Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_20515 and OH686_20520 are separated by 94 nucleotides OH686_20520 and OH686_20525 are separated by 369 nucleotides OH686_20525 and OH686_20530 overlap by 120 nucleotides OH686_20530 and OH686_20535 are separated by 83 nucleotides OH686_20535 and OH686_20540 are separated by 86 nucleotides
OH686_20515: OH686_20515 - hypothetical protein, at 4,189,522 to 4,189,989
_20515
OH686_20520: OH686_20520 - hypothetical protein, at 4,190,084 to 4,190,443
_20520
OH686_20525: OH686_20525 - hypothetical protein' product='hypothetical protein, at 4,190,813 to 4,191,196
_20525
OH686_20530: OH686_20530 - CDS, at 4,191,077 to 4,191,199
_20530
OH686_20535: OH686_20535 - hypothetical protein' product='hypothetical protein, at 4,191,283 to 4,191,654
_20535
OH686_20540: OH686_20540 - hypothetical protein' product='hypothetical protein, at 4,191,741 to 4,191,986
_20540
Position (kb) 4190
4191
4192 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4190.000 kb on + strand at 4190.001 kb on - strand at 4190.001 kb on - strand at 4190.011 kb on + strand at 4190.080 kb on + strand at 4190.081 kb on - strand at 4190.086 kb on - strand at 4190.112 kb on + strand at 4190.112 kb on + strand at 4190.113 kb on - strand at 4190.170 kb on + strand, within OH686_20520 at 4190.174 kb on + strand, within OH686_20520 at 4190.175 kb on - strand, within OH686_20520 at 4190.213 kb on - strand, within OH686_20520 at 4190.213 kb on - strand, within OH686_20520 at 4190.213 kb on - strand, within OH686_20520 at 4190.319 kb on - strand, within OH686_20520 at 4190.355 kb on + strand, within OH686_20520 at 4190.359 kb on + strand, within OH686_20520 at 4190.360 kb on - strand, within OH686_20520 at 4190.378 kb on + strand, within OH686_20520 at 4190.423 kb on + strand at 4190.423 kb on + strand at 4190.423 kb on + strand at 4190.437 kb on - strand at 4190.517 kb on + strand at 4190.518 kb on - strand at 4190.518 kb on - strand at 4190.518 kb on - strand at 4190.617 kb on - strand at 4190.722 kb on - strand at 4190.722 kb on - strand at 4190.824 kb on + strand at 4190.857 kb on - strand, within OH686_20525 at 4190.865 kb on - strand, within OH686_20525 at 4190.929 kb on - strand, within OH686_20525 at 4190.929 kb on - strand, within OH686_20525 at 4191.096 kb on - strand at 4191.116 kb on + strand at 4191.116 kb on + strand at 4191.189 kb on - strand at 4191.216 kb on - strand at 4191.374 kb on + strand, within OH686_20535 at 4191.454 kb on - strand, within OH686_20535 at 4191.538 kb on + strand, within OH686_20535 at 4191.675 kb on - strand at 4191.675 kb on - strand at 4191.736 kb on - strand at 4191.736 kb on - strand at 4191.751 kb on + strand at 4191.764 kb on - strand at 4191.764 kb on - strand at 4191.896 kb on + strand, within OH686_20540 at 4191.909 kb on + strand, within OH686_20540 at 4191.910 kb on - strand, within OH686_20540 at 4191.910 kb on - strand, within OH686_20540 at 4191.996 kb on + strand at 4192.001 kb on - strand at 4192.001 kb on - strand at 4192.003 kb on + strand at 4192.003 kb on + strand at 4192.004 kb on - strand at 4192.004 kb on - strand at 4192.026 kb on + strand at 4192.026 kb on + strand at 4192.026 kb on + strand at 4192.027 kb on - strand at 4192.027 kb on - strand at 4192.172 kb on + strand at 4192.172 kb on + strand at 4192.173 kb on - strand at 4192.173 kb on - strand at 4192.173 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 4,190,000 + -0.2 4,190,001 - -0.7 4,190,001 - +0.4 4,190,011 + -0.6 4,190,080 + +0.4 4,190,081 - -0.4 4,190,086 - +0.2 4,190,112 + -0.3 4,190,112 + +0.0 4,190,113 - -2.6 4,190,170 + OH686_20520 0.24 -0.6 4,190,174 + OH686_20520 0.25 +0.3 4,190,175 - OH686_20520 0.25 +1.8 4,190,213 - OH686_20520 0.36 -1.0 4,190,213 - OH686_20520 0.36 -0.5 4,190,213 - OH686_20520 0.36 -0.2 4,190,319 - OH686_20520 0.65 -2.2 4,190,355 + OH686_20520 0.75 -0.5 4,190,359 + OH686_20520 0.76 -0.1 4,190,360 - OH686_20520 0.77 -1.0 4,190,378 + OH686_20520 0.82 +0.0 4,190,423 + +0.4 4,190,423 + +0.3 4,190,423 + -0.4 4,190,437 - +0.4 4,190,517 + -0.6 4,190,518 - -0.9 4,190,518 - +0.5 4,190,518 - -0.2 4,190,617 - -0.6 4,190,722 - -2.1 4,190,722 - +0.4 4,190,824 + -0.2 4,190,857 - OH686_20525 0.11 -0.5 4,190,865 - OH686_20525 0.14 +0.3 4,190,929 - OH686_20525 0.30 +0.4 4,190,929 - OH686_20525 0.30 +1.6 4,191,096 - -1.0 4,191,116 + -0.5 4,191,116 + -1.2 4,191,189 - -0.1 4,191,216 - -0.1 4,191,374 + OH686_20535 0.24 -0.3 4,191,454 - OH686_20535 0.46 -0.3 4,191,538 + OH686_20535 0.69 +0.6 4,191,675 - +0.6 4,191,675 - +0.3 4,191,736 - -0.5 4,191,736 - +0.4 4,191,751 + -0.3 4,191,764 - -0.2 4,191,764 - +0.1 4,191,896 + OH686_20540 0.63 -0.3 4,191,909 + OH686_20540 0.68 -0.4 4,191,910 - OH686_20540 0.69 -0.0 4,191,910 - OH686_20540 0.69 -0.4 4,191,996 + +0.1 4,192,001 - +0.1 4,192,001 - +0.4 4,192,003 + -0.4 4,192,003 + -0.5 4,192,004 - +0.5 4,192,004 - -0.3 4,192,026 + +0.8 4,192,026 + +0.3 4,192,026 + -0.6 4,192,027 - -1.0 4,192,027 - -0.2 4,192,172 + -0.1 4,192,172 + -1.2 4,192,173 - -0.1 4,192,173 - -0.6 4,192,173 - +1.4
Or see this region's nucleotide sequence