Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_20320 and OH686_20325 are separated by 839 nucleotides OH686_20325 and OH686_20330 are separated by 2 nucleotides OH686_20330 and OH686_20335 are separated by 157 nucleotides
OH686_20320: OH686_20320 - hypothetical protein, at 4,146,695 to 4,146,964
_20320
OH686_20325: OH686_20325 - hypothetical protein' product='hypothetical protein, at 4,147,804 to 4,148,385
_20325
OH686_20330: OH686_20330 - hypothetical protein, at 4,148,388 to 4,149,026
_20330
OH686_20335: OH686_20335 - Ribonucleotide reductase of class Ia (aerobic), beta subunit , at 4,149,184 to 4,150,449
_20335
Position (kb)
4147
4148
4149 Strain fitness (log2 ratio)
-1
0
1 at 4146.817 kb on + strand, within OH686_20320 at 4146.818 kb on - strand, within OH686_20320 at 4146.818 kb on - strand, within OH686_20320 at 4147.086 kb on + strand at 4147.086 kb on + strand at 4147.111 kb on - strand at 4147.111 kb on - strand at 4147.131 kb on - strand at 4147.193 kb on - strand at 4147.193 kb on - strand at 4147.216 kb on - strand at 4147.216 kb on - strand at 4147.216 kb on - strand at 4147.216 kb on - strand at 4147.317 kb on + strand at 4147.317 kb on + strand at 4147.318 kb on - strand at 4147.318 kb on - strand at 4147.318 kb on - strand at 4147.336 kb on + strand at 4147.336 kb on + strand at 4147.336 kb on + strand at 4147.337 kb on - strand at 4147.337 kb on - strand at 4147.337 kb on - strand at 4147.379 kb on + strand at 4147.398 kb on - strand at 4147.406 kb on + strand at 4147.520 kb on + strand at 4147.520 kb on + strand at 4147.520 kb on + strand at 4147.520 kb on + strand at 4147.520 kb on + strand at 4147.520 kb on + strand at 4147.521 kb on - strand at 4147.521 kb on - strand at 4147.535 kb on - strand at 4147.535 kb on - strand at 4147.557 kb on + strand at 4147.557 kb on + strand at 4147.558 kb on - strand at 4147.558 kb on - strand at 4147.558 kb on - strand at 4147.558 kb on - strand at 4147.642 kb on - strand at 4147.776 kb on - strand at 4147.812 kb on + strand at 4147.832 kb on - strand at 4147.878 kb on + strand, within OH686_20325 at 4147.879 kb on - strand, within OH686_20325 at 4147.879 kb on - strand, within OH686_20325 at 4147.879 kb on - strand, within OH686_20325 at 4147.900 kb on + strand, within OH686_20325 at 4147.991 kb on - strand, within OH686_20325 at 4147.991 kb on - strand, within OH686_20325 at 4148.050 kb on + strand, within OH686_20325 at 4148.126 kb on + strand, within OH686_20325 at 4148.174 kb on - strand, within OH686_20325 at 4148.180 kb on + strand, within OH686_20325 at 4148.181 kb on - strand, within OH686_20325 at 4148.207 kb on - strand, within OH686_20325 at 4148.250 kb on - strand, within OH686_20325 at 4148.250 kb on - strand, within OH686_20325 at 4148.468 kb on + strand, within OH686_20330 at 4148.469 kb on - strand, within OH686_20330 at 4148.469 kb on - strand, within OH686_20330 at 4148.477 kb on - strand, within OH686_20330 at 4148.493 kb on - strand, within OH686_20330 at 4148.493 kb on - strand, within OH686_20330 at 4148.504 kb on + strand, within OH686_20330 at 4148.505 kb on - strand, within OH686_20330 at 4148.514 kb on - strand, within OH686_20330 at 4148.533 kb on - strand, within OH686_20330 at 4148.587 kb on - strand, within OH686_20330 at 4148.749 kb on - strand, within OH686_20330 at 4149.012 kb on + strand at 4149.042 kb on - strand at 4149.054 kb on + strand at 4149.079 kb on + strand at 4149.113 kb on + strand at 4149.113 kb on + strand at 4149.113 kb on + strand at 4149.113 kb on + strand at 4149.185 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 4,146,817 + OH686_20320 0.45 -1.1 4,146,818 - OH686_20320 0.46 -0.2 4,146,818 - OH686_20320 0.46 -0.3 4,147,086 + +0.5 4,147,086 + -0.2 4,147,111 - -0.0 4,147,111 - -0.2 4,147,131 - -0.7 4,147,193 - +0.5 4,147,193 - -0.5 4,147,216 - +0.6 4,147,216 - +0.9 4,147,216 - +0.6 4,147,216 - +0.1 4,147,317 + +0.6 4,147,317 + +0.3 4,147,318 - +1.4 4,147,318 - +0.1 4,147,318 - -0.1 4,147,336 + -0.9 4,147,336 + -1.2 4,147,336 + -0.9 4,147,337 - +1.6 4,147,337 - +0.7 4,147,337 - -0.9 4,147,379 + +0.6 4,147,398 - +1.2 4,147,406 + +0.4 4,147,520 + -0.4 4,147,520 + -1.4 4,147,520 + +0.7 4,147,520 + +0.1 4,147,520 + +0.5 4,147,520 + +0.4 4,147,521 - -0.5 4,147,521 - -0.2 4,147,535 - -0.4 4,147,535 - -0.5 4,147,557 + -1.0 4,147,557 + +0.3 4,147,558 - +0.0 4,147,558 - -0.7 4,147,558 - -0.5 4,147,558 - -0.9 4,147,642 - -0.4 4,147,776 - -0.1 4,147,812 + -0.6 4,147,832 - +0.3 4,147,878 + OH686_20325 0.13 +0.4 4,147,879 - OH686_20325 0.13 -0.0 4,147,879 - OH686_20325 0.13 -0.8 4,147,879 - OH686_20325 0.13 +0.4 4,147,900 + OH686_20325 0.16 -0.4 4,147,991 - OH686_20325 0.32 +0.3 4,147,991 - OH686_20325 0.32 +0.9 4,148,050 + OH686_20325 0.42 -0.3 4,148,126 + OH686_20325 0.55 +0.0 4,148,174 - OH686_20325 0.64 +0.0 4,148,180 + OH686_20325 0.65 -0.7 4,148,181 - OH686_20325 0.65 +1.0 4,148,207 - OH686_20325 0.69 -0.6 4,148,250 - OH686_20325 0.77 +0.5 4,148,250 - OH686_20325 0.77 +1.6 4,148,468 + OH686_20330 0.13 +1.2 4,148,469 - OH686_20330 0.13 +0.2 4,148,469 - OH686_20330 0.13 +0.0 4,148,477 - OH686_20330 0.14 -0.6 4,148,493 - OH686_20330 0.16 -0.2 4,148,493 - OH686_20330 0.16 -1.1 4,148,504 + OH686_20330 0.18 +0.1 4,148,505 - OH686_20330 0.18 +0.0 4,148,514 - OH686_20330 0.20 +0.2 4,148,533 - OH686_20330 0.23 +0.6 4,148,587 - OH686_20330 0.31 +0.1 4,148,749 - OH686_20330 0.56 +0.2 4,149,012 + -0.9 4,149,042 - -0.3 4,149,054 + +0.2 4,149,079 + -0.3 4,149,113 + +0.2 4,149,113 + +0.5 4,149,113 + -1.0 4,149,113 + +0.2 4,149,185 + +0.1
Or see this region's nucleotide sequence