Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2671 and EX28DRAFT_2672 are separated by 2 nucleotides EX28DRAFT_2672 and EX28DRAFT_2673 are separated by 18 nucleotides EX28DRAFT_2673 and EX28DRAFT_2674 are separated by 2 nucleotides
EX28DRAFT_2671: EX28DRAFT_2671 - ABC-type dipeptide/oligopeptide/nickel transport systems, permease components, at 2,709,829 to 2,710,704
_2671
EX28DRAFT_2672: EX28DRAFT_2672 - ABC-type dipeptide/oligopeptide/nickel transport systems, permease components, at 2,710,707 to 2,711,648
_2672
EX28DRAFT_2673: EX28DRAFT_2673 - ABC-type dipeptide transport system, periplasmic component, at 2,711,667 to 2,713,181
_2673
EX28DRAFT_2674: EX28DRAFT_2674 - oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain, at 2,713,184 to 2,714,266
_2674
Position (kb)
2711
2712
2713
2714 Strain fitness (log2 ratio)
-1
0
1 at 2710.738 kb on + strand at 2710.994 kb on + strand, within EX28DRAFT_2672 at 2711.014 kb on + strand, within EX28DRAFT_2672 at 2711.014 kb on + strand, within EX28DRAFT_2672 at 2711.015 kb on - strand, within EX28DRAFT_2672 at 2711.328 kb on - strand, within EX28DRAFT_2672 at 2711.455 kb on + strand, within EX28DRAFT_2672 at 2711.668 kb on + strand at 2711.669 kb on - strand at 2711.669 kb on - strand at 2711.768 kb on - strand at 2711.773 kb on + strand at 2711.927 kb on + strand, within EX28DRAFT_2673 at 2711.927 kb on + strand, within EX28DRAFT_2673 at 2711.928 kb on - strand, within EX28DRAFT_2673 at 2712.082 kb on - strand, within EX28DRAFT_2673 at 2712.256 kb on + strand, within EX28DRAFT_2673 at 2712.257 kb on - strand, within EX28DRAFT_2673 at 2712.257 kb on - strand, within EX28DRAFT_2673 at 2712.257 kb on - strand, within EX28DRAFT_2673 at 2712.257 kb on - strand, within EX28DRAFT_2673 at 2712.535 kb on + strand, within EX28DRAFT_2673 at 2712.535 kb on + strand, within EX28DRAFT_2673 at 2712.536 kb on - strand, within EX28DRAFT_2673 at 2713.037 kb on - strand at 2713.037 kb on - strand at 2713.039 kb on + strand at 2713.039 kb on + strand at 2713.039 kb on + strand at 2713.040 kb on - strand at 2713.040 kb on - strand at 2713.040 kb on - strand at 2713.040 kb on - strand at 2713.040 kb on - strand at 2713.040 kb on - strand at 2713.040 kb on - strand at 2713.040 kb on - strand at 2713.040 kb on - strand at 2713.040 kb on - strand at 2713.139 kb on + strand at 2713.140 kb on - strand at 2713.140 kb on - strand at 2713.140 kb on - strand at 2713.140 kb on - strand at 2713.170 kb on - strand at 2713.170 kb on - strand at 2713.170 kb on - strand at 2713.182 kb on + strand at 2713.182 kb on + strand at 2713.279 kb on + strand at 2713.518 kb on + strand, within EX28DRAFT_2674 at 2713.519 kb on - strand, within EX28DRAFT_2674 at 2713.581 kb on + strand, within EX28DRAFT_2674 at 2713.581 kb on + strand, within EX28DRAFT_2674 at 2713.581 kb on + strand, within EX28DRAFT_2674 at 2713.581 kb on + strand, within EX28DRAFT_2674 at 2714.102 kb on - strand, within EX28DRAFT_2674 at 2714.102 kb on - strand, within EX28DRAFT_2674
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 2,710,738 + +0.3 2,710,994 + EX28DRAFT_2672 0.30 -0.0 2,711,014 + EX28DRAFT_2672 0.33 +0.2 2,711,014 + EX28DRAFT_2672 0.33 -0.2 2,711,015 - EX28DRAFT_2672 0.33 -1.2 2,711,328 - EX28DRAFT_2672 0.66 +0.6 2,711,455 + EX28DRAFT_2672 0.79 -0.1 2,711,668 + -0.3 2,711,669 - -0.4 2,711,669 - +0.4 2,711,768 - -0.5 2,711,773 + +0.1 2,711,927 + EX28DRAFT_2673 0.17 -0.7 2,711,927 + EX28DRAFT_2673 0.17 +0.5 2,711,928 - EX28DRAFT_2673 0.17 -0.8 2,712,082 - EX28DRAFT_2673 0.27 +0.0 2,712,256 + EX28DRAFT_2673 0.39 +0.1 2,712,257 - EX28DRAFT_2673 0.39 +0.1 2,712,257 - EX28DRAFT_2673 0.39 -0.2 2,712,257 - EX28DRAFT_2673 0.39 -0.7 2,712,257 - EX28DRAFT_2673 0.39 +0.2 2,712,535 + EX28DRAFT_2673 0.57 -0.3 2,712,535 + EX28DRAFT_2673 0.57 -0.1 2,712,536 - EX28DRAFT_2673 0.57 -0.3 2,713,037 - +0.0 2,713,037 - +0.1 2,713,039 + +0.5 2,713,039 + -0.0 2,713,039 + +0.3 2,713,040 - +0.7 2,713,040 - -0.1 2,713,040 - +0.1 2,713,040 - -0.5 2,713,040 - -0.8 2,713,040 - +0.1 2,713,040 - +0.2 2,713,040 - -0.1 2,713,040 - +0.2 2,713,040 - +0.2 2,713,139 + -0.3 2,713,140 - +0.0 2,713,140 - +0.0 2,713,140 - -1.7 2,713,140 - +0.4 2,713,170 - -0.2 2,713,170 - +0.8 2,713,170 - -1.3 2,713,182 + -0.3 2,713,182 + -0.2 2,713,279 + -0.0 2,713,518 + EX28DRAFT_2674 0.31 +0.5 2,713,519 - EX28DRAFT_2674 0.31 +1.1 2,713,581 + EX28DRAFT_2674 0.37 -0.5 2,713,581 + EX28DRAFT_2674 0.37 -0.0 2,713,581 + EX28DRAFT_2674 0.37 +0.3 2,713,581 + EX28DRAFT_2674 0.37 +0.2 2,714,102 - EX28DRAFT_2674 0.85 +1.3 2,714,102 - EX28DRAFT_2674 0.85 -0.0
Or see this region's nucleotide sequence