Experiment: m.b. Thallium(I) acetate 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3991 and Echvi_3992 are separated by 10 nucleotides Echvi_3992 and Echvi_3993 overlap by 1 nucleotides Echvi_3993 and Echvi_3994 overlap by 11 nucleotides
Echvi_3991: Echvi_3991 - Uncharacterized conserved protein, at 4,786,990 to 4,788,414
_3991
Echvi_3992: Echvi_3992 - Uncharacterized protein conserved in bacteria, at 4,788,425 to 4,789,402
_3992
Echvi_3993: Echvi_3993 - Predicted proteasome-type protease, at 4,789,402 to 4,790,145
_3993
Echvi_3994: Echvi_3994 - Transglutaminase-like enzymes, putative cysteine proteases, at 4,790,135 to 4,790,998
_3994
Position (kb)
4788
4789
4790 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 4787.489 kb on + strand, within Echvi_3991 at 4787.512 kb on + strand, within Echvi_3991 at 4787.513 kb on - strand, within Echvi_3991 at 4787.701 kb on + strand, within Echvi_3991 at 4787.701 kb on + strand, within Echvi_3991 at 4787.702 kb on - strand, within Echvi_3991 at 4787.770 kb on + strand, within Echvi_3991 at 4787.807 kb on + strand, within Echvi_3991 at 4787.823 kb on - strand, within Echvi_3991 at 4787.823 kb on - strand, within Echvi_3991 at 4787.896 kb on + strand, within Echvi_3991 at 4787.897 kb on - strand, within Echvi_3991 at 4787.897 kb on - strand, within Echvi_3991 at 4787.898 kb on + strand, within Echvi_3991 at 4787.898 kb on + strand, within Echvi_3991 at 4787.898 kb on + strand, within Echvi_3991 at 4787.898 kb on + strand, within Echvi_3991 at 4787.898 kb on + strand, within Echvi_3991 at 4787.899 kb on - strand, within Echvi_3991 at 4787.899 kb on - strand, within Echvi_3991 at 4787.899 kb on - strand, within Echvi_3991 at 4787.899 kb on - strand, within Echvi_3991 at 4787.899 kb on - strand, within Echvi_3991 at 4787.943 kb on - strand, within Echvi_3991 at 4787.963 kb on - strand, within Echvi_3991 at 4787.963 kb on - strand, within Echvi_3991 at 4787.963 kb on - strand, within Echvi_3991 at 4787.963 kb on - strand, within Echvi_3991 at 4787.968 kb on + strand at 4787.968 kb on + strand, within Echvi_3991 at 4787.968 kb on + strand, within Echvi_3991 at 4787.969 kb on - strand, within Echvi_3991 at 4787.969 kb on - strand, within Echvi_3991 at 4787.985 kb on + strand, within Echvi_3991 at 4787.985 kb on + strand, within Echvi_3991 at 4787.986 kb on - strand, within Echvi_3991 at 4787.989 kb on + strand, within Echvi_3991 at 4788.031 kb on + strand, within Echvi_3991 at 4788.031 kb on + strand, within Echvi_3991 at 4788.031 kb on + strand, within Echvi_3991 at 4788.032 kb on - strand, within Echvi_3991 at 4788.061 kb on + strand, within Echvi_3991 at 4788.061 kb on + strand, within Echvi_3991 at 4788.061 kb on + strand, within Echvi_3991 at 4788.062 kb on - strand, within Echvi_3991 at 4788.062 kb on - strand, within Echvi_3991 at 4788.065 kb on + strand, within Echvi_3991 at 4788.065 kb on + strand, within Echvi_3991 at 4788.065 kb on + strand, within Echvi_3991 at 4788.066 kb on - strand, within Echvi_3991 at 4788.066 kb on - strand, within Echvi_3991 at 4788.066 kb on - strand, within Echvi_3991 at 4788.200 kb on - strand, within Echvi_3991 at 4788.200 kb on - strand, within Echvi_3991 at 4788.246 kb on - strand, within Echvi_3991 at 4788.286 kb on + strand at 4788.287 kb on - strand at 4788.296 kb on - strand at 4788.296 kb on - strand at 4788.296 kb on - strand at 4788.315 kb on - strand at 4788.315 kb on - strand at 4788.315 kb on - strand at 4788.315 kb on - strand at 4788.396 kb on + strand at 4788.397 kb on - strand at 4788.397 kb on - strand at 4788.409 kb on + strand at 4788.430 kb on - strand at 4788.467 kb on + strand at 4788.543 kb on + strand, within Echvi_3992 at 4788.635 kb on + strand, within Echvi_3992 at 4788.640 kb on + strand, within Echvi_3992 at 4788.670 kb on + strand, within Echvi_3992 at 4788.670 kb on + strand, within Echvi_3992 at 4788.671 kb on - strand, within Echvi_3992 at 4788.676 kb on - strand, within Echvi_3992 at 4788.676 kb on - strand at 4788.679 kb on + strand, within Echvi_3992 at 4788.679 kb on + strand, within Echvi_3992 at 4788.680 kb on - strand, within Echvi_3992 at 4788.680 kb on - strand, within Echvi_3992 at 4788.680 kb on - strand, within Echvi_3992 at 4788.686 kb on - strand, within Echvi_3992 at 4788.689 kb on + strand, within Echvi_3992 at 4788.689 kb on + strand, within Echvi_3992 at 4788.690 kb on - strand, within Echvi_3992 at 4788.690 kb on - strand, within Echvi_3992 at 4788.762 kb on - strand, within Echvi_3992 at 4788.814 kb on + strand, within Echvi_3992 at 4788.839 kb on + strand, within Echvi_3992 at 4788.899 kb on + strand, within Echvi_3992 at 4788.900 kb on - strand, within Echvi_3992 at 4788.900 kb on - strand, within Echvi_3992 at 4788.921 kb on - strand, within Echvi_3992 at 4788.946 kb on + strand, within Echvi_3992 at 4788.947 kb on - strand, within Echvi_3992 at 4788.955 kb on - strand, within Echvi_3992 at 4788.955 kb on - strand, within Echvi_3992 at 4788.955 kb on - strand, within Echvi_3992 at 4788.955 kb on - strand, within Echvi_3992 at 4788.966 kb on - strand, within Echvi_3992 at 4789.061 kb on + strand, within Echvi_3992 at 4789.061 kb on + strand, within Echvi_3992 at 4789.061 kb on + strand, within Echvi_3992 at 4789.062 kb on - strand, within Echvi_3992 at 4789.110 kb on + strand, within Echvi_3992 at 4789.111 kb on - strand, within Echvi_3992 at 4789.142 kb on + strand, within Echvi_3992 at 4789.142 kb on + strand, within Echvi_3992 at 4789.143 kb on - strand, within Echvi_3992 at 4789.143 kb on - strand, within Echvi_3992 at 4789.143 kb on - strand, within Echvi_3992 at 4789.174 kb on - strand, within Echvi_3992 at 4789.258 kb on + strand, within Echvi_3992 at 4789.259 kb on - strand, within Echvi_3992 at 4789.264 kb on + strand, within Echvi_3992 at 4789.366 kb on + strand at 4789.437 kb on + strand at 4789.437 kb on + strand at 4789.500 kb on - strand, within Echvi_3993 at 4789.502 kb on - strand, within Echvi_3993 at 4789.575 kb on + strand, within Echvi_3993 at 4789.575 kb on + strand, within Echvi_3993 at 4789.575 kb on + strand, within Echvi_3993 at 4789.575 kb on + strand, within Echvi_3993 at 4789.575 kb on + strand, within Echvi_3993 at 4789.576 kb on - strand, within Echvi_3993 at 4789.768 kb on + strand, within Echvi_3993 at 4789.876 kb on + strand, within Echvi_3993 at 4789.877 kb on - strand, within Echvi_3993 at 4789.936 kb on - strand, within Echvi_3993 at 4789.952 kb on + strand, within Echvi_3993 at 4789.999 kb on - strand, within Echvi_3993 at 4790.037 kb on + strand at 4790.038 kb on - strand, within Echvi_3993 at 4790.100 kb on - strand at 4790.103 kb on + strand at 4790.133 kb on - strand at 4790.167 kb on + strand at 4790.168 kb on - strand at 4790.168 kb on - strand at 4790.177 kb on + strand at 4790.183 kb on + strand at 4790.184 kb on - strand at 4790.184 kb on - strand at 4790.243 kb on + strand, within Echvi_3994 at 4790.325 kb on + strand, within Echvi_3994
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.01 mg/ml remove 4,787,489 + Echvi_3991 0.35 -0.0 4,787,512 + Echvi_3991 0.37 +0.4 4,787,513 - Echvi_3991 0.37 -0.7 4,787,701 + Echvi_3991 0.50 +0.7 4,787,701 + Echvi_3991 0.50 -0.0 4,787,702 - Echvi_3991 0.50 +2.5 4,787,770 + Echvi_3991 0.55 -0.1 4,787,807 + Echvi_3991 0.57 -0.5 4,787,823 - Echvi_3991 0.58 -0.2 4,787,823 - Echvi_3991 0.58 -1.3 4,787,896 + Echvi_3991 0.64 +1.2 4,787,897 - Echvi_3991 0.64 -1.3 4,787,897 - Echvi_3991 0.64 -0.3 4,787,898 + Echvi_3991 0.64 +0.2 4,787,898 + Echvi_3991 0.64 +0.2 4,787,898 + Echvi_3991 0.64 -0.1 4,787,898 + Echvi_3991 0.64 -0.2 4,787,898 + Echvi_3991 0.64 -0.9 4,787,899 - Echvi_3991 0.64 -0.7 4,787,899 - Echvi_3991 0.64 -0.6 4,787,899 - Echvi_3991 0.64 +1.1 4,787,899 - Echvi_3991 0.64 -0.4 4,787,899 - Echvi_3991 0.64 +0.1 4,787,943 - Echvi_3991 0.67 +0.0 4,787,963 - Echvi_3991 0.68 -0.2 4,787,963 - Echvi_3991 0.68 +0.4 4,787,963 - Echvi_3991 0.68 +0.0 4,787,963 - Echvi_3991 0.68 -0.5 4,787,968 + +1.5 4,787,968 + Echvi_3991 0.69 +0.4 4,787,968 + Echvi_3991 0.69 +0.2 4,787,969 - Echvi_3991 0.69 -0.6 4,787,969 - Echvi_3991 0.69 -1.5 4,787,985 + Echvi_3991 0.70 +0.4 4,787,985 + Echvi_3991 0.70 +0.3 4,787,986 - Echvi_3991 0.70 +1.2 4,787,989 + Echvi_3991 0.70 +0.4 4,788,031 + Echvi_3991 0.73 +0.0 4,788,031 + Echvi_3991 0.73 -0.6 4,788,031 + Echvi_3991 0.73 +0.0 4,788,032 - Echvi_3991 0.73 +0.9 4,788,061 + Echvi_3991 0.75 -1.0 4,788,061 + Echvi_3991 0.75 -0.1 4,788,061 + Echvi_3991 0.75 +0.2 4,788,062 - Echvi_3991 0.75 -0.6 4,788,062 - Echvi_3991 0.75 -0.3 4,788,065 + Echvi_3991 0.75 -0.4 4,788,065 + Echvi_3991 0.75 -0.1 4,788,065 + Echvi_3991 0.75 -0.2 4,788,066 - Echvi_3991 0.76 -0.6 4,788,066 - Echvi_3991 0.76 +0.1 4,788,066 - Echvi_3991 0.76 -0.7 4,788,200 - Echvi_3991 0.85 -0.5 4,788,200 - Echvi_3991 0.85 +0.1 4,788,246 - Echvi_3991 0.88 +0.5 4,788,286 + +0.8 4,788,287 - -1.0 4,788,296 - +0.7 4,788,296 - -0.3 4,788,296 - +1.2 4,788,315 - -1.4 4,788,315 - -0.4 4,788,315 - +1.7 4,788,315 - -0.7 4,788,396 + -0.9 4,788,397 - -2.1 4,788,397 - +0.3 4,788,409 + -1.1 4,788,430 - +0.4 4,788,467 + -0.0 4,788,543 + Echvi_3992 0.12 +0.2 4,788,635 + Echvi_3992 0.21 -0.6 4,788,640 + Echvi_3992 0.22 -0.9 4,788,670 + Echvi_3992 0.25 +0.2 4,788,670 + Echvi_3992 0.25 -0.9 4,788,671 - Echvi_3992 0.25 +0.1 4,788,676 - Echvi_3992 0.26 +0.3 4,788,676 - +0.7 4,788,679 + Echvi_3992 0.26 -0.2 4,788,679 + Echvi_3992 0.26 -0.2 4,788,680 - Echvi_3992 0.26 +0.5 4,788,680 - Echvi_3992 0.26 -0.3 4,788,680 - Echvi_3992 0.26 +0.8 4,788,686 - Echvi_3992 0.27 -1.5 4,788,689 + Echvi_3992 0.27 +0.1 4,788,689 + Echvi_3992 0.27 +0.3 4,788,690 - Echvi_3992 0.27 -1.2 4,788,690 - Echvi_3992 0.27 -0.7 4,788,762 - Echvi_3992 0.34 -0.9 4,788,814 + Echvi_3992 0.40 -0.3 4,788,839 + Echvi_3992 0.42 +0.5 4,788,899 + Echvi_3992 0.48 -0.3 4,788,900 - Echvi_3992 0.49 -0.5 4,788,900 - Echvi_3992 0.49 -1.0 4,788,921 - Echvi_3992 0.51 -0.2 4,788,946 + Echvi_3992 0.53 +1.3 4,788,947 - Echvi_3992 0.53 -0.8 4,788,955 - Echvi_3992 0.54 +0.7 4,788,955 - Echvi_3992 0.54 -3.2 4,788,955 - Echvi_3992 0.54 -0.2 4,788,955 - Echvi_3992 0.54 +0.2 4,788,966 - Echvi_3992 0.55 +0.6 4,789,061 + Echvi_3992 0.65 -0.8 4,789,061 + Echvi_3992 0.65 -0.0 4,789,061 + Echvi_3992 0.65 -0.3 4,789,062 - Echvi_3992 0.65 +0.0 4,789,110 + Echvi_3992 0.70 -0.8 4,789,111 - Echvi_3992 0.70 -0.7 4,789,142 + Echvi_3992 0.73 +0.3 4,789,142 + Echvi_3992 0.73 -1.6 4,789,143 - Echvi_3992 0.73 +0.1 4,789,143 - Echvi_3992 0.73 -0.3 4,789,143 - Echvi_3992 0.73 -0.3 4,789,174 - Echvi_3992 0.77 -0.2 4,789,258 + Echvi_3992 0.85 +0.6 4,789,259 - Echvi_3992 0.85 -1.5 4,789,264 + Echvi_3992 0.86 -0.7 4,789,366 + +1.0 4,789,437 + -0.4 4,789,437 + -1.2 4,789,500 - Echvi_3993 0.13 +0.1 4,789,502 - Echvi_3993 0.13 +1.0 4,789,575 + Echvi_3993 0.23 +0.6 4,789,575 + Echvi_3993 0.23 -0.3 4,789,575 + Echvi_3993 0.23 -0.5 4,789,575 + Echvi_3993 0.23 +0.2 4,789,575 + Echvi_3993 0.23 +1.0 4,789,576 - Echvi_3993 0.23 +0.4 4,789,768 + Echvi_3993 0.49 +2.2 4,789,876 + Echvi_3993 0.64 -0.7 4,789,877 - Echvi_3993 0.64 -0.5 4,789,936 - Echvi_3993 0.72 +0.5 4,789,952 + Echvi_3993 0.74 -0.2 4,789,999 - Echvi_3993 0.80 +0.2 4,790,037 + +4.2 4,790,038 - Echvi_3993 0.85 +0.0 4,790,100 - -0.3 4,790,103 + -0.5 4,790,133 - -1.0 4,790,167 + -1.3 4,790,168 - -0.6 4,790,168 - -0.9 4,790,177 + -1.5 4,790,183 + -0.8 4,790,184 - -0.6 4,790,184 - -0.3 4,790,243 + Echvi_3994 0.12 +0.2 4,790,325 + Echvi_3994 0.22 -0.1
Or see this region's nucleotide sequence