Experiment: m.b. Thallium(I) acetate 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2905 and Echvi_2906 are separated by 132 nucleotides Echvi_2906 and Echvi_2907 are separated by 616 nucleotides Echvi_2907 and Echvi_2908 are separated by 55 nucleotides
Echvi_2905: Echvi_2905 - PhoD-like phosphatase., at 3,479,879 to 3,482,485
_2905
Echvi_2906: Echvi_2906 - hypothetical protein, at 3,482,618 to 3,482,884
_2906
Echvi_2907: Echvi_2907 - tRNA, at 3,483,501 to 3,483,577
_2907
Echvi_2908: Echvi_2908 - succinyl-CoA synthetase, beta subunit, at 3,483,633 to 3,484,850
_2908
Position (kb)
3482
3483 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3481.638 kb on - strand, within Echvi_2905 at 3481.638 kb on - strand, within Echvi_2905 at 3481.643 kb on - strand, within Echvi_2905 at 3481.668 kb on - strand, within Echvi_2905 at 3481.695 kb on - strand, within Echvi_2905 at 3481.695 kb on - strand, within Echvi_2905 at 3481.697 kb on + strand, within Echvi_2905 at 3481.698 kb on - strand, within Echvi_2905 at 3481.705 kb on + strand, within Echvi_2905 at 3481.705 kb on + strand, within Echvi_2905 at 3481.706 kb on - strand, within Echvi_2905 at 3481.710 kb on - strand, within Echvi_2905 at 3481.710 kb on - strand, within Echvi_2905 at 3481.710 kb on - strand, within Echvi_2905 at 3481.710 kb on - strand, within Echvi_2905 at 3481.710 kb on - strand, within Echvi_2905 at 3481.716 kb on + strand, within Echvi_2905 at 3481.716 kb on + strand, within Echvi_2905 at 3481.716 kb on + strand, within Echvi_2905 at 3481.717 kb on - strand, within Echvi_2905 at 3481.717 kb on - strand, within Echvi_2905 at 3481.740 kb on + strand, within Echvi_2905 at 3481.763 kb on + strand, within Echvi_2905 at 3481.763 kb on + strand, within Echvi_2905 at 3481.798 kb on + strand at 3481.869 kb on - strand, within Echvi_2905 at 3481.941 kb on - strand, within Echvi_2905 at 3481.941 kb on - strand, within Echvi_2905 at 3481.970 kb on + strand, within Echvi_2905 at 3481.997 kb on + strand, within Echvi_2905 at 3482.259 kb on - strand at 3482.338 kb on + strand at 3482.487 kb on + strand at 3482.670 kb on + strand, within Echvi_2906 at 3482.675 kb on - strand, within Echvi_2906 at 3482.694 kb on + strand, within Echvi_2906 at 3482.710 kb on + strand, within Echvi_2906 at 3482.710 kb on + strand, within Echvi_2906 at 3482.719 kb on + strand, within Echvi_2906 at 3482.720 kb on - strand, within Echvi_2906 at 3482.720 kb on - strand at 3482.720 kb on - strand, within Echvi_2906 at 3482.753 kb on + strand, within Echvi_2906 at 3482.774 kb on + strand, within Echvi_2906 at 3482.774 kb on + strand, within Echvi_2906 at 3482.779 kb on + strand, within Echvi_2906 at 3482.779 kb on + strand, within Echvi_2906 at 3482.779 kb on + strand, within Echvi_2906 at 3482.779 kb on + strand, within Echvi_2906 at 3482.780 kb on - strand, within Echvi_2906 at 3482.780 kb on - strand, within Echvi_2906 at 3482.780 kb on - strand, within Echvi_2906 at 3482.901 kb on + strand at 3482.990 kb on + strand at 3483.029 kb on - strand at 3483.029 kb on - strand at 3483.077 kb on + strand at 3483.092 kb on - strand at 3483.092 kb on - strand at 3483.092 kb on - strand at 3483.182 kb on - strand at 3483.223 kb on + strand at 3483.239 kb on - strand at 3483.243 kb on - strand at 3483.440 kb on + strand at 3483.441 kb on - strand at 3483.622 kb on - strand at 3483.622 kb on - strand at 3483.622 kb on - strand at 3483.684 kb on + strand at 3483.794 kb on + strand, within Echvi_2908 at 3483.805 kb on - strand, within Echvi_2908 at 3483.834 kb on - strand, within Echvi_2908 at 3483.871 kb on - strand, within Echvi_2908
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.01 mg/ml remove 3,481,638 - Echvi_2905 0.67 -0.7 3,481,638 - Echvi_2905 0.67 -0.4 3,481,643 - Echvi_2905 0.68 -0.5 3,481,668 - Echvi_2905 0.69 -0.1 3,481,695 - Echvi_2905 0.70 +0.3 3,481,695 - Echvi_2905 0.70 +0.2 3,481,697 + Echvi_2905 0.70 -0.4 3,481,698 - Echvi_2905 0.70 +0.3 3,481,705 + Echvi_2905 0.70 +0.2 3,481,705 + Echvi_2905 0.70 -0.2 3,481,706 - Echvi_2905 0.70 -0.3 3,481,710 - Echvi_2905 0.70 +0.2 3,481,710 - Echvi_2905 0.70 -0.5 3,481,710 - Echvi_2905 0.70 +0.3 3,481,710 - Echvi_2905 0.70 +3.2 3,481,710 - Echvi_2905 0.70 -0.8 3,481,716 + Echvi_2905 0.70 -0.8 3,481,716 + Echvi_2905 0.70 -0.0 3,481,716 + Echvi_2905 0.70 +0.2 3,481,717 - Echvi_2905 0.71 +0.2 3,481,717 - Echvi_2905 0.71 -0.2 3,481,740 + Echvi_2905 0.71 -0.5 3,481,763 + Echvi_2905 0.72 +0.9 3,481,763 + Echvi_2905 0.72 -0.1 3,481,798 + +2.2 3,481,869 - Echvi_2905 0.76 -1.5 3,481,941 - Echvi_2905 0.79 -1.1 3,481,941 - Echvi_2905 0.79 +0.9 3,481,970 + Echvi_2905 0.80 +0.1 3,481,997 + Echvi_2905 0.81 -0.6 3,482,259 - -0.4 3,482,338 + +0.5 3,482,487 + +0.1 3,482,670 + Echvi_2906 0.19 +0.7 3,482,675 - Echvi_2906 0.21 -1.0 3,482,694 + Echvi_2906 0.28 -0.1 3,482,710 + Echvi_2906 0.34 -0.8 3,482,710 + Echvi_2906 0.34 -0.9 3,482,719 + Echvi_2906 0.38 -0.5 3,482,720 - Echvi_2906 0.38 -0.1 3,482,720 - +1.6 3,482,720 - Echvi_2906 0.38 -0.6 3,482,753 + Echvi_2906 0.51 -0.5 3,482,774 + Echvi_2906 0.58 -0.2 3,482,774 + Echvi_2906 0.58 +1.0 3,482,779 + Echvi_2906 0.60 -1.6 3,482,779 + Echvi_2906 0.60 -0.4 3,482,779 + Echvi_2906 0.60 -2.6 3,482,779 + Echvi_2906 0.60 -1.1 3,482,780 - Echvi_2906 0.61 +0.1 3,482,780 - Echvi_2906 0.61 -1.7 3,482,780 - Echvi_2906 0.61 -0.4 3,482,901 + -0.5 3,482,990 + -0.7 3,483,029 - +0.3 3,483,029 - -0.6 3,483,077 + +0.1 3,483,092 - -0.1 3,483,092 - +0.1 3,483,092 - +0.2 3,483,182 - -0.2 3,483,223 + +0.7 3,483,239 - +0.1 3,483,243 - +0.1 3,483,440 + -0.9 3,483,441 - -0.4 3,483,622 - -1.5 3,483,622 - -0.2 3,483,622 - -0.3 3,483,684 + +0.6 3,483,794 + Echvi_2908 0.13 -0.5 3,483,805 - Echvi_2908 0.14 +0.8 3,483,834 - Echvi_2908 0.17 -0.1 3,483,871 - Echvi_2908 0.20 -1.1
Or see this region's nucleotide sequence