Experiment: m.b. Thallium(I) acetate 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2421 and Echvi_2422 overlap by 11 nucleotides Echvi_2422 and Echvi_2423 are separated by 226 nucleotides Echvi_2423 and Echvi_2424 are separated by 53 nucleotides
Echvi_2421: Echvi_2421 - Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase., at 2,872,267 to 2,873,610
_2421
Echvi_2422: Echvi_2422 - Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 2,873,600 to 2,874,982
_2422
Echvi_2423: Echvi_2423 - FKBP-type peptidyl-prolyl cis-trans isomerases 2, at 2,875,209 to 2,875,637
_2423
Echvi_2424: Echvi_2424 - hypothetical protein, at 2,875,691 to 2,876,167
_2424
Position (kb)
2873
2874
2875 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2872.618 kb on + strand, within Echvi_2421 at 2872.619 kb on - strand, within Echvi_2421 at 2872.638 kb on + strand, within Echvi_2421 at 2872.638 kb on + strand, within Echvi_2421 at 2872.643 kb on + strand, within Echvi_2421 at 2872.644 kb on - strand, within Echvi_2421 at 2872.754 kb on - strand, within Echvi_2421 at 2872.754 kb on - strand, within Echvi_2421 at 2872.754 kb on - strand, within Echvi_2421 at 2872.766 kb on - strand, within Echvi_2421 at 2872.863 kb on + strand, within Echvi_2421 at 2872.864 kb on - strand, within Echvi_2421 at 2872.864 kb on - strand, within Echvi_2421 at 2872.873 kb on + strand, within Echvi_2421 at 2872.873 kb on + strand, within Echvi_2421 at 2872.874 kb on - strand, within Echvi_2421 at 2872.874 kb on - strand, within Echvi_2421 at 2873.023 kb on + strand, within Echvi_2421 at 2873.027 kb on - strand, within Echvi_2421 at 2873.058 kb on + strand, within Echvi_2421 at 2873.058 kb on + strand, within Echvi_2421 at 2873.059 kb on - strand, within Echvi_2421 at 2873.059 kb on - strand, within Echvi_2421 at 2873.183 kb on - strand, within Echvi_2421 at 2873.400 kb on - strand, within Echvi_2421 at 2873.443 kb on - strand, within Echvi_2421 at 2873.552 kb on - strand at 2873.553 kb on + strand at 2873.553 kb on + strand at 2873.689 kb on + strand at 2873.690 kb on - strand at 2873.840 kb on + strand, within Echvi_2422 at 2873.878 kb on + strand, within Echvi_2422 at 2873.935 kb on - strand, within Echvi_2422 at 2873.948 kb on + strand, within Echvi_2422 at 2873.949 kb on - strand, within Echvi_2422 at 2873.949 kb on - strand, within Echvi_2422 at 2873.949 kb on - strand, within Echvi_2422 at 2873.978 kb on + strand, within Echvi_2422 at 2873.978 kb on + strand, within Echvi_2422 at 2873.978 kb on + strand, within Echvi_2422 at 2873.979 kb on - strand, within Echvi_2422 at 2873.979 kb on - strand, within Echvi_2422 at 2873.979 kb on - strand, within Echvi_2422 at 2873.979 kb on - strand, within Echvi_2422 at 2873.981 kb on - strand, within Echvi_2422 at 2874.020 kb on + strand, within Echvi_2422 at 2874.042 kb on - strand, within Echvi_2422 at 2874.130 kb on + strand, within Echvi_2422 at 2874.173 kb on - strand, within Echvi_2422 at 2874.173 kb on - strand, within Echvi_2422 at 2874.347 kb on + strand, within Echvi_2422 at 2874.359 kb on + strand, within Echvi_2422 at 2874.434 kb on + strand, within Echvi_2422 at 2874.434 kb on + strand, within Echvi_2422 at 2874.568 kb on + strand, within Echvi_2422 at 2874.568 kb on + strand, within Echvi_2422 at 2874.585 kb on + strand, within Echvi_2422 at 2874.585 kb on + strand, within Echvi_2422 at 2874.595 kb on + strand, within Echvi_2422 at 2874.595 kb on + strand, within Echvi_2422 at 2874.614 kb on + strand, within Echvi_2422 at 2874.650 kb on + strand, within Echvi_2422 at 2874.651 kb on - strand, within Echvi_2422 at 2874.698 kb on + strand, within Echvi_2422 at 2874.819 kb on - strand, within Echvi_2422 at 2874.881 kb on - strand at 2874.884 kb on + strand at 2874.885 kb on - strand at 2874.893 kb on - strand at 2874.957 kb on - strand at 2875.173 kb on + strand at 2875.203 kb on + strand at 2875.206 kb on + strand at 2875.206 kb on + strand at 2875.216 kb on + strand at 2875.237 kb on + strand at 2875.256 kb on + strand, within Echvi_2423 at 2875.319 kb on - strand, within Echvi_2423 at 2875.382 kb on + strand, within Echvi_2423 at 2875.383 kb on - strand, within Echvi_2423 at 2875.413 kb on + strand, within Echvi_2423 at 2875.413 kb on + strand, within Echvi_2423 at 2875.413 kb on + strand, within Echvi_2423 at 2875.413 kb on + strand, within Echvi_2423 at 2875.414 kb on - strand, within Echvi_2423 at 2875.414 kb on - strand, within Echvi_2423 at 2875.414 kb on - strand, within Echvi_2423 at 2875.421 kb on + strand, within Echvi_2423 at 2875.433 kb on + strand, within Echvi_2423 at 2875.475 kb on + strand, within Echvi_2423 at 2875.476 kb on - strand, within Echvi_2423 at 2875.486 kb on + strand, within Echvi_2423 at 2875.487 kb on - strand, within Echvi_2423 at 2875.544 kb on - strand, within Echvi_2423 at 2875.606 kb on + strand at 2875.631 kb on - strand at 2875.631 kb on - strand at 2875.700 kb on + strand at 2875.705 kb on + strand at 2875.705 kb on + strand at 2875.779 kb on + strand, within Echvi_2424 at 2875.780 kb on - strand, within Echvi_2424 at 2875.780 kb on - strand, within Echvi_2424 at 2875.780 kb on - strand, within Echvi_2424 at 2875.795 kb on + strand, within Echvi_2424 at 2875.796 kb on - strand, within Echvi_2424 at 2875.801 kb on - strand, within Echvi_2424 at 2875.841 kb on - strand, within Echvi_2424
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.01 mg/ml remove 2,872,618 + Echvi_2421 0.26 +0.3 2,872,619 - Echvi_2421 0.26 -0.3 2,872,638 + Echvi_2421 0.28 -1.3 2,872,638 + Echvi_2421 0.28 -0.0 2,872,643 + Echvi_2421 0.28 +0.8 2,872,644 - Echvi_2421 0.28 +0.1 2,872,754 - Echvi_2421 0.36 +0.2 2,872,754 - Echvi_2421 0.36 -0.0 2,872,754 - Echvi_2421 0.36 +0.7 2,872,766 - Echvi_2421 0.37 +0.2 2,872,863 + Echvi_2421 0.44 +0.1 2,872,864 - Echvi_2421 0.44 +0.2 2,872,864 - Echvi_2421 0.44 +0.4 2,872,873 + Echvi_2421 0.45 -0.7 2,872,873 + Echvi_2421 0.45 +0.0 2,872,874 - Echvi_2421 0.45 +0.4 2,872,874 - Echvi_2421 0.45 +0.1 2,873,023 + Echvi_2421 0.56 -0.5 2,873,027 - Echvi_2421 0.57 +0.7 2,873,058 + Echvi_2421 0.59 -0.1 2,873,058 + Echvi_2421 0.59 -0.1 2,873,059 - Echvi_2421 0.59 -0.9 2,873,059 - Echvi_2421 0.59 +0.6 2,873,183 - Echvi_2421 0.68 -1.1 2,873,400 - Echvi_2421 0.84 -0.4 2,873,443 - Echvi_2421 0.88 -0.7 2,873,552 - -0.4 2,873,553 + -0.7 2,873,553 + +0.1 2,873,689 + +0.4 2,873,690 - +0.4 2,873,840 + Echvi_2422 0.17 -0.2 2,873,878 + Echvi_2422 0.20 -0.3 2,873,935 - Echvi_2422 0.24 +0.8 2,873,948 + Echvi_2422 0.25 +0.3 2,873,949 - Echvi_2422 0.25 +1.0 2,873,949 - Echvi_2422 0.25 -1.1 2,873,949 - Echvi_2422 0.25 -0.1 2,873,978 + Echvi_2422 0.27 -0.7 2,873,978 + Echvi_2422 0.27 -0.1 2,873,978 + Echvi_2422 0.27 +0.4 2,873,979 - Echvi_2422 0.27 +0.2 2,873,979 - Echvi_2422 0.27 +0.9 2,873,979 - Echvi_2422 0.27 +1.6 2,873,979 - Echvi_2422 0.27 +0.8 2,873,981 - Echvi_2422 0.28 +1.2 2,874,020 + Echvi_2422 0.30 +0.3 2,874,042 - Echvi_2422 0.32 +0.5 2,874,130 + Echvi_2422 0.38 +1.3 2,874,173 - Echvi_2422 0.41 +0.5 2,874,173 - Echvi_2422 0.41 +0.3 2,874,347 + Echvi_2422 0.54 +0.3 2,874,359 + Echvi_2422 0.55 -1.9 2,874,434 + Echvi_2422 0.60 -0.8 2,874,434 + Echvi_2422 0.60 +2.9 2,874,568 + Echvi_2422 0.70 +0.7 2,874,568 + Echvi_2422 0.70 -1.8 2,874,585 + Echvi_2422 0.71 +1.3 2,874,585 + Echvi_2422 0.71 +1.1 2,874,595 + Echvi_2422 0.72 +2.3 2,874,595 + Echvi_2422 0.72 +1.7 2,874,614 + Echvi_2422 0.73 -1.2 2,874,650 + Echvi_2422 0.76 +0.8 2,874,651 - Echvi_2422 0.76 -0.7 2,874,698 + Echvi_2422 0.79 +1.1 2,874,819 - Echvi_2422 0.88 +0.6 2,874,881 - +0.4 2,874,884 + -2.1 2,874,885 - +0.5 2,874,893 - +0.0 2,874,957 - +0.6 2,875,173 + -0.2 2,875,203 + -0.5 2,875,206 + -0.1 2,875,206 + -0.2 2,875,216 + -0.8 2,875,237 + +0.2 2,875,256 + Echvi_2423 0.11 -1.8 2,875,319 - Echvi_2423 0.26 -0.0 2,875,382 + Echvi_2423 0.40 +0.4 2,875,383 - Echvi_2423 0.41 +0.5 2,875,413 + Echvi_2423 0.48 -0.2 2,875,413 + Echvi_2423 0.48 +2.1 2,875,413 + Echvi_2423 0.48 +0.3 2,875,413 + Echvi_2423 0.48 -0.4 2,875,414 - Echvi_2423 0.48 -0.1 2,875,414 - Echvi_2423 0.48 +0.2 2,875,414 - Echvi_2423 0.48 +0.2 2,875,421 + Echvi_2423 0.49 -1.3 2,875,433 + Echvi_2423 0.52 +1.0 2,875,475 + Echvi_2423 0.62 +1.2 2,875,476 - Echvi_2423 0.62 -0.1 2,875,486 + Echvi_2423 0.65 +0.1 2,875,487 - Echvi_2423 0.65 -1.0 2,875,544 - Echvi_2423 0.78 +0.6 2,875,606 + +0.0 2,875,631 - -0.5 2,875,631 - +0.8 2,875,700 + -0.2 2,875,705 + -2.7 2,875,705 + -0.1 2,875,779 + Echvi_2424 0.18 +0.7 2,875,780 - Echvi_2424 0.19 +0.8 2,875,780 - Echvi_2424 0.19 +2.1 2,875,780 - Echvi_2424 0.19 -0.6 2,875,795 + Echvi_2424 0.22 +0.3 2,875,796 - Echvi_2424 0.22 -0.3 2,875,801 - Echvi_2424 0.23 -0.7 2,875,841 - Echvi_2424 0.31 -0.9
Or see this region's nucleotide sequence