Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS15305

Experiment: D-Glucose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C); with MOPS
3,428,536	+		PFLU_RS15300	0.56	-1.1
3,428,540	-		PFLU_RS15300	0.57	+0.9
3,428,540	-		PFLU_RS15300	0.57	+0.0
3,428,639	-		PFLU_RS15300	0.61	+0.6
3,428,935	+		PFLU_RS15300	0.74	+0.6
3,428,935	+		PFLU_RS15300	0.74	+0.3
3,428,936	-		PFLU_RS15300	0.74	+0.7
3,428,936	-		PFLU_RS15300	0.74	-0.2
3,428,936	-		PFLU_RS15300	0.74	+0.4
3,429,148	+		PFLU_RS15300	0.84	+0.9
3,429,149	-		PFLU_RS15300	0.84	+0.2
3,429,149	-		PFLU_RS15300	0.84	-1.1
3,429,205	+		PFLU_RS15300	0.86	-0.5
3,429,206	-		PFLU_RS15300	0.86	+0.7
3,429,206	-		PFLU_RS15300	0.86	+0.7
3,429,206	-		PFLU_RS15300	0.86	-1.1
3,429,272	-		PFLU_RS15300	0.89	+0.9
3,429,310	+				-0.7
3,429,347	-				-0.1
3,429,511	+				-0.6
3,429,511	+				-0.3
3,429,511	+				-0.4
3,429,540	+				-0.8
3,429,540	+				-1.4
3,429,540	+				+1.2
3,429,540	+				+0.4
3,429,540	+				+0.5
3,429,540	+				+0.1
3,429,541	-				+1.6
3,429,541	-				-0.1
3,429,541	-				+2.2
3,429,642	+				-0.2
3,429,642	+				-0.4
3,429,834	+		PFLU_RS15305	0.19	-1.0
3,429,835	-		PFLU_RS15305	0.19	-0.2
3,429,858	+		PFLU_RS15305	0.21	-0.4
3,430,044	+		PFLU_RS15305	0.32	+0.6
3,430,044	+		PFLU_RS15305	0.32	+0.5
3,430,044	+		PFLU_RS15305	0.32	-0.4
3,430,045	-		PFLU_RS15305	0.32	+0.9
3,430,045	-		PFLU_RS15305	0.32	-1.1
3,430,045	-		PFLU_RS15305	0.32	-1.1
3,430,089	+		PFLU_RS15305	0.35	-2.7
3,430,089	+		PFLU_RS15305	0.35	-1.1
3,430,089	+		PFLU_RS15305	0.35	+0.8
3,430,090	-		PFLU_RS15305	0.35	-1.6
3,430,284	+		PFLU_RS15305	0.47	+0.3
3,430,284	+		PFLU_RS15305	0.47	-0.1
3,430,285	-		PFLU_RS15305	0.47	+0.5
3,430,285	-		PFLU_RS15305	0.47	+3.4
3,430,285	-		PFLU_RS15305	0.47	+0.8
3,430,285	-		PFLU_RS15305	0.47	-0.7
3,430,392	+		PFLU_RS15305	0.53	-1.4
3,430,475	+		PFLU_RS15305	0.58	+0.2
3,430,476	-		PFLU_RS15305	0.58	+0.5
3,430,597	-		PFLU_RS15305	0.66	-1.6
3,430,602	+		PFLU_RS15305	0.66	-0.5
3,430,602	+		PFLU_RS15305	0.66	+1.5
3,430,602	+		PFLU_RS15305	0.66	-3.1
3,430,602	+		PFLU_RS15305	0.66	-1.1
3,430,602	+		PFLU_RS15305	0.66	+0.5
3,430,602	+		PFLU_RS15305	0.66	-1.2
3,430,602	+		PFLU_RS15305	0.66	+1.7
3,430,602	+		PFLU_RS15305	0.66	-0.8
3,430,602	+		PFLU_RS15305	0.66	-0.1
3,430,602	+		PFLU_RS15305	0.66	-0.3
3,430,602	+		PFLU_RS15305	0.66	+0.3
3,430,603	-		PFLU_RS15305	0.66	-0.0
3,430,603	-		PFLU_RS15305	0.66	+0.6
3,430,603	-		PFLU_RS15305	0.66	-0.5
3,430,603	-		PFLU_RS15305	0.66	-0.5
3,430,603	-		PFLU_RS15305	0.66	+0.4
3,430,603	-		PFLU_RS15305	0.66	-1.5
3,430,603	-		PFLU_RS15305	0.66	+0.5
3,430,704	+		PFLU_RS15305	0.72	+1.5
3,430,704	+		PFLU_RS15305	0.72	-0.1
3,430,704	+		PFLU_RS15305	0.72	+0.6
3,430,704	+		PFLU_RS15305	0.72	+0.9
3,430,705	-		PFLU_RS15305	0.72	+0.3
3,430,705	-		PFLU_RS15305	0.72	+0.8
3,430,953	+		PFLU_RS15305	0.87	-0.4
3,430,953	+		PFLU_RS15305	0.87	+0.2
3,430,953	+		PFLU_RS15305	0.87	-0.5
3,430,953	+		PFLU_RS15305	0.87	+0.2
3,430,953	+		PFLU_RS15305	0.87	-0.1
3,430,953	+		PFLU_RS15305	0.87	-1.4
3,430,953	+		PFLU_RS15305	0.87	+0.1
3,430,953	+		PFLU_RS15305	0.87	+0.5
3,430,953	+		PFLU_RS15305	0.87	-1.1
3,430,953	+		PFLU_RS15305	0.87	+1.1
3,430,953	+		PFLU_RS15305	0.87	-1.1
3,430,953	+		PFLU_RS15305	0.87	+1.2
3,430,953	+		PFLU_RS15305	0.87	-0.1
3,430,953	+		PFLU_RS15305	0.87	-0.3
3,430,953	+		PFLU_RS15305	0.87	-0.8
3,430,953	+		PFLU_RS15305	0.87	-0.9
3,430,953	+		PFLU_RS15305	0.87	+0.7
3,430,953	+		PFLU_RS15305	0.87	-0.8
3,430,953	+		PFLU_RS15305	0.87	-1.6
3,430,953	+		PFLU_RS15305	0.87	+1.8
3,430,953	+		PFLU_RS15305	0.87	+1.3
3,430,954	-		PFLU_RS15305	0.87	-1.6
3,430,954	-		PFLU_RS15305	0.87	-0.5
3,430,954	-		PFLU_RS15305	0.87	+1.0
3,430,954	-		PFLU_RS15305	0.87	+0.3
3,430,954	-		PFLU_RS15305	0.87	+0.7
3,430,954	-		PFLU_RS15305	0.87	-0.1
3,430,954	-		PFLU_RS15305	0.87	+0.6
3,430,954	-		PFLU_RS15305	0.87	-0.3
3,430,954	-		PFLU_RS15305	0.87	+0.9
3,430,954	-		PFLU_RS15305	0.87	+0.4
3,431,085	+				+0.4
3,431,085	+				-0.9
3,431,086	-				-2.1
3,431,122	+				+1.4
3,431,123	-				+0.0
3,431,123	-				+1.5
3,431,130	+				-0.4
3,431,131	-				+0.6
3,431,131	-				+0.4
3,431,133	+				+1.3
3,431,133	+				-0.6
3,431,133	+				+0.2
3,431,134	-				-1.9
3,431,134	-				+0.1
3,431,134	-				-0.1
3,431,134	-				+1.7
3,431,231	+				-0.6
3,431,231	+				-1.8
3,431,231	+				-0.1
3,431,232	-				+0.0
3,431,232	-				+0.9
3,431,232	-				+0.9
3,431,232	-				+0.1
3,431,235	+				-0.5
3,431,235	+				-0.2
3,431,235	+				+0.8
3,431,236	-				+1.8
3,431,236	-				-0.9
3,431,236	-				-0.3
3,431,236	-				+2.3
3,431,236	-				+0.4
3,431,236	-				+0.4
3,431,236	-				+0.4
3,431,236	-				+0.2
3,431,256	+				+0.0
3,431,256	+				+0.3
3,431,257	-				-0.5
3,431,257	-				-0.1
3,431,260	+				-1.6
3,431,260	+				-0.4
3,431,261	-				-0.3
3,431,261	-				+0.1
3,431,339	+				+0.7
3,431,339	+				+0.3
3,431,340	-				+0.4
3,431,340	-				-1.0
3,431,340	-				-0.1
3,431,347	-				+0.6
3,431,423	+		PFLU_RS15310	0.34	-0.9
3,431,424	-		PFLU_RS15310	0.34	-0.3
3,431,449	+		PFLU_RS15310	0.45	+0.8
3,431,449	+		PFLU_RS15310	0.45	+0.7
3,431,449	+		PFLU_RS15310	0.45	+0.8
3,431,449	+		PFLU_RS15310	0.45	-0.8
3,431,450	-		PFLU_RS15310	0.46	-0.0
3,431,450	-		PFLU_RS15310	0.46	-0.8
3,431,450	-		PFLU_RS15310	0.46	+1.4
3,431,450	-		PFLU_RS15310	0.46	-0.4
3,431,525	+		PFLU_RS15310	0.79	+0.2
3,431,589	+				-0.4
3,431,590	-				-1.1
3,431,628	-				+0.4
3,431,637	+				+0.7
3,431,637	+				+0.8
3,431,638	-				-0.6
3,431,897	+		PFLU_RS15315	0.14	-2.5
3,432,005	+		PFLU_RS15315	0.22	+0.5
3,432,005	+		PFLU_RS15315	0.22	-1.9
3,432,005	+		PFLU_RS15315	0.22	+0.1
3,432,006	-		PFLU_RS15315	0.22	+0.4
3,432,006	-		PFLU_RS15315	0.22	+1.5
3,432,118	+		PFLU_RS15315	0.30	+0.5