Experiment: m.b. Thallium(I) acetate 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1636 and Echvi_1637 are separated by 59 nucleotides Echvi_1637 and Echvi_1638 are separated by 27 nucleotides Echvi_1638 and Echvi_1639 are separated by 109 nucleotides
Echvi_1636: Echvi_1636 - SusD family., at 1,892,243 to 1,894,111
_1636
Echvi_1637: Echvi_1637 - hypothetical protein, at 1,894,171 to 1,894,569
_1637
Echvi_1638: Echvi_1638 - hypothetical protein, at 1,894,597 to 1,894,743
_1638
Echvi_1639: Echvi_1639 - Endopolygalacturonase, at 1,894,853 to 1,896,220
_1639
Position (kb)
1894
1895 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1893.285 kb on - strand, within Echvi_1636 at 1893.285 kb on - strand, within Echvi_1636 at 1893.308 kb on - strand, within Echvi_1636 at 1893.311 kb on - strand, within Echvi_1636 at 1893.437 kb on + strand, within Echvi_1636 at 1893.437 kb on + strand, within Echvi_1636 at 1893.438 kb on - strand, within Echvi_1636 at 1893.438 kb on - strand, within Echvi_1636 at 1893.438 kb on - strand, within Echvi_1636 at 1893.438 kb on - strand, within Echvi_1636 at 1893.439 kb on + strand, within Echvi_1636 at 1893.446 kb on - strand, within Echvi_1636 at 1893.460 kb on + strand, within Echvi_1636 at 1893.461 kb on - strand, within Echvi_1636 at 1893.527 kb on + strand, within Echvi_1636 at 1893.528 kb on - strand, within Echvi_1636 at 1893.605 kb on + strand, within Echvi_1636 at 1893.605 kb on + strand, within Echvi_1636 at 1893.605 kb on + strand, within Echvi_1636 at 1893.605 kb on + strand, within Echvi_1636 at 1893.606 kb on - strand, within Echvi_1636 at 1893.627 kb on - strand, within Echvi_1636 at 1893.627 kb on - strand, within Echvi_1636 at 1893.627 kb on - strand, within Echvi_1636 at 1893.634 kb on + strand, within Echvi_1636 at 1893.662 kb on + strand, within Echvi_1636 at 1893.662 kb on + strand, within Echvi_1636 at 1893.662 kb on + strand, within Echvi_1636 at 1893.663 kb on - strand, within Echvi_1636 at 1893.664 kb on + strand, within Echvi_1636 at 1893.664 kb on + strand, within Echvi_1636 at 1893.665 kb on - strand, within Echvi_1636 at 1893.665 kb on - strand, within Echvi_1636 at 1893.746 kb on + strand, within Echvi_1636 at 1893.763 kb on + strand, within Echvi_1636 at 1893.764 kb on - strand, within Echvi_1636 at 1893.795 kb on + strand, within Echvi_1636 at 1893.809 kb on - strand, within Echvi_1636 at 1893.834 kb on - strand, within Echvi_1636 at 1893.846 kb on + strand, within Echvi_1636 at 1893.847 kb on - strand, within Echvi_1636 at 1893.863 kb on - strand, within Echvi_1636 at 1893.973 kb on + strand at 1893.974 kb on - strand at 1893.974 kb on - strand at 1893.994 kb on + strand at 1894.009 kb on + strand at 1894.107 kb on - strand at 1894.109 kb on + strand at 1894.204 kb on - strand at 1894.246 kb on - strand, within Echvi_1637 at 1894.319 kb on - strand, within Echvi_1637 at 1894.362 kb on - strand, within Echvi_1637 at 1894.418 kb on + strand, within Echvi_1637 at 1894.418 kb on + strand, within Echvi_1637 at 1894.419 kb on - strand, within Echvi_1637 at 1894.419 kb on - strand, within Echvi_1637 at 1894.419 kb on - strand, within Echvi_1637 at 1894.419 kb on - strand, within Echvi_1637 at 1894.419 kb on - strand, within Echvi_1637 at 1894.419 kb on - strand, within Echvi_1637 at 1894.447 kb on + strand, within Echvi_1637 at 1894.447 kb on + strand, within Echvi_1637 at 1894.494 kb on + strand, within Echvi_1637 at 1894.570 kb on + strand at 1894.570 kb on + strand at 1894.571 kb on - strand at 1894.571 kb on - strand at 1894.624 kb on - strand, within Echvi_1638 at 1894.642 kb on - strand, within Echvi_1638 at 1894.668 kb on + strand, within Echvi_1638 at 1894.858 kb on + strand at 1894.921 kb on - strand at 1894.998 kb on + strand, within Echvi_1639 at 1894.999 kb on - strand, within Echvi_1639 at 1894.999 kb on - strand, within Echvi_1639 at 1894.999 kb on - strand, within Echvi_1639 at 1894.999 kb on - strand, within Echvi_1639 at 1895.062 kb on + strand, within Echvi_1639 at 1895.108 kb on - strand, within Echvi_1639 at 1895.108 kb on - strand, within Echvi_1639 at 1895.109 kb on + strand, within Echvi_1639 at 1895.110 kb on - strand, within Echvi_1639 at 1895.165 kb on - strand, within Echvi_1639 at 1895.167 kb on + strand, within Echvi_1639 at 1895.167 kb on + strand, within Echvi_1639 at 1895.168 kb on - strand, within Echvi_1639 at 1895.168 kb on - strand, within Echvi_1639 at 1895.169 kb on + strand, within Echvi_1639 at 1895.169 kb on + strand, within Echvi_1639 at 1895.169 kb on + strand, within Echvi_1639 at 1895.170 kb on - strand, within Echvi_1639 at 1895.170 kb on - strand, within Echvi_1639 at 1895.189 kb on - strand, within Echvi_1639 at 1895.239 kb on + strand, within Echvi_1639 at 1895.283 kb on - strand, within Echvi_1639 at 1895.402 kb on + strand, within Echvi_1639 at 1895.405 kb on + strand, within Echvi_1639 at 1895.405 kb on - strand, within Echvi_1639 at 1895.440 kb on + strand, within Echvi_1639 at 1895.505 kb on + strand, within Echvi_1639 at 1895.533 kb on + strand, within Echvi_1639
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.01 mg/ml remove 1,893,285 - Echvi_1636 0.56 -1.4 1,893,285 - Echvi_1636 0.56 +0.5 1,893,308 - Echvi_1636 0.57 -0.5 1,893,311 - Echvi_1636 0.57 -2.2 1,893,437 + Echvi_1636 0.64 -1.0 1,893,437 + Echvi_1636 0.64 +0.3 1,893,438 - Echvi_1636 0.64 +0.9 1,893,438 - Echvi_1636 0.64 -0.8 1,893,438 - Echvi_1636 0.64 +0.8 1,893,438 - Echvi_1636 0.64 -0.1 1,893,439 + Echvi_1636 0.64 -0.8 1,893,446 - Echvi_1636 0.64 -0.1 1,893,460 + Echvi_1636 0.65 -1.2 1,893,461 - Echvi_1636 0.65 -1.1 1,893,527 + Echvi_1636 0.69 -1.3 1,893,528 - Echvi_1636 0.69 +0.5 1,893,605 + Echvi_1636 0.73 -0.5 1,893,605 + Echvi_1636 0.73 -1.3 1,893,605 + Echvi_1636 0.73 -0.3 1,893,605 + Echvi_1636 0.73 -0.2 1,893,606 - Echvi_1636 0.73 -0.3 1,893,627 - Echvi_1636 0.74 +1.5 1,893,627 - Echvi_1636 0.74 +0.8 1,893,627 - Echvi_1636 0.74 +0.4 1,893,634 + Echvi_1636 0.74 -0.4 1,893,662 + Echvi_1636 0.76 +0.1 1,893,662 + Echvi_1636 0.76 -0.4 1,893,662 + Echvi_1636 0.76 -0.1 1,893,663 - Echvi_1636 0.76 +1.9 1,893,664 + Echvi_1636 0.76 +0.1 1,893,664 + Echvi_1636 0.76 +1.5 1,893,665 - Echvi_1636 0.76 -0.8 1,893,665 - Echvi_1636 0.76 -0.6 1,893,746 + Echvi_1636 0.80 -2.6 1,893,763 + Echvi_1636 0.81 -0.8 1,893,764 - Echvi_1636 0.81 -0.6 1,893,795 + Echvi_1636 0.83 -2.4 1,893,809 - Echvi_1636 0.84 +0.2 1,893,834 - Echvi_1636 0.85 +0.2 1,893,846 + Echvi_1636 0.86 -1.3 1,893,847 - Echvi_1636 0.86 -0.3 1,893,863 - Echvi_1636 0.87 +0.9 1,893,973 + -0.2 1,893,974 - +0.9 1,893,974 - -1.0 1,893,994 + -0.1 1,894,009 + -0.4 1,894,107 - -2.7 1,894,109 + -1.3 1,894,204 - -1.5 1,894,246 - Echvi_1637 0.19 -0.0 1,894,319 - Echvi_1637 0.37 -0.9 1,894,362 - Echvi_1637 0.48 -0.5 1,894,418 + Echvi_1637 0.62 +0.3 1,894,418 + Echvi_1637 0.62 -1.6 1,894,419 - Echvi_1637 0.62 +1.2 1,894,419 - Echvi_1637 0.62 -1.7 1,894,419 - Echvi_1637 0.62 -1.9 1,894,419 - Echvi_1637 0.62 +1.2 1,894,419 - Echvi_1637 0.62 -0.8 1,894,419 - Echvi_1637 0.62 -0.9 1,894,447 + Echvi_1637 0.69 -0.7 1,894,447 + Echvi_1637 0.69 -1.0 1,894,494 + Echvi_1637 0.81 -0.3 1,894,570 + +1.5 1,894,570 + +0.4 1,894,571 - -0.9 1,894,571 - -0.9 1,894,624 - Echvi_1638 0.18 +0.7 1,894,642 - Echvi_1638 0.31 +0.6 1,894,668 + Echvi_1638 0.48 +0.8 1,894,858 + -0.1 1,894,921 - -1.8 1,894,998 + Echvi_1639 0.11 +0.8 1,894,999 - Echvi_1639 0.11 -0.8 1,894,999 - Echvi_1639 0.11 -0.2 1,894,999 - Echvi_1639 0.11 +0.0 1,894,999 - Echvi_1639 0.11 +0.3 1,895,062 + Echvi_1639 0.15 +0.3 1,895,108 - Echvi_1639 0.19 -2.4 1,895,108 - Echvi_1639 0.19 +0.6 1,895,109 + Echvi_1639 0.19 -0.2 1,895,110 - Echvi_1639 0.19 -0.9 1,895,165 - Echvi_1639 0.23 -0.3 1,895,167 + Echvi_1639 0.23 +0.1 1,895,167 + Echvi_1639 0.23 -1.7 1,895,168 - Echvi_1639 0.23 +0.1 1,895,168 - Echvi_1639 0.23 +0.2 1,895,169 + Echvi_1639 0.23 +0.5 1,895,169 + Echvi_1639 0.23 -0.9 1,895,169 + Echvi_1639 0.23 +0.3 1,895,170 - Echvi_1639 0.23 -0.8 1,895,170 - Echvi_1639 0.23 -0.4 1,895,189 - Echvi_1639 0.25 -0.2 1,895,239 + Echvi_1639 0.28 +0.4 1,895,283 - Echvi_1639 0.31 +0.8 1,895,402 + Echvi_1639 0.40 -0.8 1,895,405 + Echvi_1639 0.40 -1.1 1,895,405 - Echvi_1639 0.40 +0.3 1,895,440 + Echvi_1639 0.43 +2.5 1,895,505 + Echvi_1639 0.48 -0.5 1,895,533 + Echvi_1639 0.50 -0.2
Or see this region's nucleotide sequence