFLU_RS25520 at 5696.337 kb on + strand, within PFLU_RS25520 at 5696.337 kb on + strand, within PFLU_RS25520 at 5696.338 kb on - strand, within PFLU_RS25520 at 5696.338 kb on - strand, within PFLU_RS25520 at 5696.338 kb on - strand, within PFLU_RS25520 at 5696.338 kb on - strand, within PFLU_RS25520 at 5696.338 kb on - strand, within PFLU_RS25520 at 5696.338 kb on - strand, within PFLU_RS25520 at 5696.338 kb on - strand, within PFLU_RS25520 at 5696.338 kb on - strand, within PFLU_RS25520 at 5696.338 kb on - strand, within PFLU_RS25520 at 5696.338 kb on - strand, within PFLU_RS25520 at 5696.338 kb on - strand, within PFLU_RS25520 at 5696.382 kb on + strand, within PFLU_RS25520 at 5696.382 kb on + strand, within PFLU_RS25520 at 5696.383 kb on - strand, within PFLU_RS25520 at 5696.383 kb on - strand, within PFLU_RS25520 at 5696.522 kb on - strand at 5696.522 kb on - strand at 5696.600 kb on + strand at 5696.600 kb on + strand at 5696.601 kb on - strand at 5696.601 kb on - strand at 5696.601 kb on - strand at 5696.662 kb on + strand at 5696.663 kb on - strand at 5696.663 kb on - strand at 5696.675 kb on + strand at 5696.694 kb on + strand at 5696.694 kb on + strand at 5696.694 kb on + strand at 5696.694 kb on + strand at 5696.694 kb on + strand at 5696.694 kb on + strand at 5696.695 kb on - strand at 5696.695 kb on - strand at 5696.695 kb on - strand at 5696.695 kb on - strand at 5696.695 kb on - strand at 5696.696 kb on + strand at 5696.696 kb on + strand at 5696.697 kb on - strand at 5696.697 kb on - strand at 5696.697 kb on - strand at 5696.697 kb on - strand at 5696.697 kb on - strand at 5696.697 kb on - strand at 5696.697 kb on - strand at 5696.703 kb on + strand at 5696.703 kb on + strand at 5696.704 kb on - strand at 5696.707 kb on + strand at 5696.708 kb on - strand at 5696.770 kb on + strand at 5696.771 kb on - strand at 5696.915 kb on + strand, within PFLU_RS25525 at 5696.916 kb on - strand, within PFLU_RS25525 at 5696.916 kb on - strand, within PFLU_RS25525 at 5696.975 kb on + strand, within PFLU_RS25525 at 5696.975 kb on + strand, within PFLU_RS25525 at 5696.975 kb on + strand, within PFLU_RS25525 at 5696.976 kb on - strand, within PFLU_RS25525 at 5696.976 kb on - strand, within PFLU_RS25525 at 5696.976 kb on - strand, within PFLU_RS25525 at 5696.976 kb on - strand, within PFLU_RS25525 at 5696.976 kb on - strand, within PFLU_RS25525 at 5696.985 kb on - strand, within PFLU_RS25525 at 5696.985 kb on - strand, within PFLU_RS25525 at 5696.985 kb on - strand, within PFLU_RS25525 at 5696.999 kb on + strand, within PFLU_RS25525 at 5697.000 kb on - strand, within PFLU_RS25525 at 5697.000 kb on - strand, within PFLU_RS25525 at 5697.000 kb on - strand, within PFLU_RS25525 at 5697.020 kb on + strand, within PFLU_RS25525 at 5697.021 kb on - strand, within PFLU_RS25525 at 5697.073 kb on + strand, within PFLU_RS25525 at 5697.130 kb on + strand at 5697.130 kb on + strand at 5697.130 kb on + strand at 5697.130 kb on + strand at 5697.130 kb on + strand at 5697.130 kb on + strand at 5697.130 kb on + strand at 5697.131 kb on - strand at 5697.131 kb on - strand at 5697.134 kb on + strand at 5697.135 kb on - strand at 5697.157 kb on + strand at 5697.201 kb on + strand at 5697.221 kb on + strand at 5697.221 kb on + strand at 5697.221 kb on + strand at 5697.221 kb on + strand at 5697.221 kb on + strand at 5697.221 kb on + strand at 5697.222 kb on - strand at 5697.222 kb on - strand at 5697.224 kb on + strand at 5697.224 kb on + strand at 5697.224 kb on + strand at 5697.224 kb on + strand at 5697.224 kb on + strand at 5697.224 kb on + strand at 5697.224 kb on + strand at 5697.224 kb on + strand at 5697.224 kb on + strand at 5697.225 kb on - strand at 5697.225 kb on - strand at 5697.225 kb on - strand at 5697.225 kb on - strand at 5697.225 kb on - strand at 5697.225 kb on - strand at 5697.225 kb on - strand at 5697.236 kb on + strand at 5697.237 kb on - strand at 5697.310 kb on - strand at 5697.310 kb on - strand at 5697.461 kb on - strand, within PFLU_RS25530 at 5697.498 kb on + strand, within PFLU_RS25530 at 5697.498 kb on + strand, within PFLU_RS25530 at 5697.546 kb on - strand, within PFLU_RS25530
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); with MOPS remove 5,695,064 - -0.2 5,695,077 + -1.5 5,695,077 + -0.8 5,695,087 - +0.5 5,695,087 - +0.7 5,695,087 - -0.1 5,695,106 + -0.7 5,695,126 + +0.2 5,695,126 + -0.3 5,695,126 + +0.8 5,695,142 + -0.6 5,695,252 + PFLU_RS25515 0.22 -0.0 5,695,252 + PFLU_RS25515 0.22 +0.9 5,695,253 - PFLU_RS25515 0.22 +0.5 5,695,253 - PFLU_RS25515 0.22 +0.9 5,695,282 + PFLU_RS25515 0.26 +0.9 5,695,282 + PFLU_RS25515 0.26 -0.5 5,695,283 - PFLU_RS25515 0.26 +0.5 5,695,283 - PFLU_RS25515 0.26 -0.9 5,695,283 - PFLU_RS25515 0.26 -0.5 5,695,283 - PFLU_RS25515 0.26 +0.3 5,695,283 - PFLU_RS25515 0.26 +1.2 5,695,283 - PFLU_RS25515 0.26 -0.8 5,695,405 + PFLU_RS25515 0.40 +0.6 5,695,406 - PFLU_RS25515 0.40 +1.5 5,695,502 + PFLU_RS25515 0.51 -0.3 5,695,502 + PFLU_RS25515 0.51 -0.1 5,695,573 + PFLU_RS25515 0.60 -0.6 5,695,573 + PFLU_RS25515 0.60 +0.8 5,695,573 + PFLU_RS25515 0.60 +0.0 5,695,573 + PFLU_RS25515 0.60 -0.2 5,695,574 - PFLU_RS25515 0.60 +1.7 5,695,574 - PFLU_RS25515 0.60 -0.9 5,695,574 - PFLU_RS25515 0.60 +0.9 5,695,683 + PFLU_RS25515 0.72 +0.2 5,695,683 + PFLU_RS25515 0.72 +0.1 5,695,684 - PFLU_RS25515 0.72 +0.5 5,695,684 - PFLU_RS25515 0.72 +2.0 5,695,684 - PFLU_RS25515 0.72 -1.5 5,695,684 - PFLU_RS25515 0.72 +0.6 5,695,826 - PFLU_RS25515 0.89 -0.1 5,695,826 - PFLU_RS25515 0.89 +0.0 5,695,834 + -0.8 5,695,834 + +0.8 5,695,834 + +0.3 5,695,834 + +0.6 5,695,835 - -0.7 5,696,007 + PFLU_RS25520 0.14 +0.1 5,696,008 - PFLU_RS25520 0.14 +1.6 5,696,021 + PFLU_RS25520 0.16 +1.2 5,696,022 - PFLU_RS25520 0.16 -1.4 5,696,122 + PFLU_RS25520 0.32 -0.1 5,696,123 - PFLU_RS25520 0.32 +0.3 5,696,123 - PFLU_RS25520 0.32 -1.1 5,696,226 + PFLU_RS25520 0.48 +0.2 5,696,226 + PFLU_RS25520 0.48 -0.1 5,696,226 + PFLU_RS25520 0.48 +1.1 5,696,226 + PFLU_RS25520 0.48 -0.6 5,696,227 - PFLU_RS25520 0.48 +0.1 5,696,227 - PFLU_RS25520 0.48 -1.4 5,696,227 - PFLU_RS25520 0.48 +0.2 5,696,337 + PFLU_RS25520 0.65 +0.3 5,696,337 + PFLU_RS25520 0.65 +0.5 5,696,337 + PFLU_RS25520 0.65 -0.2 5,696,337 + PFLU_RS25520 0.65 +0.3 5,696,337 + PFLU_RS25520 0.65 +0.9 5,696,337 + PFLU_RS25520 0.65 -1.0 5,696,337 + PFLU_RS25520 0.65 +1.1 5,696,337 + PFLU_RS25520 0.65 +1.2 5,696,337 + PFLU_RS25520 0.65 -1.6 5,696,337 + PFLU_RS25520 0.65 -0.5 5,696,337 + PFLU_RS25520 0.65 -2.7 5,696,337 + PFLU_RS25520 0.65 +0.5 5,696,337 + PFLU_RS25520 0.65 +1.2 5,696,337 + PFLU_RS25520 0.65 +0.6 5,696,337 + PFLU_RS25520 0.65 -0.3 5,696,337 + PFLU_RS25520 0.65 -0.7 5,696,338 - PFLU_RS25520 0.65 +2.0 5,696,338 - PFLU_RS25520 0.65 -1.2 5,696,338 - PFLU_RS25520 0.65 +0.3 5,696,338 - PFLU_RS25520 0.65 +0.1 5,696,338 - PFLU_RS25520 0.65 +1.2 5,696,338 - PFLU_RS25520 0.65 -0.7 5,696,338 - PFLU_RS25520 0.65 -0.5 5,696,338 - PFLU_RS25520 0.65 +0.5 5,696,338 - PFLU_RS25520 0.65 -1.5 5,696,338 - PFLU_RS25520 0.65 -0.1 5,696,338 - PFLU_RS25520 0.65 -2.3 5,696,382 + PFLU_RS25520 0.72 +0.3 5,696,382 + PFLU_RS25520 0.72 -0.4 5,696,383 - PFLU_RS25520 0.72 -1.6 5,696,383 - PFLU_RS25520 0.72 +0.6 5,696,522 - +0.9 5,696,522 - +0.4 5,696,600 + +0.1 5,696,600 + +0.3 5,696,601 - +1.1 5,696,601 - -0.8 5,696,601 - -1.6 5,696,662 + +0.7 5,696,663 - +0.5 5,696,663 - -0.1 5,696,675 + +0.6 5,696,694 + -0.4 5,696,694 + +1.3 5,696,694 + -1.3 5,696,694 + -0.5 5,696,694 + +1.0 5,696,694 + +0.1 5,696,695 - +0.7 5,696,695 - -0.6 5,696,695 - +1.2 5,696,695 - -1.8 5,696,695 - +0.4 5,696,696 + +0.0 5,696,696 + +2.0 5,696,697 - +0.3 5,696,697 - -1.4 5,696,697 - +0.3 5,696,697 - +0.4 5,696,697 - -0.0 5,696,697 - -0.5 5,696,697 - -1.0 5,696,703 + +0.4 5,696,703 + -0.5 5,696,704 - +0.7 5,696,707 + +0.0 5,696,708 - +0.7 5,696,770 + +0.1 5,696,771 - +1.8 5,696,915 + PFLU_RS25525 0.31 +0.9 5,696,916 - PFLU_RS25525 0.32 +0.6 5,696,916 - PFLU_RS25525 0.32 +0.6 5,696,975 + PFLU_RS25525 0.49 +0.2 5,696,975 + PFLU_RS25525 0.49 -1.3 5,696,975 + PFLU_RS25525 0.49 -0.9 5,696,976 - PFLU_RS25525 0.49 +2.0 5,696,976 - PFLU_RS25525 0.49 -0.9 5,696,976 - PFLU_RS25525 0.49 -1.1 5,696,976 - PFLU_RS25525 0.49 -1.7 5,696,976 - PFLU_RS25525 0.49 -0.2 5,696,985 - PFLU_RS25525 0.52 +0.5 5,696,985 - PFLU_RS25525 0.52 +0.9 5,696,985 - PFLU_RS25525 0.52 -0.3 5,696,999 + PFLU_RS25525 0.56 -0.1 5,697,000 - PFLU_RS25525 0.56 -0.7 5,697,000 - PFLU_RS25525 0.56 -1.3 5,697,000 - PFLU_RS25525 0.56 -1.1 5,697,020 + PFLU_RS25525 0.62 +1.9 5,697,021 - PFLU_RS25525 0.62 +0.5 5,697,073 + PFLU_RS25525 0.77 +0.7 5,697,130 + -0.2 5,697,130 + -1.0 5,697,130 + -0.2 5,697,130 + -0.5 5,697,130 + +0.2 5,697,130 + -0.1 5,697,130 + -0.1 5,697,131 - -1.1 5,697,131 - +0.3 5,697,134 + -1.1 5,697,135 - +0.9 5,697,157 + -1.5 5,697,201 + +1.0 5,697,221 + -0.2 5,697,221 + +0.2 5,697,221 + +0.8 5,697,221 + +0.2 5,697,221 + +1.0 5,697,221 + +0.8 5,697,222 - -1.8 5,697,222 - -1.2 5,697,224 + -0.3 5,697,224 + +1.8 5,697,224 + +0.6 5,697,224 + -0.1 5,697,224 + -0.0 5,697,224 + +0.1 5,697,224 + -0.4 5,697,224 + -1.1 5,697,224 + -0.4 5,697,225 - -3.0 5,697,225 - +0.1 5,697,225 - +0.2 5,697,225 - -0.6 5,697,225 - -1.8 5,697,225 - +1.0 5,697,225 - +0.3 5,697,236 + +0.7 5,697,237 - +0.3 5,697,310 - -0.6 5,697,310 - -0.5 5,697,461 - PFLU_RS25530 0.20 -0.4 5,697,498 + PFLU_RS25530 0.25 -0.5 5,697,498 + PFLU_RS25530 0.25 +2.0 5,697,546 - PFLU_RS25530 0.31 -1.5
Or see this region's nucleotide sequence