Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS20235

Experiment: D-Glucose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C); with MOPS
4,578,515	+		PFLU_RS30975	0.76	+0.6
4,578,686	+		PFLU_RS30975	0.85	+2.0
4,578,737	-		PFLU_RS30975	0.88	+0.9
4,578,795	-				-1.9
4,578,863	-				-1.0
4,578,871	-				-1.7
4,578,908	+				+0.3
4,578,973	-				+1.1
4,578,973	-				+1.0
4,578,973	-				-0.1
4,578,985	+				+1.2
4,578,985	+				-0.0
4,578,985	+				+0.5
4,578,986	-				-2.1
4,578,990	-				-0.8
4,579,001	+				-0.2
4,579,001	+				-0.7
4,579,010	+				-0.9
4,579,052	-				-0.9
4,579,057	+				+0.7
4,579,057	+				+1.3
4,579,057	+				-2.8
4,579,058	-				-0.6
4,579,058	-				-0.3
4,579,058	-				+0.4
4,579,058	-				+0.8
4,579,058	-				-0.9
4,579,058	-				+0.9
4,579,059	+				-1.9
4,579,059	+				-0.3
4,579,059	+				-0.0
4,579,059	+				+0.2
4,579,059	+				+0.1
4,579,059	+				-0.1
4,579,084	-				+0.7
4,579,108	+				+0.3
4,579,108	+				-0.1
4,579,108	+				-0.2
4,579,108	+				+0.1
4,579,110	+				-0.2
4,579,110	+				+0.4
4,579,111	-				+0.2
4,579,111	-				-1.1
4,579,120	+				+0.6
4,579,120	+				-0.2
4,579,121	-				+1.5
4,579,153	+				-0.4
4,579,153	+				-1.1
4,579,153	+				+0.7
4,579,153	+				-0.4
4,579,154	-				-1.2
4,579,154	-				-1.7
4,579,154	-				+0.9
4,579,251	-		PFLU_RS20235	0.29	+0.9
4,579,251	-		PFLU_RS20235	0.29	-0.1
4,579,284	+		PFLU_RS20235	0.38	-2.6
4,579,284	+		PFLU_RS20235	0.38	+0.1
4,579,284	+		PFLU_RS20235	0.38	+0.9
4,579,285	-		PFLU_RS20235	0.39	-0.0
4,579,285	-		PFLU_RS20235	0.39	-0.4
4,579,285	-		PFLU_RS20235	0.39	+0.1
4,579,307	+		PFLU_RS20235	0.45	+0.8
4,579,307	+		PFLU_RS20235	0.45	+0.5
4,579,307	+		PFLU_RS20235	0.45	+0.0
4,579,307	+		PFLU_RS20235	0.45	+0.7
4,579,307	+		PFLU_RS20235	0.45	+0.4
4,579,307	+		PFLU_RS20235	0.45	+0.8
4,579,307	+		PFLU_RS20235	0.45	-1.1
4,579,307	+		PFLU_RS20235	0.45	-0.3
4,579,308	-		PFLU_RS20235	0.45	-0.9
4,579,308	-		PFLU_RS20235	0.45	-2.4
4,579,308	-		PFLU_RS20235	0.45	+0.3
4,579,308	-		PFLU_RS20235	0.45	-0.2
4,579,308	-		PFLU_RS20235	0.45	-0.8
4,579,308	-		PFLU_RS20235	0.45	-0.7
4,579,308	-		PFLU_RS20235	0.45	+2.3
4,579,308	-		PFLU_RS20235	0.45	-0.6
4,579,308	-		PFLU_RS20235	0.45	-1.0
4,579,311	+		PFLU_RS20235	0.46	+1.4
4,579,311	+		PFLU_RS20235	0.46	+0.6
4,579,312	-		PFLU_RS20235	0.46	+0.5
4,579,321	-		PFLU_RS20235	0.49	+0.2
4,579,362	+		PFLU_RS20235	0.61	-0.5
4,579,362	+		PFLU_RS20235	0.61	+0.4
4,579,362	+		PFLU_RS20235	0.61	-0.4
4,579,362	+		PFLU_RS20235	0.61	-0.2
4,579,363	-		PFLU_RS20235	0.61	+0.8
4,579,476	+				-2.6
4,579,477	-				+1.4
4,579,478	+				+0.3
4,579,478	+				-1.2
4,579,478	+				-1.0
4,579,478	+				+0.2
4,579,479	-				+0.2
4,579,479	-				-1.7
4,579,486	+				-0.2
4,579,487	-				+0.0
4,579,496	+				-0.5
4,579,496	+				-1.4
4,579,497	-				+0.3
4,579,497	-				-0.4
4,579,528	+				-0.9
4,579,585	+				-1.1
4,579,585	+				-0.6
4,579,594	+				-0.0
4,579,594	+				+0.2
4,579,594	+				+0.3
4,579,594	+				+1.0
4,579,595	-				+0.5
4,579,595	-				+0.1
4,579,595	-				-0.1
4,579,595	-				+0.5
4,579,621	+				+0.6
4,579,621	+				+0.2
4,579,621	+				+1.0
4,579,621	+				+0.0
4,579,621	+				+0.9
4,579,621	+				+0.7
4,579,622	-				+0.0
4,579,622	-				+0.6
4,579,622	-				+0.0
4,579,622	-				+0.7
4,579,660	+				+0.2
4,579,660	+				+1.2
4,579,660	+				-0.6
4,579,660	+				-1.2
4,579,660	+				-2.5
4,579,661	-				-1.0
4,579,671	+				-1.3
4,579,671	+				+0.7
4,579,671	+				-0.4
4,579,671	+				-0.9
4,579,671	+				-0.5
4,579,671	+				+1.0
4,579,671	+				-0.7
4,579,672	-				-0.0
4,579,672	-				+0.2
4,579,672	-				-1.0
4,579,672	-				+0.6
4,579,672	-				+0.2
4,579,672	-				+0.3
4,579,672	-				-0.0
4,579,672	-				+0.9
4,579,738	+				+1.2
4,579,738	+				+2.4
4,579,738	+				-0.7
4,579,738	+				-0.5
4,579,738	+				+2.3
4,579,739	-				+0.0
4,579,786	+				-0.0
4,579,786	+				+1.3
4,579,786	+				+1.2
4,579,786	+				-0.6
4,579,786	+				+1.6
4,579,786	+				+0.0
4,579,787	-				+0.6
4,579,787	-				-0.6
4,579,787	-				-2.0
4,579,787	-				+0.4
4,579,787	-				+0.4
4,579,787	-				-1.4
4,579,838	+				-0.6
4,579,838	+				-1.0
4,579,838	+				-0.2
4,579,838	+				-0.5
4,579,954	+				+0.3
4,579,955	-				-1.7
4,579,956	+				-1.7
4,579,972	+				+1.3
4,579,972	+				-0.9
4,579,972	+				-1.0
4,579,972	+				-1.2
4,579,972	+				+0.8
4,579,973	-				+0.1
4,579,973	-				+0.4
4,579,973	-				+0.4
4,579,973	-				+0.2
4,579,973	-				-0.7
4,579,973	-				+0.5
4,579,973	-				+0.3
4,579,973	-				+1.2
4,580,055	+				-1.0
4,580,055	+				+1.2
4,580,055	+				-0.9
4,580,055	+				+1.3
4,580,055	+				-0.2
4,580,055	+				-0.3
4,580,056	-				-0.2
4,580,056	-				+1.5
4,580,056	-				-1.0
4,580,056	-				-0.6
4,580,056	-				+0.7
4,580,056	-				-1.5
4,580,056	-				+0.2
4,580,058	+				-0.6
4,580,058	+				-0.7
4,580,081	-				+1.2
4,580,099	+				-0.6
4,580,099	+				+1.8
4,580,100	-				+0.4
4,580,100	-				-1.0
4,580,100	-				-0.4
4,580,100	-				+0.7
4,580,100	-				+1.1
4,580,160	+				+1.4
4,580,160	+				+0.0
4,580,160	+				-1.1
4,580,160	+				+0.8
4,580,160	+				-1.4
4,580,161	-				-0.7
4,580,161	-				+0.1
4,580,228	-				-0.9
4,580,228	-				-0.9
4,580,230	+				-1.9
4,580,230	+				+0.2
4,580,230	+				-0.5
4,580,230	+				+0.1
4,580,230	+				-0.4
4,580,231	-				-0.1
4,580,231	-				-0.1
4,580,240	+				-0.0
4,580,240	+				-0.5
4,580,241	-				-0.9
4,580,241	-				+0.1
4,580,300	+				+0.6
4,580,300	+				-0.8
4,580,303	+				-0.0
4,580,304	-				+0.3
4,580,304	-				+1.1
4,580,339	+				+0.3
4,580,339	+				-0.4
4,580,339	+				+0.8
4,580,340	-				-0.2
4,580,340	-				+0.2
4,580,357	-				+1.0
4,580,388	+				-0.8
4,580,428	+				+0.6
4,580,428	+				+0.4
4,580,437	+				+0.0
4,580,469	-				+0.3
4,580,479	+				-1.9