Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS19175

Experiment: D-Glucose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C); with MOPS
4,336,064	+				-1.7
4,336,064	+				-0.1
4,336,095	+				+2.5
4,336,095	+				+1.5
4,336,096	-				-0.8
4,336,129	+				-2.0
4,336,129	+				+1.5
4,336,129	+				+0.9
4,336,129	+				-2.0
4,336,129	+				-0.5
4,336,130	-				-0.5
4,336,130	-				-0.1
4,336,130	-				-1.3
4,336,130	-				+0.9
4,336,130	-				+0.8
4,336,130	-				-0.5
4,336,219	-				+0.5
4,336,219	-				+0.9
4,336,268	-				-0.7
4,336,281	+				-0.5
4,336,281	+				-0.1
4,336,281	+				+0.9
4,336,281	+				-0.1
4,336,282	-				-0.4
4,336,282	-				+0.7
4,336,282	-				+0.7
4,336,282	-				-2.5
4,336,282	-				-2.4
4,336,282	-				-1.4
4,336,282	-				+0.7
4,336,283	+				-1.5
4,336,283	+				+0.9
4,336,283	+				+1.2
4,336,283	+				+1.5
4,336,283	+				+1.2
4,336,283	+				+1.7
4,336,283	+				+1.7
4,336,283	+				-2.1
4,336,283	+				+1.1
4,336,284	-				+0.4
4,336,284	-				-0.1
4,336,284	-				-0.4
4,336,284	-				-1.0
4,336,284	-				-0.6
4,336,284	-				+0.3
4,336,284	-				+0.6
4,336,284	-				+1.2
4,336,284	-				-0.2
4,336,284	-				-0.1
4,336,286	+				-1.1
4,336,286	+				+0.1
4,336,287	-				+0.6
4,336,287	-				-0.3
4,336,524	+		PFLU_RS19170	0.38	-0.8
4,336,609	+		PFLU_RS19170	0.51	-0.5
4,336,610	-		PFLU_RS19170	0.51	-0.1
4,336,610	-		PFLU_RS19170	0.51	-1.1
4,336,610	-		PFLU_RS19170	0.51	-1.5
4,336,610	-		PFLU_RS19170	0.51	-0.3
4,336,640	+		PFLU_RS19170	0.56	+1.5
4,336,640	+		PFLU_RS19170	0.56	+2.5
4,336,685	+		PFLU_RS19170	0.63	-2.0
4,336,685	+		PFLU_RS19170	0.63	-0.5
4,336,685	+		PFLU_RS19170	0.63	-0.1
4,336,685	+		PFLU_RS19170	0.63	-0.8
4,336,685	+		PFLU_RS19170	0.63	+2.1
4,336,686	-		PFLU_RS19170	0.63	+1.1
4,336,757	+		PFLU_RS19170	0.74	+0.5
4,336,757	+		PFLU_RS19170	0.74	+0.8
4,336,757	+		PFLU_RS19170	0.74	+0.2
4,336,757	+		PFLU_RS19170	0.74	-0.1
4,336,757	+		PFLU_RS19170	0.74	+1.5
4,336,757	+		PFLU_RS19170	0.74	-0.1
4,336,757	+		PFLU_RS19170	0.74	-0.5
4,336,757	+		PFLU_RS19170	0.74	+0.5
4,336,757	+		PFLU_RS19170	0.74	+1.5
4,336,757	+		PFLU_RS19170	0.74	-0.1
4,336,757	+		PFLU_RS19170	0.74	-0.8
4,336,757	+		PFLU_RS19170	0.74	+0.5
4,336,757	+		PFLU_RS19170	0.74	-0.5
4,336,757	+		PFLU_RS19170	0.74	-0.8
4,336,757	+		PFLU_RS19170	0.74	+0.5
4,336,757	+		PFLU_RS19170	0.74	-0.1
4,336,757	+		PFLU_RS19170	0.74	-0.1
4,336,757	+		PFLU_RS19170	0.74	-0.5
4,336,758	-		PFLU_RS19170	0.74	-0.5
4,336,758	-		PFLU_RS19170	0.74	+2.1
4,336,758	-		PFLU_RS19170	0.74	+0.2
4,336,758	-		PFLU_RS19170	0.74	+0.8
4,336,758	-		PFLU_RS19170	0.74	-0.1
4,336,758	-		PFLU_RS19170	0.74	+1.5
4,336,758	-		PFLU_RS19170	0.74	+1.5
4,336,758	-		PFLU_RS19170	0.74	-0.1
4,336,758	-		PFLU_RS19170	0.74	+0.5
4,336,758	-		PFLU_RS19170	0.74	-1.5
4,336,758	-		PFLU_RS19170	0.74	+0.5
4,336,811	+		PFLU_RS19170	0.83	-1.1
4,336,811	+		PFLU_RS19170	0.83	+0.5
4,336,812	-		PFLU_RS19170	0.83	+1.9
4,336,812	-		PFLU_RS19170	0.83	-1.1
4,336,821	-		PFLU_RS19170	0.84	+0.5
4,336,902	+				+0.5
4,336,904	+				+2.5
4,336,904	+				-0.1
4,336,904	+				-0.5
4,336,904	+				+1.5
4,336,905	-				-1.7
4,336,905	-				-1.3
4,336,905	-				-0.1
4,336,905	-				+0.2
4,336,905	-				+0.5
4,336,905	-				-1.1
4,336,912	-				-0.1
4,336,931	+				+0.5
4,336,941	+				-0.5
4,336,941	+				+1.3
4,336,941	+				+2.3
4,336,941	+				+0.5
4,336,941	+				-0.1
4,336,941	+				+1.8
4,336,942	-				-1.5
4,336,942	-				-0.4
4,336,942	-				-0.7
4,336,942	-				+1.0
4,336,942	-				+0.6
4,336,962	+				-0.8
4,336,963	-				-3.3
4,336,984	-				+0.0
4,336,984	-				+0.6
4,336,984	-				-1.8
4,336,984	-				-1.1
4,336,984	-				+0.5
4,337,081	-				+1.5
4,337,081	-				+1.0
4,337,160	+		PFLU_RS19175	0.11	+2.5
4,337,161	-		PFLU_RS19175	0.11	-0.7
4,337,161	-		PFLU_RS19175	0.11	+0.4
4,337,161	-		PFLU_RS19175	0.11	+0.5
4,337,161	-		PFLU_RS19175	0.11	-0.7
4,337,161	-		PFLU_RS19175	0.11	-1.4
4,337,161	-		PFLU_RS19175	0.11	-0.1
4,337,161	-		PFLU_RS19175	0.11	-0.6
4,337,161	-		PFLU_RS19175	0.11	-0.8
4,337,161	-		PFLU_RS19175	0.11	-1.7
4,337,164	-		PFLU_RS19175	0.12	-0.8
4,337,375	+		PFLU_RS19175	0.28	-0.1
4,337,594	-		PFLU_RS19175	0.44	-1.8
4,337,594	-		PFLU_RS19175	0.44	+0.5
4,337,661	+		PFLU_RS19175	0.50	-2.6
4,337,662	-		PFLU_RS19175	0.50	-1.2
4,337,688	-		PFLU_RS19175	0.52	-3.6
4,338,009	+		PFLU_RS19175	0.76	+0.3
4,338,009	+		PFLU_RS19175	0.76	+0.4
4,338,010	-		PFLU_RS19175	0.76	-3.2
4,338,010	-		PFLU_RS19175	0.76	-0.2
4,338,010	-		PFLU_RS19175	0.76	-1.5
4,338,010	-		PFLU_RS19175	0.76	+1.2
4,338,010	-		PFLU_RS19175	0.76	-0.7
4,338,010	-		PFLU_RS19175	0.76	-0.4
4,338,010	-		PFLU_RS19175	0.76	+0.0
4,338,010	-		PFLU_RS19175	0.76	-3.1
4,338,040	+		PFLU_RS19175	0.78	+1.5
4,338,040	+		PFLU_RS19175	0.78	-1.1
4,338,040	+		PFLU_RS19175	0.78	-0.2
4,338,040	+		PFLU_RS19175	0.78	+0.5
4,338,041	-		PFLU_RS19175	0.78	-1.1
4,338,041	-		PFLU_RS19175	0.78	-0.1
4,338,041	-		PFLU_RS19175	0.78	+0.5
4,338,096	+		PFLU_RS19175	0.83	-2.7
4,338,096	+		PFLU_RS19175	0.83	-2.3
4,338,096	+		PFLU_RS19175	0.83	-1.7
4,338,096	+		PFLU_RS19175	0.83	-0.1
4,338,097	-		PFLU_RS19175	0.83	-1.1
4,338,097	-		PFLU_RS19175	0.83	-1.5
4,338,299	-				-0.8
4,338,299	-				-2.8
4,338,299	-				-0.1
4,338,301	+				-2.0
4,338,301	+				-2.5
4,338,302	-				-3.1
4,338,302	-				-0.3
4,338,302	-				-2.4
4,338,326	+				-2.1
4,338,327	-				-1.6
4,338,386	+				-2.5
4,338,387	-				-1.2
4,338,387	-				-1.4
4,338,387	-				+1.2
4,338,413	+				-0.8
4,338,422	+				+0.3
4,338,423	-				+0.4
4,338,423	-				+0.5
4,338,446	+				+2.1
4,338,488	+				+0.9
4,338,488	+				-2.1
4,338,488	+				+0.9
4,338,488	+				+0.8
4,338,488	+				+2.2
4,338,489	-				-2.3
4,338,489	-				+0.9
4,338,489	-				-0.8
4,338,489	-				-0.7
4,338,489	-				-1.1
4,338,489	-				+0.7
4,338,489	-				-1.2
4,338,525	+				+0.8
4,338,525	+				-0.5
4,338,525	+				-2.4
4,338,525	+				-1.7
4,338,525	+				-1.1
4,338,525	+				-0.3
4,338,525	+				+0.7
4,338,525	+				+1.1
4,338,525	+				-0.4
4,338,525	+				+0.4
4,338,525	+				-1.0
4,338,525	+				-0.7
4,338,525	+				+0.6
4,338,526	-				+0.6
4,338,526	-				+0.3
4,338,526	-				+0.5
4,338,526	-				+0.6
4,338,526	-				+1.6
4,338,526	-				-0.9
4,338,526	-				-0.4
4,338,526	-				+0.5
4,338,526	-				-1.3
4,338,526	-				+0.5
4,338,526	-				-2.0
4,338,526	-				+0.5
4,338,526	-				+0.8
4,338,526	-				-0.6
4,338,526	-				+0.5
4,338,526	-				+0.9
4,338,526	-				-0.4
4,338,526	-				+0.8
4,338,526	-				-0.1
4,338,526	-				+0.3
4,338,527	+				+0.2
4,338,527	+				-0.4
4,338,527	+				+0.6
4,338,527	+				+0.8
4,338,527	+				+0.0
4,338,527	+				-1.2
4,338,527	+				-0.1
4,338,527	+				-0.0
4,338,527	+				+0.6
4,338,527	+				+0.5
4,338,527	+				-1.0
4,338,527	+				+0.4
4,338,527	+				+1.3
4,338,527	+				+0.7
4,338,527	+				+0.6
4,338,527	+				-2.8
4,338,527	+				+1.3
4,338,527	+				+0.5
4,338,527	+				+1.5
4,338,527	+				-1.2
4,338,527	+				+1.2
4,338,527	+				-1.1
4,338,527	+				+0.1
4,338,527	+				-1.4
4,338,527	+				-1.0
4,338,527	+				+2.3
4,338,527	+				+0.3
4,338,527	+				-1.3
4,338,527	+				+0.1
4,338,527	+				-0.2
4,338,527	+				+0.4
4,338,527	+				+0.1
4,338,528	-				+0.0
4,338,528	-				+0.6
4,338,528	-				-2.3
4,338,528	-				+1.0
4,338,528	-				+0.4
4,338,528	-				+0.2
4,338,528	-				-1.8
4,338,528	-				-1.1
4,338,528	-				-0.2
4,338,528	-				-0.6
4,338,528	-				-1.8
4,338,528	-				-1.7
4,338,528	-				+0.2
4,338,528	-				+1.4
4,338,528	-				-2.7
4,338,528	-				+0.8
4,338,528	-				+1.0
4,338,528	-				+0.3
4,338,528	-				-0.2
4,338,528	-				-1.0
4,338,528	-				-3.0
4,338,528	-				+0.7
4,338,528	-				+0.6
4,338,528	-				+0.5
4,338,528	-				+0.4
4,338,529	+				+1.0
4,338,529	+				+0.4
4,338,529	+				-0.2
4,338,529	+				+1.1
4,338,529	+				+0.8
4,338,529	+				-0.3
4,338,529	+				+0.4
4,338,529	+				+1.8
4,338,529	+				+0.6
4,338,529	+				+1.0
4,338,529	+				-0.3
4,338,529	+				+0.3
4,338,529	+				-0.7
4,338,529	+				+2.0
4,338,529	+				-1.1
4,338,529	+				-2.3
4,338,529	+				+0.8
4,338,529	+				-0.3
4,338,529	+				+0.9
4,338,529	+				-0.1
4,338,529	+				-0.5
4,338,529	+				+0.2
4,338,530	-				+0.4
4,338,530	-				-0.3
4,338,530	-				-2.0
4,338,530	-				-0.5
4,338,530	-				+0.2
4,338,530	-				-2.0
4,338,530	-				+0.7
4,338,530	-				+1.8
4,338,530	-				+1.2
4,338,530	-				+2.5
4,338,530	-				+0.5
4,338,530	-				+0.8
4,338,530	-				+1.7
4,338,530	-				-1.2
4,338,530	-				+1.2
4,338,530	-				+0.4
4,338,531	+				+0.5
4,338,531	+				-0.5
4,338,531	+				-1.2
4,338,531	+				+0.3
4,338,531	+				-1.0
4,338,531	+				-0.6
4,338,531	+				+0.4
4,338,531	+				-0.9
4,338,531	+				-2.6
4,338,531	+				+0.0
4,338,531	+				-0.5
4,338,531	+				+0.6
4,338,531	+				+1.0
4,338,531	+				-0.7
4,338,531	+				+0.5
4,338,531	+				+0.4
4,338,531	+				-0.4
4,338,531	+				-0.7
4,338,532	-				+0.9
4,338,532	-				-0.3
4,338,532	-				+1.1
4,338,532	-				+0.3
4,338,532	-				-0.3
4,338,532	-				-0.7
4,338,532	-				-0.1
4,338,532	-				+1.0
4,338,532	-				+1.3
4,338,532	-				-0.9
4,338,532	-				-1.1
4,338,532	-				+0.1
4,338,532	-				-0.7
4,338,532	-				+1.2
4,338,532	-				+0.6
4,338,532	-				+0.3
4,338,532	-				-0.5
4,338,532	-				+0.5
4,338,606	+				-0.0
4,338,606	+				-1.5
4,338,606	+				+1.8
4,338,606	+				+0.8
4,338,607	-				+1.4
4,338,607	-				-0.9
4,338,607	-				-1.1
4,338,607	-				+1.5
4,338,607	-				+0.1
4,338,610	+				-0.7
4,338,610	+				+0.1
4,338,610	+				+0.5
4,338,610	+				+0.2
4,338,610	+				-0.3
4,338,610	+				+0.1
4,338,610	+				+2.0
4,338,611	-				+0.1
4,338,611	-				+0.2
4,338,611	-				+1.0
4,338,611	-				+0.1
4,338,611	-				+0.1
4,338,611	-				-1.1
4,338,611	-				-0.0
4,338,611	-				+1.8
4,338,611	-				+0.2
4,338,611	-				-0.0
4,338,614	+				+0.2
4,338,615	-				-0.2
4,338,645	+				-0.2
4,338,663	-				-1.7
4,338,675	-				+0.4
4,338,826	-				-0.9
4,338,826	-				-0.8
4,338,872	-				+1.1
4,338,872	-				-0.4
4,338,973	-				-0.1
4,338,973	-				+0.7
4,339,016	-				-0.1
4,339,104	-				+0.9
4,339,104	-				+1.1
4,339,123	-				+1.5
4,339,205	-				+0.7
4,339,205	-				-0.5
4,339,208	-				+0.9
4,339,229	-				-0.3
4,339,229	-				+2.4
4,339,229	-				-1.6
4,339,236	-				-1.3
4,339,236	-				+0.5
4,339,236	-				-1.1
4,339,236	-				+1.5
4,339,236	-				-0.1
4,339,236	-				-0.6
4,339,236	-				+0.8
4,339,236	-				+1.0
4,339,236	-				+0.7
4,339,295	-				+0.5
4,339,295	-				+1.0
4,339,295	-				+0.8