Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE41_RS18790 and ABIE41_RS18795 are separated by 4 nucleotides ABIE41_RS18795 and ABIE41_RS18800 overlap by 4 nucleotides ABIE41_RS18800 and ABIE41_RS18805 overlap by 4 nucleotides ABIE41_RS18805 and ABIE41_RS18810 are separated by 14 nucleotides
ABIE41_RS18790: ABIE41_RS18790 - molybdopterin cofactor-binding domain-containing protein, at 3,870,546 to 3,871,589
_RS18790
ABIE41_RS18795: ABIE41_RS18795 - MoxR family ATPase, at 3,871,594 to 3,872,478
_RS18795
ABIE41_RS18800: ABIE41_RS18800 - VWA domain-containing protein, at 3,872,475 to 3,873,587
_RS18800
ABIE41_RS18805: ABIE41_RS18805 - amidohydrolase family protein, at 3,873,584 to 3,874,468
_RS18805
ABIE41_RS18810: ABIE41_RS18810 - MBL fold metallo-hydrolase, at 3,874,483 to 3,875,331
_RS18810
Position (kb)
3872
3873
3874 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3871.623 kb on - strand at 3871.666 kb on + strand at 3871.666 kb on + strand at 3871.666 kb on + strand at 3871.666 kb on + strand at 3871.666 kb on + strand at 3871.667 kb on - strand at 3871.667 kb on - strand at 3871.667 kb on - strand at 3871.667 kb on - strand at 3871.699 kb on + strand, within ABIE41_RS18795 at 3871.850 kb on - strand, within ABIE41_RS18795 at 3871.861 kb on + strand, within ABIE41_RS18795 at 3871.861 kb on + strand, within ABIE41_RS18795 at 3871.861 kb on + strand, within ABIE41_RS18795 at 3871.862 kb on - strand, within ABIE41_RS18795 at 3871.918 kb on + strand, within ABIE41_RS18795 at 3871.919 kb on - strand, within ABIE41_RS18795 at 3871.919 kb on - strand, within ABIE41_RS18795 at 3871.919 kb on - strand, within ABIE41_RS18795 at 3872.173 kb on + strand, within ABIE41_RS18795 at 3872.173 kb on + strand, within ABIE41_RS18795 at 3872.173 kb on + strand, within ABIE41_RS18795 at 3872.173 kb on + strand, within ABIE41_RS18795 at 3872.174 kb on - strand, within ABIE41_RS18795 at 3872.174 kb on - strand, within ABIE41_RS18795 at 3872.174 kb on - strand, within ABIE41_RS18795 at 3872.174 kb on - strand, within ABIE41_RS18795 at 3872.174 kb on - strand, within ABIE41_RS18795 at 3872.174 kb on - strand, within ABIE41_RS18795 at 3872.174 kb on - strand, within ABIE41_RS18795 at 3872.174 kb on - strand, within ABIE41_RS18795 at 3872.607 kb on - strand, within ABIE41_RS18800 at 3872.607 kb on - strand, within ABIE41_RS18800 at 3873.324 kb on + strand, within ABIE41_RS18800 at 3873.325 kb on - strand, within ABIE41_RS18800 at 3873.325 kb on - strand, within ABIE41_RS18800 at 3873.325 kb on - strand, within ABIE41_RS18800 at 3873.325 kb on - strand, within ABIE41_RS18800 at 3873.325 kb on - strand, within ABIE41_RS18800 at 3873.352 kb on + strand, within ABIE41_RS18800 at 3873.521 kb on + strand at 3873.521 kb on + strand at 3873.521 kb on + strand at 3873.522 kb on - strand at 3873.559 kb on + strand at 3873.560 kb on - strand at 3873.560 kb on - strand at 3873.613 kb on + strand at 3873.613 kb on + strand at 3873.614 kb on - strand at 3873.713 kb on + strand, within ABIE41_RS18805 at 3873.755 kb on + strand, within ABIE41_RS18805 at 3873.755 kb on + strand, within ABIE41_RS18805 at 3873.755 kb on + strand, within ABIE41_RS18805 at 3873.755 kb on + strand, within ABIE41_RS18805 at 3873.755 kb on + strand, within ABIE41_RS18805 at 3873.756 kb on - strand, within ABIE41_RS18805 at 3873.756 kb on - strand, within ABIE41_RS18805 at 3873.855 kb on - strand, within ABIE41_RS18805 at 3873.962 kb on + strand, within ABIE41_RS18805 at 3874.035 kb on - strand, within ABIE41_RS18805 at 3874.364 kb on + strand, within ABIE41_RS18805 at 3874.364 kb on + strand, within ABIE41_RS18805 at 3874.365 kb on - strand, within ABIE41_RS18805 at 3874.448 kb on + strand at 3874.448 kb on + strand at 3874.450 kb on - strand at 3874.479 kb on + strand at 3874.479 kb on + strand at 3874.479 kb on + strand at 3874.479 kb on + strand at 3874.479 kb on + strand at 3874.479 kb on + strand at 3874.480 kb on - strand at 3874.480 kb on - strand at 3874.480 kb on - strand at 3874.480 kb on - strand at 3874.480 kb on - strand at 3874.480 kb on - strand at 3874.480 kb on - strand at 3874.480 kb on - strand at 3874.585 kb on + strand, within ABIE41_RS18810 at 3874.585 kb on + strand, within ABIE41_RS18810 at 3874.586 kb on - strand, within ABIE41_RS18810 at 3874.586 kb on - strand, within ABIE41_RS18810 at 3874.586 kb on - strand, within ABIE41_RS18810
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 3,871,623 - -0.7 3,871,666 + -0.3 3,871,666 + +0.0 3,871,666 + -0.1 3,871,666 + +0.2 3,871,666 + +0.5 3,871,667 - +0.1 3,871,667 - -2.0 3,871,667 - -0.3 3,871,667 - -0.4 3,871,699 + ABIE41_RS18795 0.12 +0.5 3,871,850 - ABIE41_RS18795 0.29 -2.1 3,871,861 + ABIE41_RS18795 0.30 -0.6 3,871,861 + ABIE41_RS18795 0.30 -1.4 3,871,861 + ABIE41_RS18795 0.30 +0.8 3,871,862 - ABIE41_RS18795 0.30 +0.2 3,871,918 + ABIE41_RS18795 0.37 -1.5 3,871,919 - ABIE41_RS18795 0.37 -0.9 3,871,919 - ABIE41_RS18795 0.37 -1.9 3,871,919 - ABIE41_RS18795 0.37 -1.1 3,872,173 + ABIE41_RS18795 0.65 -0.9 3,872,173 + ABIE41_RS18795 0.65 -0.4 3,872,173 + ABIE41_RS18795 0.65 -2.0 3,872,173 + ABIE41_RS18795 0.65 -1.1 3,872,174 - ABIE41_RS18795 0.66 -0.9 3,872,174 - ABIE41_RS18795 0.66 -0.2 3,872,174 - ABIE41_RS18795 0.66 -2.4 3,872,174 - ABIE41_RS18795 0.66 +2.3 3,872,174 - ABIE41_RS18795 0.66 +0.2 3,872,174 - ABIE41_RS18795 0.66 +0.4 3,872,174 - ABIE41_RS18795 0.66 +0.3 3,872,174 - ABIE41_RS18795 0.66 +0.0 3,872,607 - ABIE41_RS18800 0.12 +0.2 3,872,607 - ABIE41_RS18800 0.12 +0.3 3,873,324 + ABIE41_RS18800 0.76 -0.7 3,873,325 - ABIE41_RS18800 0.76 -0.9 3,873,325 - ABIE41_RS18800 0.76 -0.2 3,873,325 - ABIE41_RS18800 0.76 +1.5 3,873,325 - ABIE41_RS18800 0.76 +0.8 3,873,325 - ABIE41_RS18800 0.76 -2.8 3,873,352 + ABIE41_RS18800 0.79 +0.5 3,873,521 + -1.9 3,873,521 + +1.8 3,873,521 + -3.1 3,873,522 - -2.8 3,873,559 + -1.3 3,873,560 - -0.1 3,873,560 - +0.3 3,873,613 + +0.8 3,873,613 + -4.0 3,873,614 - -0.9 3,873,713 + ABIE41_RS18805 0.15 +0.6 3,873,755 + ABIE41_RS18805 0.19 -0.1 3,873,755 + ABIE41_RS18805 0.19 +0.7 3,873,755 + ABIE41_RS18805 0.19 -0.4 3,873,755 + ABIE41_RS18805 0.19 -0.5 3,873,755 + ABIE41_RS18805 0.19 -0.7 3,873,756 - ABIE41_RS18805 0.19 -0.5 3,873,756 - ABIE41_RS18805 0.19 -0.4 3,873,855 - ABIE41_RS18805 0.31 +0.3 3,873,962 + ABIE41_RS18805 0.43 -0.1 3,874,035 - ABIE41_RS18805 0.51 -1.7 3,874,364 + ABIE41_RS18805 0.88 -0.9 3,874,364 + ABIE41_RS18805 0.88 -2.3 3,874,365 - ABIE41_RS18805 0.88 -2.5 3,874,448 + +0.1 3,874,448 + -0.0 3,874,450 - -1.1 3,874,479 + -0.0 3,874,479 + -2.5 3,874,479 + +0.5 3,874,479 + -1.3 3,874,479 + -0.6 3,874,479 + -0.7 3,874,480 - +1.5 3,874,480 - -0.5 3,874,480 - +0.5 3,874,480 - -0.1 3,874,480 - +0.9 3,874,480 - +1.5 3,874,480 - -2.2 3,874,480 - -0.2 3,874,585 + ABIE41_RS18810 0.12 -1.1 3,874,585 + ABIE41_RS18810 0.12 -1.5 3,874,586 - ABIE41_RS18810 0.12 -1.4 3,874,586 - ABIE41_RS18810 0.12 -1.4 3,874,586 - ABIE41_RS18810 0.12 -0.3
Or see this region's nucleotide sequence