Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS07655

Experiment: D-Glucose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C); with MOPS
1,702,001	+		PFLU_RS07650	0.59	+0.0
1,702,001	+		PFLU_RS07650	0.59	-0.5
1,702,002	-		PFLU_RS07650	0.59	-0.1
1,702,002	-		PFLU_RS07650	0.59	-0.2
1,702,002	-		PFLU_RS07650	0.59	-0.9
1,702,002	-		PFLU_RS07650	0.59	-0.6
1,702,002	-		PFLU_RS07650	0.59	-0.8
1,702,079	+		PFLU_RS07650	0.63	-2.2
1,702,080	-		PFLU_RS07650	0.63	-2.6
1,702,080	-		PFLU_RS07650	0.63	-2.2
1,702,251	+		PFLU_RS07650	0.71	-1.2
1,702,252	-		PFLU_RS07650	0.71	-0.6
1,702,347	+		PFLU_RS07650	0.75	-0.5
1,702,348	-		PFLU_RS07650	0.75	-1.4
1,702,458	+		PFLU_RS07650	0.80	-2.5
1,702,458	+		PFLU_RS07650	0.80	-1.2
1,702,459	-		PFLU_RS07650	0.80	-2.1
1,702,500	+		PFLU_RS07650	0.82	-1.0
1,702,500	+		PFLU_RS07650	0.82	-0.5
1,702,506	+		PFLU_RS07650	0.83	-2.1
1,702,507	-		PFLU_RS07650	0.83	-0.0
1,702,507	-		PFLU_RS07650	0.83	+0.0
1,702,507	-		PFLU_RS07650	0.83	-2.6
1,702,507	-		PFLU_RS07650	0.83	-1.6
1,702,507	-		PFLU_RS07650	0.83	-0.8
1,702,507	-		PFLU_RS07650	0.83	-0.5
1,702,581	+		PFLU_RS07650	0.86	-1.2
1,702,581	+		PFLU_RS07650	0.86	-1.0
1,702,581	+		PFLU_RS07650	0.86	-2.0
1,702,581	+		PFLU_RS07650	0.86	+0.2
1,702,581	+		PFLU_RS07650	0.86	-1.8
1,702,581	+		PFLU_RS07650	0.86	-1.9
1,702,582	-		PFLU_RS07650	0.86	-1.9
1,702,582	-		PFLU_RS07650	0.86	-1.1
1,702,582	-		PFLU_RS07650	0.86	-0.0
1,702,582	-		PFLU_RS07650	0.86	-0.6
1,702,582	-		PFLU_RS07650	0.86	-2.5
1,702,582	-		PFLU_RS07650	0.86	-1.2
1,702,710	+				-0.7
1,702,710	+				-3.2
1,702,710	+				-1.4
1,702,710	+				-2.6
1,702,710	+				-1.1
1,702,710	+				-1.1
1,702,711	-				-1.8
1,702,711	-				-2.9
1,702,711	-				-1.5
1,702,711	-				-2.2
1,702,711	-				-1.7
1,702,711	-				-3.0
1,702,711	-				-1.8
1,702,752	+				-1.9
1,702,752	+				-1.0
1,702,752	+				-1.7
1,702,752	+				-1.0
1,702,753	-				-0.9
1,702,753	-				-1.8
1,702,753	-				-3.2
1,702,800	+				+0.0
1,702,800	+				-1.3
1,702,800	+				+0.4
1,702,800	+				-0.0
1,702,800	+				-0.7
1,702,800	+				-1.2
1,702,800	+				+0.4
1,702,800	+				-0.7
1,702,800	+				-3.1
1,702,800	+				-0.9
1,702,800	+				-1.1
1,702,801	-				-2.9
1,702,801	-				-1.5
1,702,801	-				-2.8
1,702,801	-				-1.8
1,702,801	-				-2.5
1,702,801	-				-1.6
1,702,821	+				-1.8
1,702,821	+				+0.1
1,702,822	-				-2.8
1,702,822	-				-1.4
1,702,894	+				-0.2
1,702,895	-				+1.4
1,702,905	+				+0.7
1,702,905	+				+0.0
1,702,905	+				+0.8
1,702,906	-				-0.2
1,702,906	-				+1.4
1,702,909	+				+0.9
1,702,909	+				+0.3
1,702,910	-				+2.2
1,702,910	-				-1.9
1,702,910	-				-1.4
1,702,910	-				-0.9
1,703,336	+		PFLU_RS07655	0.36	+0.4
1,703,337	-		PFLU_RS07655	0.36	-0.6
1,703,505	-		PFLU_RS07655	0.51	-0.6
1,703,505	-		PFLU_RS07655	0.51	-2.0
1,703,630	-		PFLU_RS07655	0.61	-1.4
1,703,630	-		PFLU_RS07655	0.61	-0.3
1,703,765	+		PFLU_RS07655	0.73	-1.6
1,703,765	+		PFLU_RS07655	0.73	-0.2
1,703,766	-		PFLU_RS07655	0.73	+0.1
1,703,975	-				-1.8
1,704,083	+				+0.8
1,704,083	+				+0.4
1,704,083	+				+0.3
1,704,083	+				+0.7
1,704,083	+				+0.5
1,704,084	-				-1.1
1,704,084	-				+0.3
1,704,084	-				-0.1
1,704,084	-				+2.4
1,704,084	-				-0.8
1,704,084	-				+0.2
1,704,084	-				-0.2
1,704,084	-				+0.5
1,704,084	-				+0.6
1,704,084	-				-2.0
1,704,084	-				-0.4
1,704,084	-				+0.5
1,704,084	-				-1.2
1,704,168	+				+1.3
1,704,168	+				+0.9
1,704,204	+				+0.3
1,704,213	+		PFLU_RS07660	0.13	+1.1
1,704,213	+		PFLU_RS07660	0.13	+0.3
1,704,213	+		PFLU_RS07660	0.13	+0.5
1,704,213	+		PFLU_RS07660	0.13	+1.9
1,704,213	+		PFLU_RS07660	0.13	-0.7
1,704,213	+		PFLU_RS07660	0.13	+0.2
1,704,213	+		PFLU_RS07660	0.13	+0.2
1,704,213	+		PFLU_RS07660	0.13	+1.2
1,704,213	+		PFLU_RS07660	0.13	+1.1
1,704,213	+		PFLU_RS07660	0.13	+2.1
1,704,213	+		PFLU_RS07660	0.13	+0.4
1,704,213	+		PFLU_RS07660	0.13	+1.3
1,704,214	-		PFLU_RS07660	0.13	-0.1
1,704,214	-		PFLU_RS07660	0.13	-0.5
1,704,214	-		PFLU_RS07660	0.13	-0.6
1,704,214	-		PFLU_RS07660	0.13	-0.6
1,704,214	-		PFLU_RS07660	0.13	+0.1
1,704,214	-		PFLU_RS07660	0.13	-0.2
1,704,214	-		PFLU_RS07660	0.13	+0.1
1,704,214	-		PFLU_RS07660	0.13	-0.3
1,704,214	-		PFLU_RS07660	0.13	+0.4
1,704,215	+		PFLU_RS07660	0.14	-0.8
1,704,215	+		PFLU_RS07660	0.14	+0.4
1,704,215	+		PFLU_RS07660	0.14	-1.0
1,704,215	+		PFLU_RS07660	0.14	-0.9
1,704,215	+		PFLU_RS07660	0.14	-0.5
1,704,215	+		PFLU_RS07660	0.14	+1.2
1,704,215	+		PFLU_RS07660	0.14	+0.4
1,704,215	+		PFLU_RS07660	0.14	+0.4
1,704,216	-		PFLU_RS07660	0.14	-3.3
1,704,216	-		PFLU_RS07660	0.14	+0.7
1,704,216	-		PFLU_RS07660	0.14	-0.2
1,704,216	-		PFLU_RS07660	0.14	+0.0
1,704,216	-		PFLU_RS07660	0.14	-1.4
1,704,216	-		PFLU_RS07660	0.14	-0.5
1,704,216	-		PFLU_RS07660	0.14	-0.0
1,704,216	-		PFLU_RS07660	0.14	-0.5
1,704,216	-		PFLU_RS07660	0.14	-0.1
1,704,216	-		PFLU_RS07660	0.14	+1.4
1,704,282	+		PFLU_RS07660	0.42	-0.5
1,704,282	+		PFLU_RS07660	0.42	+0.3
1,704,282	+		PFLU_RS07660	0.42	+0.5
1,704,282	+		PFLU_RS07660	0.42	-2.5
1,704,283	-		PFLU_RS07660	0.42	+0.1
1,704,283	-		PFLU_RS07660	0.42	-1.0
1,704,283	-		PFLU_RS07660	0.42	-0.2
1,704,283	-		PFLU_RS07660	0.42	-0.3
1,704,294	+		PFLU_RS07660	0.47	-0.4
1,704,294	+		PFLU_RS07660	0.47	-0.8
1,704,295	-		PFLU_RS07660	0.47	-1.5
1,704,295	-		PFLU_RS07660	0.47	-1.0
1,704,303	+		PFLU_RS07660	0.51	+1.1
1,704,304	-		PFLU_RS07660	0.51	+1.8
1,704,437	+				-0.8
1,704,437	+				+0.9
1,704,437	+				-0.7
1,704,466	+				-0.0
1,704,466	+				+0.6
1,704,466	+				+0.1
1,704,466	+				-0.3
1,704,466	+				+0.8
1,704,466	+				+0.3
1,704,466	+				+1.1
1,704,468	+				-0.6
1,704,468	+				-0.4
1,704,468	+				-0.7
1,704,468	+				+0.5
1,704,468	+				+0.5
1,704,468	+				+0.9
1,704,468	+				-0.4
1,704,468	+				+0.2
1,704,468	+				+1.4
1,704,468	+				+0.9
1,704,468	+				+1.4
1,704,468	+				+0.5
1,704,468	+				+0.5
1,704,468	+				-1.5
1,704,468	+				-1.8
1,704,468	+				+0.6
1,704,468	+				+1.0
1,704,468	+				+2.1
1,704,468	+				+1.2
1,704,468	+				-0.4
1,704,468	+				-0.2
1,704,468	+				+0.8
1,704,468	+				-0.4
1,704,468	+				+0.8
1,704,468	+				+0.1
1,704,468	+				+0.0
1,704,468	+				-0.0
1,704,468	+				+0.8
1,704,468	+				+0.7
1,704,468	+				+0.1
1,704,468	+				-1.1
1,704,468	+				+0.3
1,704,468	+				-0.1
1,704,468	+				+0.2
1,704,468	+				-0.4
1,704,468	+				-1.4
1,704,468	+				+0.0
1,704,468	+				+0.7
1,704,468	+				-0.2
1,704,468	+				+0.6
1,704,468	+				+1.4
1,704,468	+				+1.2
1,704,468	+				-0.1
1,704,468	+				+1.8
1,704,468	+				-1.2
1,704,468	+				-1.6
1,704,468	+				+0.4
1,704,468	+				+1.4
1,704,468	+				+0.3
1,704,468	+				-0.5
1,704,468	+				+0.1
1,704,468	+				+2.2
1,704,468	+				+0.2
1,704,468	+				+0.0
1,704,468	+				+0.9
1,704,468	+				+0.2
1,704,468	+				-0.6
1,704,468	+				-1.2
1,704,468	+				+0.2
1,704,468	+				+0.8
1,704,468	+				+0.6
1,704,468	+				-0.5
1,704,470	+				+1.4
1,704,470	+				+0.9
1,704,470	+				-1.4
1,704,470	+				+0.1
1,704,470	+				+0.3
1,704,470	+				+1.5
1,704,470	+				+1.1
1,704,470	+				+1.4
1,704,470	+				+0.5
1,704,470	+				+0.8
1,704,470	+				+0.7
1,704,470	+				-0.8
1,704,470	+				+0.4
1,704,470	+				+1.2
1,704,470	+				+0.3
1,704,470	+				-0.8
1,704,470	+				+0.8
1,704,470	+				+0.6
1,704,470	+				+0.2
1,704,470	+				-1.5
1,704,470	+				-0.2
1,704,470	+				-0.4
1,704,470	+				+0.7
1,704,470	+				+0.4
1,704,470	+				+0.5
1,704,470	+				+0.6
1,704,470	+				+0.4
1,704,470	+				-0.0
1,704,470	+				-0.8
1,704,470	+				+0.1
1,704,470	+				+0.1
1,704,470	+				+1.4
1,704,470	+				-1.3
1,704,470	+				+1.6
1,704,470	+				+0.2
1,704,470	+				-0.7
1,704,470	+				-0.8
1,704,470	+				-0.2
1,704,470	+				-1.0
1,704,470	+				+2.6
1,704,470	+				+0.8
1,704,470	+				+0.4
1,704,470	+				-0.2
1,704,471	-				+1.8
1,704,471	-				+0.2
1,704,472	+				+0.4
1,704,472	+				+1.2
1,704,472	+				+0.8
1,704,472	+				+0.1
1,704,472	+				-0.1
1,704,472	+				+1.1
1,704,472	+				+0.4
1,704,472	+				-1.2
1,704,472	+				+0.4
1,704,472	+				-1.0
1,704,472	+				-0.2
1,704,472	+				-0.2
1,704,472	+				+1.2
1,704,472	+				-0.2
1,704,472	+				+1.2
1,704,472	+				-2.2