Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS24235

Experiment: D-Glucose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C); with MOPS
5,424,956	-		PFLU_RS24230	0.17	+0.4
5,424,999	+		PFLU_RS24230	0.20	+0.1
5,424,999	+		PFLU_RS24230	0.20	+0.2
5,424,999	+		PFLU_RS24230	0.20	-0.2
5,424,999	+		PFLU_RS24230	0.20	-3.7
5,425,000	-		PFLU_RS24230	0.20	+0.6
5,425,000	-		PFLU_RS24230	0.20	+0.2
5,425,000	-		PFLU_RS24230	0.20	-0.5
5,425,000	-		PFLU_RS24230	0.20	+1.1
5,425,000	-		PFLU_RS24230	0.20	-0.6
5,425,000	-		PFLU_RS24230	0.20	-1.1
5,425,000	-		PFLU_RS24230	0.20	-1.4
5,425,002	+		PFLU_RS24230	0.21	+1.0
5,425,002	+		PFLU_RS24230	0.21	-2.0
5,425,002	+		PFLU_RS24230	0.21	+0.5
5,425,002	+		PFLU_RS24230	0.21	-0.9
5,425,002	+		PFLU_RS24230	0.21	+0.2
5,425,003	-		PFLU_RS24230	0.21	-0.3
5,425,003	-		PFLU_RS24230	0.21	-0.2
5,425,021	+		PFLU_RS24230	0.22	+0.8
5,425,021	+		PFLU_RS24230	0.22	+0.1
5,425,021	+		PFLU_RS24230	0.22	-0.4
5,425,022	-		PFLU_RS24230	0.22	-1.1
5,425,022	-		PFLU_RS24230	0.22	+0.1
5,425,022	-		PFLU_RS24230	0.22	-0.9
5,425,084	-		PFLU_RS24230	0.28	+0.2
5,425,214	-		PFLU_RS24230	0.39	+0.4
5,425,244	+		PFLU_RS24230	0.41	-0.6
5,425,244	+		PFLU_RS24230	0.41	-1.1
5,425,244	+		PFLU_RS24230	0.41	-0.9
5,425,244	+		PFLU_RS24230	0.41	+0.4
5,425,245	-		PFLU_RS24230	0.41	+0.7
5,425,245	-		PFLU_RS24230	0.41	-0.5
5,425,271	+		PFLU_RS24230	0.44	-0.3
5,425,271	+		PFLU_RS24230	0.44	-0.6
5,425,271	+		PFLU_RS24230	0.44	+0.1
5,425,272	-		PFLU_RS24230	0.44	+0.2
5,425,272	-		PFLU_RS24230	0.44	-0.6
5,425,272	-		PFLU_RS24230	0.44	+0.6
5,425,336	+		PFLU_RS24230	0.49	-0.6
5,425,428	+		PFLU_RS24230	0.57	-0.0
5,425,428	+		PFLU_RS24230	0.57	-0.1
5,425,428	+		PFLU_RS24230	0.57	-0.9
5,425,428	+		PFLU_RS24230	0.57	+2.2
5,425,428	+		PFLU_RS24230	0.57	-1.2
5,425,429	-		PFLU_RS24230	0.57	-0.4
5,425,429	-		PFLU_RS24230	0.57	+0.4
5,425,429	-		PFLU_RS24230	0.57	+0.3
5,425,429	-		PFLU_RS24230	0.57	+1.0
5,425,429	-		PFLU_RS24230	0.57	+0.2
5,425,429	-		PFLU_RS24230	0.57	+0.3
5,425,429	-		PFLU_RS24230	0.57	-0.6
5,425,442	-		PFLU_RS24230	0.58	+0.4
5,425,460	+		PFLU_RS24230	0.60	-2.0
5,425,524	+		PFLU_RS24230	0.65	+1.0
5,425,524	+		PFLU_RS24230	0.65	-0.0
5,425,524	+		PFLU_RS24230	0.65	-0.4
5,425,524	+		PFLU_RS24230	0.65	+0.1
5,425,530	+		PFLU_RS24230	0.66	+2.4
5,425,530	+		PFLU_RS24230	0.66	+0.0
5,425,535	+		PFLU_RS24230	0.66	+0.3
5,425,535	+		PFLU_RS24230	0.66	-0.6
5,425,535	+		PFLU_RS24230	0.66	-2.2
5,425,536	-		PFLU_RS24230	0.66	-0.1
5,425,536	-		PFLU_RS24230	0.66	+0.3
5,425,719	+		PFLU_RS24230	0.82	-2.1
5,425,720	-		PFLU_RS24230	0.82	-0.3
5,426,012	+				+0.5
5,426,013	-				-1.4
5,426,013	-				+1.1
5,426,013	-				+0.9
5,426,013	-				-0.2
5,426,013	-				+0.2
5,426,013	-				-0.0
5,426,013	-				-1.8
5,426,126	+		PFLU_RS24235	0.20	+0.7
5,426,127	-		PFLU_RS24235	0.20	+0.6
5,426,246	+		PFLU_RS24235	0.32	+0.4
5,426,246	+		PFLU_RS24235	0.32	+0.8
5,426,247	-		PFLU_RS24235	0.32	+0.4
5,426,396	+		PFLU_RS24235	0.47	+0.9
5,426,397	-		PFLU_RS24235	0.47	+0.9
5,426,434	+		PFLU_RS24235	0.51	+0.4
5,426,434	+		PFLU_RS24235	0.51	-0.5
5,426,435	-		PFLU_RS24235	0.51	-2.5
5,426,435	-		PFLU_RS24235	0.51	-0.5
5,426,488	+		PFLU_RS24235	0.56	-0.4
5,426,561	+		PFLU_RS24235	0.64	+0.4
5,426,561	+		PFLU_RS24235	0.64	-0.0
5,426,561	+		PFLU_RS24235	0.64	-0.1
5,426,561	+		PFLU_RS24235	0.64	-0.9
5,426,561	+		PFLU_RS24235	0.64	+1.7
5,426,561	+		PFLU_RS24235	0.64	-0.6
5,426,561	+		PFLU_RS24235	0.64	-0.6
5,426,562	-		PFLU_RS24235	0.64	-1.5
5,426,562	-		PFLU_RS24235	0.64	-1.0
5,426,562	-		PFLU_RS24235	0.64	+1.9
5,426,562	-		PFLU_RS24235	0.64	+0.6
5,426,562	-		PFLU_RS24235	0.64	-1.7
5,426,562	-		PFLU_RS24235	0.64	-0.4
5,426,562	-		PFLU_RS24235	0.64	+0.0
5,426,562	-		PFLU_RS24235	0.64	+0.8
5,426,735	+		PFLU_RS24235	0.81	-1.9
5,426,816	+		PFLU_RS24235	0.89	-0.1
5,426,816	+		PFLU_RS24235	0.89	+0.6
5,426,853	+				+0.4
5,426,854	-				+0.8
5,426,855	+				-1.9
5,426,855	+				+0.2
5,426,855	+				+0.1
5,426,855	+				-2.7
5,426,855	+				-0.4
5,426,855	+				-0.9
5,426,855	+				+0.0
5,426,855	+				+0.7
5,426,855	+				+1.5
5,426,855	+				-0.1
5,426,855	+				-0.8
5,426,855	+				-0.6
5,426,855	+				+0.3
5,426,855	+				-1.1
5,426,855	+				-1.5
5,426,855	+				-0.3
5,426,855	+				-0.4
5,426,855	+				+1.4
5,426,855	+				-0.3
5,426,855	+				+0.1
5,426,855	+				+0.7
5,426,855	+				+0.5
5,426,855	+				-0.9
5,426,855	+				+0.1
5,426,855	+				+0.3
5,426,855	+				+0.0
5,426,855	+				+0.3
5,426,855	+				-0.9
5,426,855	+				+0.8
5,426,856	-				+1.3
5,426,856	-				-0.0
5,426,856	-				+0.4
5,426,856	-				+0.5
5,426,856	-				+0.8
5,426,856	-				+1.0
5,426,856	-				+0.8
5,426,856	-				-0.1
5,426,856	-				-2.6
5,426,856	-				+1.1
5,426,856	-				-0.2
5,426,856	-				+0.1
5,426,856	-				-0.1
5,426,856	-				+0.2
5,426,856	-				-1.6
5,426,856	-				-1.1
5,426,856	-				+0.3
5,426,856	-				+0.3
5,426,856	-				-0.4
5,426,856	-				-0.7
5,426,856	-				-0.5
5,426,856	-				-0.3
5,426,856	-				-0.4
5,426,856	-				-0.3
5,426,856	-				-0.8
5,426,856	-				-1.3
5,426,856	-				-0.1
5,426,856	-				+0.7
5,426,856	-				-0.4
5,426,856	-				+0.4
5,426,967	+				-0.2
5,427,123	+		PFLU_RS24240	0.14	-0.6
5,427,171	+		PFLU_RS24240	0.18	-0.8
5,427,171	+		PFLU_RS24240	0.18	-0.8
5,427,172	-		PFLU_RS24240	0.18	-0.5
5,427,219	+		PFLU_RS24240	0.22	+0.0
5,427,220	-		PFLU_RS24240	0.22	-0.4
5,427,270	+		PFLU_RS24240	0.26	+0.6
5,427,270	+		PFLU_RS24240	0.26	-0.9
5,427,400	+		PFLU_RS24240	0.35	+0.5
5,427,428	+		PFLU_RS24240	0.37	-1.8
5,427,449	+		PFLU_RS24240	0.39	-0.9
5,427,450	-		PFLU_RS24240	0.39	-1.3
5,427,626	+		PFLU_RS24240	0.52	+0.8
5,427,626	+		PFLU_RS24240	0.52	-0.3
5,427,627	-		PFLU_RS24240	0.52	+0.6
5,427,746	+		PFLU_RS24240	0.61	-0.3
5,427,746	+		PFLU_RS24240	0.61	+1.0
5,427,746	+		PFLU_RS24240	0.61	+0.7
5,427,746	+		PFLU_RS24240	0.61	-0.9
5,427,746	+		PFLU_RS24240	0.61	+0.7
5,427,746	+		PFLU_RS24240	0.61	-0.7
5,427,746	+		PFLU_RS24240	0.61	+0.4
5,427,746	+		PFLU_RS24240	0.61	-0.3
5,427,746	+		PFLU_RS24240	0.61	-0.2
5,427,746	+		PFLU_RS24240	0.61	-0.9
5,427,746	+		PFLU_RS24240	0.61	+1.1
5,427,746	+		PFLU_RS24240	0.61	+0.0
5,427,746	+		PFLU_RS24240	0.61	+1.5
5,427,746	+		PFLU_RS24240	0.61	+0.1
5,427,747	-		PFLU_RS24240	0.61	+0.2
5,427,747	-		PFLU_RS24240	0.61	+0.7
5,427,747	-		PFLU_RS24240	0.61	+0.5
5,427,747	-		PFLU_RS24240	0.61	-1.2
5,427,747	-		PFLU_RS24240	0.61	+1.5
5,427,747	-		PFLU_RS24240	0.61	-0.7
5,427,747	-		PFLU_RS24240	0.61	+0.4
5,427,747	-		PFLU_RS24240	0.61	+0.2
5,427,747	-		PFLU_RS24240	0.61	-0.2
5,427,747	-		PFLU_RS24240	0.61	-0.5
5,427,747	-		PFLU_RS24240	0.61	-0.9
5,427,747	-		PFLU_RS24240	0.61	+0.4
5,427,747	-		PFLU_RS24240	0.61	+0.0
5,427,747	-		PFLU_RS24240	0.61	+1.9
5,427,747	-		PFLU_RS24240	0.61	+0.6
5,427,810	-		PFLU_RS24240	0.66	-0.3
5,427,861	+		PFLU_RS24240	0.70	-0.1
5,427,863	+		PFLU_RS24240	0.70	-1.6
5,427,863	+		PFLU_RS24240	0.70	-0.3
5,427,863	+		PFLU_RS24240	0.70	+0.9
5,427,863	+		PFLU_RS24240	0.70	-0.1
5,427,863	+		PFLU_RS24240	0.70	+0.3
5,427,864	-		PFLU_RS24240	0.70	+0.6
5,427,864	-		PFLU_RS24240	0.70	+0.8
5,427,864	-		PFLU_RS24240	0.70	-1.2
5,427,864	-		PFLU_RS24240	0.70	-1.2
5,427,864	-		PFLU_RS24240	0.70	-1.4
5,427,864	-		PFLU_RS24240	0.70	-0.5
5,427,897	-		PFLU_RS24240	0.73	+0.3