Experiment: m.b. Thallium(I) acetate 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2782 and Echvi_2783 are separated by 264 nucleotides Echvi_2783 and Echvi_2784 are separated by 82 nucleotides Echvi_2784 and Echvi_2785 are separated by 174 nucleotides
Echvi_2782: Echvi_2782 - RND family efflux transporter, MFP subunit, at 3,325,323 to 3,326,477
_2782
Echvi_2783: Echvi_2783 - signal peptide peptidase SppA, 67K type, at 3,326,742 to 3,328,499
_2783
Echvi_2784: Echvi_2784 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, at 3,328,582 to 3,329,058
_2784
Echvi_2785: Echvi_2785 - putative efflux protein, MATE family, at 3,329,233 to 3,330,624
_2785
Position (kb)
3326
3327
3328
3329 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3325.770 kb on + strand, within Echvi_2782 at 3325.771 kb on - strand, within Echvi_2782 at 3325.771 kb on - strand, within Echvi_2782 at 3325.771 kb on - strand, within Echvi_2782 at 3325.772 kb on + strand, within Echvi_2782 at 3325.773 kb on - strand, within Echvi_2782 at 3325.773 kb on - strand, within Echvi_2782 at 3325.804 kb on + strand, within Echvi_2782 at 3325.804 kb on + strand, within Echvi_2782 at 3325.805 kb on - strand, within Echvi_2782 at 3325.813 kb on + strand, within Echvi_2782 at 3325.814 kb on - strand, within Echvi_2782 at 3325.814 kb on - strand, within Echvi_2782 at 3325.827 kb on + strand, within Echvi_2782 at 3325.827 kb on + strand, within Echvi_2782 at 3325.827 kb on + strand, within Echvi_2782 at 3325.832 kb on + strand, within Echvi_2782 at 3325.837 kb on + strand, within Echvi_2782 at 3325.837 kb on + strand, within Echvi_2782 at 3325.838 kb on - strand, within Echvi_2782 at 3325.838 kb on - strand, within Echvi_2782 at 3325.845 kb on + strand, within Echvi_2782 at 3325.845 kb on + strand, within Echvi_2782 at 3325.845 kb on + strand, within Echvi_2782 at 3325.845 kb on + strand, within Echvi_2782 at 3325.845 kb on + strand, within Echvi_2782 at 3325.845 kb on + strand, within Echvi_2782 at 3325.845 kb on + strand, within Echvi_2782 at 3325.845 kb on + strand, within Echvi_2782 at 3325.846 kb on - strand, within Echvi_2782 at 3325.846 kb on - strand, within Echvi_2782 at 3325.898 kb on + strand, within Echvi_2782 at 3325.902 kb on + strand, within Echvi_2782 at 3325.902 kb on + strand, within Echvi_2782 at 3325.902 kb on + strand, within Echvi_2782 at 3325.903 kb on - strand, within Echvi_2782 at 3325.907 kb on + strand, within Echvi_2782 at 3325.907 kb on + strand, within Echvi_2782 at 3325.915 kb on - strand, within Echvi_2782 at 3325.919 kb on + strand, within Echvi_2782 at 3325.923 kb on + strand, within Echvi_2782 at 3325.923 kb on + strand, within Echvi_2782 at 3325.924 kb on - strand, within Echvi_2782 at 3325.924 kb on - strand, within Echvi_2782 at 3325.927 kb on - strand, within Echvi_2782 at 3325.985 kb on - strand, within Echvi_2782 at 3326.047 kb on - strand, within Echvi_2782 at 3326.072 kb on + strand, within Echvi_2782 at 3326.093 kb on + strand, within Echvi_2782 at 3326.093 kb on + strand, within Echvi_2782 at 3326.093 kb on + strand, within Echvi_2782 at 3326.094 kb on - strand, within Echvi_2782 at 3326.094 kb on - strand, within Echvi_2782 at 3326.097 kb on + strand, within Echvi_2782 at 3326.098 kb on - strand, within Echvi_2782 at 3326.104 kb on + strand, within Echvi_2782 at 3326.218 kb on + strand, within Echvi_2782 at 3326.219 kb on - strand, within Echvi_2782 at 3326.223 kb on - strand, within Echvi_2782 at 3326.223 kb on - strand, within Echvi_2782 at 3326.238 kb on + strand, within Echvi_2782 at 3326.304 kb on + strand, within Echvi_2782 at 3326.305 kb on - strand, within Echvi_2782 at 3326.308 kb on + strand, within Echvi_2782 at 3326.309 kb on - strand, within Echvi_2782 at 3326.309 kb on - strand, within Echvi_2782 at 3326.309 kb on - strand, within Echvi_2782 at 3326.340 kb on + strand, within Echvi_2782 at 3326.340 kb on + strand, within Echvi_2782 at 3326.341 kb on - strand, within Echvi_2782 at 3326.414 kb on - strand at 3326.436 kb on + strand at 3326.437 kb on - strand at 3326.437 kb on - strand at 3326.485 kb on + strand at 3326.505 kb on - strand at 3326.517 kb on - strand at 3326.644 kb on + strand at 3326.645 kb on - strand at 3326.851 kb on + strand at 3327.183 kb on - strand, within Echvi_2783 at 3327.335 kb on + strand, within Echvi_2783 at 3327.337 kb on + strand, within Echvi_2783 at 3327.337 kb on + strand, within Echvi_2783 at 3327.337 kb on + strand, within Echvi_2783 at 3327.338 kb on - strand, within Echvi_2783 at 3327.338 kb on - strand, within Echvi_2783 at 3327.338 kb on - strand, within Echvi_2783 at 3327.338 kb on - strand, within Echvi_2783 at 3327.338 kb on - strand, within Echvi_2783 at 3327.338 kb on - strand, within Echvi_2783 at 3327.340 kb on + strand, within Echvi_2783 at 3327.340 kb on + strand, within Echvi_2783 at 3327.341 kb on - strand, within Echvi_2783 at 3327.341 kb on - strand, within Echvi_2783 at 3327.626 kb on + strand, within Echvi_2783 at 3327.841 kb on + strand, within Echvi_2783 at 3327.842 kb on - strand, within Echvi_2783 at 3327.842 kb on - strand, within Echvi_2783 at 3327.842 kb on - strand, within Echvi_2783 at 3327.908 kb on + strand, within Echvi_2783 at 3327.944 kb on + strand, within Echvi_2783 at 3328.093 kb on - strand, within Echvi_2783 at 3328.201 kb on + strand, within Echvi_2783 at 3328.201 kb on + strand, within Echvi_2783 at 3328.202 kb on - strand, within Echvi_2783 at 3328.202 kb on - strand, within Echvi_2783 at 3328.203 kb on + strand, within Echvi_2783 at 3328.203 kb on + strand, within Echvi_2783 at 3328.204 kb on - strand, within Echvi_2783 at 3328.204 kb on - strand, within Echvi_2783 at 3328.204 kb on - strand, within Echvi_2783 at 3328.215 kb on - strand, within Echvi_2783 at 3328.215 kb on - strand, within Echvi_2783 at 3328.271 kb on + strand, within Echvi_2783 at 3328.311 kb on - strand, within Echvi_2783 at 3328.371 kb on - strand at 3328.485 kb on - strand at 3328.504 kb on + strand at 3328.504 kb on + strand at 3328.543 kb on + strand at 3328.547 kb on + strand at 3328.581 kb on + strand at 3328.581 kb on + strand at 3328.581 kb on + strand at 3328.592 kb on + strand at 3328.592 kb on + strand at 3328.593 kb on - strand at 3329.048 kb on + strand at 3329.048 kb on + strand at 3329.056 kb on + strand at 3329.090 kb on + strand at 3329.091 kb on - strand at 3329.099 kb on + strand at 3329.172 kb on - strand at 3329.186 kb on - strand at 3329.186 kb on - strand at 3329.217 kb on - strand at 3329.217 kb on - strand at 3329.218 kb on + strand at 3329.228 kb on + strand at 3329.229 kb on - strand at 3329.232 kb on + strand at 3329.233 kb on - strand at 3329.250 kb on + strand at 3329.250 kb on + strand at 3329.250 kb on + strand at 3329.250 kb on + strand at 3329.296 kb on - strand at 3329.307 kb on + strand at 3329.326 kb on + strand at 3329.326 kb on + strand at 3329.327 kb on - strand at 3329.381 kb on + strand, within Echvi_2785 at 3329.381 kb on + strand, within Echvi_2785 at 3329.382 kb on - strand, within Echvi_2785 at 3329.396 kb on + strand, within Echvi_2785 at 3329.400 kb on + strand, within Echvi_2785
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.01 mg/ml remove 3,325,770 + Echvi_2782 0.39 +0.1 3,325,771 - Echvi_2782 0.39 +0.1 3,325,771 - Echvi_2782 0.39 -0.1 3,325,771 - Echvi_2782 0.39 -0.0 3,325,772 + Echvi_2782 0.39 -0.1 3,325,773 - Echvi_2782 0.39 -1.4 3,325,773 - Echvi_2782 0.39 -0.2 3,325,804 + Echvi_2782 0.42 -0.2 3,325,804 + Echvi_2782 0.42 -0.7 3,325,805 - Echvi_2782 0.42 +0.5 3,325,813 + Echvi_2782 0.42 -2.3 3,325,814 - Echvi_2782 0.43 -0.0 3,325,814 - Echvi_2782 0.43 +0.4 3,325,827 + Echvi_2782 0.44 -0.0 3,325,827 + Echvi_2782 0.44 -2.3 3,325,827 + Echvi_2782 0.44 -0.1 3,325,832 + Echvi_2782 0.44 +0.5 3,325,837 + Echvi_2782 0.45 +0.7 3,325,837 + Echvi_2782 0.45 +0.7 3,325,838 - Echvi_2782 0.45 +0.5 3,325,838 - Echvi_2782 0.45 -0.3 3,325,845 + Echvi_2782 0.45 -0.4 3,325,845 + Echvi_2782 0.45 -0.5 3,325,845 + Echvi_2782 0.45 -1.2 3,325,845 + Echvi_2782 0.45 +0.7 3,325,845 + Echvi_2782 0.45 -0.1 3,325,845 + Echvi_2782 0.45 +0.7 3,325,845 + Echvi_2782 0.45 +0.0 3,325,845 + Echvi_2782 0.45 -0.1 3,325,846 - Echvi_2782 0.45 -0.5 3,325,846 - Echvi_2782 0.45 +1.1 3,325,898 + Echvi_2782 0.50 -1.3 3,325,902 + Echvi_2782 0.50 -0.6 3,325,902 + Echvi_2782 0.50 -0.0 3,325,902 + Echvi_2782 0.50 -0.7 3,325,903 - Echvi_2782 0.50 -0.2 3,325,907 + Echvi_2782 0.51 +0.1 3,325,907 + Echvi_2782 0.51 -0.1 3,325,915 - Echvi_2782 0.51 -0.5 3,325,919 + Echvi_2782 0.52 -1.2 3,325,923 + Echvi_2782 0.52 +0.1 3,325,923 + Echvi_2782 0.52 +0.2 3,325,924 - Echvi_2782 0.52 -0.2 3,325,924 - Echvi_2782 0.52 -1.1 3,325,927 - Echvi_2782 0.52 -0.1 3,325,985 - Echvi_2782 0.57 +0.2 3,326,047 - Echvi_2782 0.63 +0.2 3,326,072 + Echvi_2782 0.65 +0.1 3,326,093 + Echvi_2782 0.67 +0.6 3,326,093 + Echvi_2782 0.67 +0.8 3,326,093 + Echvi_2782 0.67 +0.2 3,326,094 - Echvi_2782 0.67 -0.9 3,326,094 - Echvi_2782 0.67 -0.3 3,326,097 + Echvi_2782 0.67 +1.0 3,326,098 - Echvi_2782 0.67 +0.0 3,326,104 + Echvi_2782 0.68 +0.8 3,326,218 + Echvi_2782 0.77 +0.0 3,326,219 - Echvi_2782 0.78 +0.4 3,326,223 - Echvi_2782 0.78 -0.8 3,326,223 - Echvi_2782 0.78 -0.1 3,326,238 + Echvi_2782 0.79 +0.4 3,326,304 + Echvi_2782 0.85 +0.5 3,326,305 - Echvi_2782 0.85 +0.9 3,326,308 + Echvi_2782 0.85 +0.1 3,326,309 - Echvi_2782 0.85 +0.2 3,326,309 - Echvi_2782 0.85 -0.2 3,326,309 - Echvi_2782 0.85 -0.4 3,326,340 + Echvi_2782 0.88 -0.9 3,326,340 + Echvi_2782 0.88 +0.2 3,326,341 - Echvi_2782 0.88 -3.2 3,326,414 - -0.7 3,326,436 + +1.2 3,326,437 - -0.9 3,326,437 - +0.4 3,326,485 + -0.3 3,326,505 - +0.3 3,326,517 - +1.0 3,326,644 + +0.8 3,326,645 - -0.9 3,326,851 + +0.3 3,327,183 - Echvi_2783 0.25 -2.1 3,327,335 + Echvi_2783 0.34 +0.9 3,327,337 + Echvi_2783 0.34 +1.2 3,327,337 + Echvi_2783 0.34 -0.7 3,327,337 + Echvi_2783 0.34 +0.4 3,327,338 - Echvi_2783 0.34 -0.5 3,327,338 - Echvi_2783 0.34 +0.2 3,327,338 - Echvi_2783 0.34 -1.2 3,327,338 - Echvi_2783 0.34 -1.2 3,327,338 - Echvi_2783 0.34 -1.7 3,327,338 - Echvi_2783 0.34 -0.1 3,327,340 + Echvi_2783 0.34 -0.6 3,327,340 + Echvi_2783 0.34 -0.6 3,327,341 - Echvi_2783 0.34 -0.9 3,327,341 - Echvi_2783 0.34 +1.8 3,327,626 + Echvi_2783 0.50 -0.2 3,327,841 + Echvi_2783 0.63 -0.3 3,327,842 - Echvi_2783 0.63 -2.9 3,327,842 - Echvi_2783 0.63 -0.4 3,327,842 - Echvi_2783 0.63 +0.3 3,327,908 + Echvi_2783 0.66 -0.2 3,327,944 + Echvi_2783 0.68 -1.4 3,328,093 - Echvi_2783 0.77 -0.8 3,328,201 + Echvi_2783 0.83 -0.2 3,328,201 + Echvi_2783 0.83 +0.3 3,328,202 - Echvi_2783 0.83 -1.6 3,328,202 - Echvi_2783 0.83 +0.8 3,328,203 + Echvi_2783 0.83 -1.2 3,328,203 + Echvi_2783 0.83 -1.2 3,328,204 - Echvi_2783 0.83 -0.6 3,328,204 - Echvi_2783 0.83 -1.2 3,328,204 - Echvi_2783 0.83 +0.1 3,328,215 - Echvi_2783 0.84 -0.7 3,328,215 - Echvi_2783 0.84 +1.1 3,328,271 + Echvi_2783 0.87 +0.9 3,328,311 - Echvi_2783 0.89 -0.7 3,328,371 - -2.4 3,328,485 - -0.7 3,328,504 + +0.3 3,328,504 + +0.2 3,328,543 + +0.9 3,328,547 + -1.0 3,328,581 + -0.2 3,328,581 + -1.5 3,328,581 + -0.2 3,328,592 + +0.3 3,328,592 + +0.5 3,328,593 - -0.3 3,329,048 + -0.7 3,329,048 + -0.6 3,329,056 + -0.4 3,329,090 + -1.4 3,329,091 - -0.7 3,329,099 + +0.1 3,329,172 - -1.0 3,329,186 - -0.2 3,329,186 - +0.5 3,329,217 - -0.4 3,329,217 - -0.2 3,329,218 + -0.4 3,329,228 + +1.3 3,329,229 - -0.9 3,329,232 + -0.8 3,329,233 - -0.2 3,329,250 + +1.0 3,329,250 + -0.8 3,329,250 + +0.2 3,329,250 + -0.4 3,329,296 - +0.1 3,329,307 + +0.0 3,329,326 + +0.3 3,329,326 + -0.4 3,329,327 - -0.9 3,329,381 + Echvi_2785 0.11 -0.5 3,329,381 + Echvi_2785 0.11 +0.2 3,329,382 - Echvi_2785 0.11 -0.0 3,329,396 + Echvi_2785 0.12 -0.5 3,329,400 + Echvi_2785 0.12 -0.5
Or see this region's nucleotide sequence