Experiment: m.b. Thallium(I) acetate 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4641 and Echvi_4642 are separated by 5 nucleotides Echvi_4642 and Echvi_4643 are separated by 152 nucleotides
Echvi_4641: Echvi_4641 - Outer membrane protein and related peptidoglycan-associated (lipo)proteins, at 5,553,707 to 5,555,617
_4641
Echvi_4642: Echvi_4642 - Organic radical activating enzymes, at 5,555,623 to 5,556,249
_4642
Echvi_4643: Echvi_4643 - 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase, at 5,556,402 to 5,557,286
_4643
Position (kb)
5555
5556
5557 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 5554.688 kb on - strand, within Echvi_4641 at 5554.831 kb on + strand, within Echvi_4641 at 5554.831 kb on + strand, within Echvi_4641 at 5554.831 kb on + strand, within Echvi_4641 at 5554.834 kb on - strand, within Echvi_4641 at 5554.834 kb on - strand, within Echvi_4641 at 5554.834 kb on - strand, within Echvi_4641 at 5554.842 kb on + strand, within Echvi_4641 at 5554.842 kb on + strand, within Echvi_4641 at 5554.842 kb on + strand, within Echvi_4641 at 5554.842 kb on + strand, within Echvi_4641 at 5554.843 kb on - strand, within Echvi_4641 at 5554.843 kb on - strand, within Echvi_4641 at 5554.844 kb on + strand, within Echvi_4641 at 5554.844 kb on + strand, within Echvi_4641 at 5554.845 kb on - strand, within Echvi_4641 at 5554.845 kb on - strand, within Echvi_4641 at 5554.885 kb on + strand, within Echvi_4641 at 5554.887 kb on + strand, within Echvi_4641 at 5554.887 kb on + strand, within Echvi_4641 at 5554.919 kb on - strand, within Echvi_4641 at 5554.924 kb on + strand, within Echvi_4641 at 5554.924 kb on + strand, within Echvi_4641 at 5554.925 kb on - strand, within Echvi_4641 at 5554.925 kb on - strand, within Echvi_4641 at 5555.002 kb on + strand, within Echvi_4641 at 5555.048 kb on - strand, within Echvi_4641 at 5555.108 kb on + strand, within Echvi_4641 at 5555.213 kb on + strand, within Echvi_4641 at 5555.213 kb on + strand, within Echvi_4641 at 5555.213 kb on + strand, within Echvi_4641 at 5555.214 kb on - strand, within Echvi_4641 at 5555.287 kb on - strand, within Echvi_4641 at 5555.287 kb on - strand, within Echvi_4641 at 5555.288 kb on + strand, within Echvi_4641 at 5555.288 kb on + strand, within Echvi_4641 at 5555.288 kb on + strand, within Echvi_4641 at 5555.289 kb on - strand, within Echvi_4641 at 5555.289 kb on - strand, within Echvi_4641 at 5555.290 kb on + strand, within Echvi_4641 at 5555.290 kb on + strand, within Echvi_4641 at 5555.290 kb on + strand, within Echvi_4641 at 5555.290 kb on + strand, within Echvi_4641 at 5555.290 kb on + strand, within Echvi_4641 at 5555.291 kb on - strand, within Echvi_4641 at 5555.291 kb on - strand, within Echvi_4641 at 5555.291 kb on - strand, within Echvi_4641 at 5555.291 kb on - strand, within Echvi_4641 at 5555.291 kb on - strand, within Echvi_4641 at 5555.291 kb on - strand, within Echvi_4641 at 5555.291 kb on - strand, within Echvi_4641 at 5555.301 kb on - strand, within Echvi_4641 at 5555.309 kb on - strand, within Echvi_4641 at 5555.364 kb on - strand, within Echvi_4641 at 5555.396 kb on - strand, within Echvi_4641 at 5555.402 kb on + strand, within Echvi_4641 at 5555.402 kb on + strand, within Echvi_4641 at 5555.402 kb on + strand, within Echvi_4641 at 5555.422 kb on - strand, within Echvi_4641 at 5555.464 kb on - strand at 5555.522 kb on + strand at 5555.522 kb on + strand at 5555.522 kb on + strand at 5555.522 kb on + strand at 5555.522 kb on + strand at 5555.523 kb on - strand at 5555.523 kb on - strand at 5555.540 kb on - strand at 5555.551 kb on + strand at 5555.553 kb on + strand at 5555.554 kb on - strand at 5555.554 kb on - strand at 5555.554 kb on - strand at 5555.600 kb on + strand at 5555.624 kb on + strand at 5555.638 kb on - strand at 5555.706 kb on + strand, within Echvi_4642 at 5555.707 kb on - strand, within Echvi_4642 at 5555.820 kb on + strand, within Echvi_4642 at 5555.820 kb on + strand, within Echvi_4642 at 5555.821 kb on - strand, within Echvi_4642 at 5555.977 kb on + strand, within Echvi_4642 at 5555.985 kb on - strand, within Echvi_4642 at 5555.985 kb on - strand, within Echvi_4642 at 5556.030 kb on - strand, within Echvi_4642 at 5556.112 kb on + strand, within Echvi_4642 at 5556.113 kb on - strand, within Echvi_4642 at 5556.113 kb on - strand, within Echvi_4642 at 5556.136 kb on + strand, within Echvi_4642 at 5556.192 kb on - strand at 5556.250 kb on - strand at 5556.252 kb on + strand at 5556.254 kb on + strand at 5556.266 kb on + strand at 5556.289 kb on - strand at 5556.351 kb on + strand at 5556.351 kb on + strand at 5556.351 kb on + strand at 5556.362 kb on - strand at 5556.362 kb on - strand at 5556.409 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.01 mg/ml remove 5,554,688 - Echvi_4641 0.51 -1.1 5,554,831 + Echvi_4641 0.59 -0.5 5,554,831 + Echvi_4641 0.59 -0.4 5,554,831 + Echvi_4641 0.59 -0.1 5,554,834 - Echvi_4641 0.59 +0.5 5,554,834 - Echvi_4641 0.59 -0.3 5,554,834 - Echvi_4641 0.59 +0.2 5,554,842 + Echvi_4641 0.59 -0.3 5,554,842 + Echvi_4641 0.59 +0.3 5,554,842 + Echvi_4641 0.59 -0.9 5,554,842 + Echvi_4641 0.59 +0.9 5,554,843 - Echvi_4641 0.59 +0.2 5,554,843 - Echvi_4641 0.59 -0.2 5,554,844 + Echvi_4641 0.59 +0.5 5,554,844 + Echvi_4641 0.59 -0.2 5,554,845 - Echvi_4641 0.60 -1.3 5,554,845 - Echvi_4641 0.60 +0.4 5,554,885 + Echvi_4641 0.62 +0.4 5,554,887 + Echvi_4641 0.62 +0.5 5,554,887 + Echvi_4641 0.62 -0.5 5,554,919 - Echvi_4641 0.63 -0.1 5,554,924 + Echvi_4641 0.64 +0.2 5,554,924 + Echvi_4641 0.64 -0.6 5,554,925 - Echvi_4641 0.64 -0.9 5,554,925 - Echvi_4641 0.64 -3.0 5,555,002 + Echvi_4641 0.68 +0.4 5,555,048 - Echvi_4641 0.70 +0.7 5,555,108 + Echvi_4641 0.73 +0.1 5,555,213 + Echvi_4641 0.79 +1.0 5,555,213 + Echvi_4641 0.79 -0.7 5,555,213 + Echvi_4641 0.79 -0.2 5,555,214 - Echvi_4641 0.79 +0.4 5,555,287 - Echvi_4641 0.83 +0.7 5,555,287 - Echvi_4641 0.83 -0.1 5,555,288 + Echvi_4641 0.83 +0.2 5,555,288 + Echvi_4641 0.83 +0.9 5,555,288 + Echvi_4641 0.83 +0.6 5,555,289 - Echvi_4641 0.83 -0.5 5,555,289 - Echvi_4641 0.83 -0.4 5,555,290 + Echvi_4641 0.83 -0.4 5,555,290 + Echvi_4641 0.83 +0.6 5,555,290 + Echvi_4641 0.83 +0.9 5,555,290 + Echvi_4641 0.83 +0.4 5,555,290 + Echvi_4641 0.83 -0.4 5,555,291 - Echvi_4641 0.83 +0.2 5,555,291 - Echvi_4641 0.83 -0.7 5,555,291 - Echvi_4641 0.83 +0.3 5,555,291 - Echvi_4641 0.83 +0.4 5,555,291 - Echvi_4641 0.83 +0.5 5,555,291 - Echvi_4641 0.83 -0.1 5,555,291 - Echvi_4641 0.83 +0.3 5,555,301 - Echvi_4641 0.83 +0.7 5,555,309 - Echvi_4641 0.84 -1.7 5,555,364 - Echvi_4641 0.87 +0.4 5,555,396 - Echvi_4641 0.88 -0.5 5,555,402 + Echvi_4641 0.89 -0.1 5,555,402 + Echvi_4641 0.89 -0.7 5,555,402 + Echvi_4641 0.89 +0.7 5,555,422 - Echvi_4641 0.90 +0.9 5,555,464 - +0.6 5,555,522 + -0.3 5,555,522 + +0.2 5,555,522 + -0.2 5,555,522 + +0.0 5,555,522 + -0.0 5,555,523 - +0.0 5,555,523 - -0.4 5,555,540 - -0.2 5,555,551 + -0.4 5,555,553 + -1.8 5,555,554 - -0.3 5,555,554 - -0.6 5,555,554 - +0.5 5,555,600 + +0.7 5,555,624 + -0.7 5,555,638 - -0.8 5,555,706 + Echvi_4642 0.13 -0.2 5,555,707 - Echvi_4642 0.13 -1.0 5,555,820 + Echvi_4642 0.31 -0.4 5,555,820 + Echvi_4642 0.31 -0.3 5,555,821 - Echvi_4642 0.32 -2.0 5,555,977 + Echvi_4642 0.56 -1.0 5,555,985 - Echvi_4642 0.58 -0.7 5,555,985 - Echvi_4642 0.58 +0.1 5,556,030 - Echvi_4642 0.65 -0.6 5,556,112 + Echvi_4642 0.78 +0.2 5,556,113 - Echvi_4642 0.78 -0.0 5,556,113 - Echvi_4642 0.78 +0.3 5,556,136 + Echvi_4642 0.82 +0.5 5,556,192 - -1.0 5,556,250 - -0.3 5,556,252 + -0.6 5,556,254 + +1.3 5,556,266 + +0.3 5,556,289 - -0.1 5,556,351 + +0.7 5,556,351 + +0.3 5,556,351 + -0.0 5,556,362 - +0.5 5,556,362 - -0.3 5,556,409 + -0.2
Or see this region's nucleotide sequence