Strain Fitness in Bosea sp. OAE506 around ABIE41_RS18130

Experiment: m-Inositol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS18125 and ABIE41_RS18130 overlap by 4 nucleotidesABIE41_RS18130 and ABIE41_RS18135 are separated by 148 nucleotides ABIE41_RS18125: ABIE41_RS18125 - urea ABC transporter permease subunit UrtC, at 3,732,375 to 3,733,514 _RS18125 ABIE41_RS18130: ABIE41_RS18130 - urea ABC transporter permease subunit UrtB, at 3,733,511 to 3,735,112 _RS18130 ABIE41_RS18135: ABIE41_RS18135 - urea ABC transporter substrate-binding protein, at 3,735,261 to 3,736,490 _RS18135 Position (kb) 3733 3734 3735 3736Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3732.556 kb on + strand, within ABIE41_RS18125at 3732.556 kb on + strand, within ABIE41_RS18125at 3732.685 kb on - strand, within ABIE41_RS18125at 3732.685 kb on - strand, within ABIE41_RS18125at 3732.688 kb on + strand, within ABIE41_RS18125at 3732.688 kb on + strand, within ABIE41_RS18125at 3732.688 kb on + strand, within ABIE41_RS18125at 3732.688 kb on + strand, within ABIE41_RS18125at 3732.688 kb on + strand, within ABIE41_RS18125at 3732.688 kb on + strand, within ABIE41_RS18125at 3732.688 kb on + strand, within ABIE41_RS18125at 3732.689 kb on - strand, within ABIE41_RS18125at 3732.689 kb on - strand, within ABIE41_RS18125at 3733.004 kb on - strand, within ABIE41_RS18125at 3733.142 kb on - strand, within ABIE41_RS18125at 3733.207 kb on + strand, within ABIE41_RS18125at 3733.207 kb on + strand, within ABIE41_RS18125at 3733.207 kb on + strand, within ABIE41_RS18125at 3733.208 kb on - strand, within ABIE41_RS18125at 3733.208 kb on - strand, within ABIE41_RS18125at 3733.208 kb on - strand, within ABIE41_RS18125at 3733.208 kb on - strand, within ABIE41_RS18125at 3733.208 kb on - strand, within ABIE41_RS18125at 3733.208 kb on - strand, within ABIE41_RS18125at 3733.240 kb on + strand, within ABIE41_RS18125at 3733.240 kb on + strand, within ABIE41_RS18125at 3733.240 kb on + strand, within ABIE41_RS18125at 3733.240 kb on + strand, within ABIE41_RS18125at 3733.240 kb on + strand, within ABIE41_RS18125at 3733.240 kb on + strand, within ABIE41_RS18125at 3733.241 kb on - strand, within ABIE41_RS18125at 3733.241 kb on - strand, within ABIE41_RS18125at 3733.241 kb on - strand, within ABIE41_RS18125at 3733.241 kb on - strand, within ABIE41_RS18125at 3733.241 kb on - strand, within ABIE41_RS18125at 3733.241 kb on - strand, within ABIE41_RS18125at 3733.241 kb on - strand, within ABIE41_RS18125at 3733.241 kb on - strand, within ABIE41_RS18125at 3733.306 kb on + strand, within ABIE41_RS18125at 3733.345 kb on + strand, within ABIE41_RS18125at 3733.345 kb on + strand, within ABIE41_RS18125at 3733.346 kb on - strand, within ABIE41_RS18125at 3733.354 kb on + strand, within ABIE41_RS18125at 3733.355 kb on - strand, within ABIE41_RS18125at 3733.355 kb on - strand, within ABIE41_RS18125at 3733.620 kb on + strandat 3733.620 kb on + strandat 3733.728 kb on + strand, within ABIE41_RS18130at 3733.728 kb on + strand, within ABIE41_RS18130at 3733.728 kb on + strand, within ABIE41_RS18130at 3733.728 kb on + strand, within ABIE41_RS18130at 3733.729 kb on - strand, within ABIE41_RS18130at 3733.729 kb on - strand, within ABIE41_RS18130at 3733.729 kb on - strand, within ABIE41_RS18130at 3733.729 kb on - strand, within ABIE41_RS18130at 3733.729 kb on - strand, within ABIE41_RS18130at 3733.729 kb on - strand, within ABIE41_RS18130at 3733.729 kb on - strand, within ABIE41_RS18130at 3733.729 kb on - strand, within ABIE41_RS18130at 3734.127 kb on + strand, within ABIE41_RS18130at 3734.214 kb on + strand, within ABIE41_RS18130at 3734.214 kb on + strand, within ABIE41_RS18130at 3734.215 kb on - strand, within ABIE41_RS18130at 3735.226 kb on - strandat 3735.226 kb on - strandat 3735.226 kb on - strandat 3735.692 kb on - strand, within ABIE41_RS18135at 3735.692 kb on - strand, within ABIE41_RS18135at 3735.692 kb on - strand, within ABIE41_RS18135at 3735.817 kb on + strand, within ABIE41_RS18135at 3735.937 kb on + strand, within ABIE41_RS18135at 3735.938 kb on - strand, within ABIE41_RS18135at 3735.982 kb on + strand, within ABIE41_RS18135at 3735.982 kb on + strand, within ABIE41_RS18135at 3735.983 kb on - strand, within ABIE41_RS18135at 3735.983 kb on - strand, within ABIE41_RS18135at 3735.983 kb on - strand, within ABIE41_RS18135at 3736.015 kb on + strand, within ABIE41_RS18135at 3736.021 kb on + strand, within ABIE41_RS18135at 3736.022 kb on - strand, within ABIE41_RS18135at 3736.072 kb on + strand, within ABIE41_RS18135at 3736.073 kb on - strand, within ABIE41_RS18135at 3736.073 kb on - strand, within ABIE41_RS18135

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Per-strain Table

Position Strand Gene LocusTag Fraction m-Inositol (C)
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3,732,556 + ABIE41_RS18125 0.16 +0.0
3,732,556 + ABIE41_RS18125 0.16 +0.4
3,732,685 - ABIE41_RS18125 0.27 -0.1
3,732,685 - ABIE41_RS18125 0.27 +0.1
3,732,688 + ABIE41_RS18125 0.27 -0.3
3,732,688 + ABIE41_RS18125 0.27 +0.2
3,732,688 + ABIE41_RS18125 0.27 +0.7
3,732,688 + ABIE41_RS18125 0.27 -1.6
3,732,688 + ABIE41_RS18125 0.27 +0.4
3,732,688 + ABIE41_RS18125 0.27 +1.4
3,732,688 + ABIE41_RS18125 0.27 -0.7
3,732,689 - ABIE41_RS18125 0.28 -0.8
3,732,689 - ABIE41_RS18125 0.28 +0.7
3,733,004 - ABIE41_RS18125 0.55 +1.1
3,733,142 - ABIE41_RS18125 0.67 +0.7
3,733,207 + ABIE41_RS18125 0.73 +0.5
3,733,207 + ABIE41_RS18125 0.73 -2.7
3,733,207 + ABIE41_RS18125 0.73 -1.4
3,733,208 - ABIE41_RS18125 0.73 -0.5
3,733,208 - ABIE41_RS18125 0.73 +0.3
3,733,208 - ABIE41_RS18125 0.73 +0.2
3,733,208 - ABIE41_RS18125 0.73 -0.2
3,733,208 - ABIE41_RS18125 0.73 +0.8
3,733,208 - ABIE41_RS18125 0.73 +1.0
3,733,240 + ABIE41_RS18125 0.76 -0.8
3,733,240 + ABIE41_RS18125 0.76 -0.1
3,733,240 + ABIE41_RS18125 0.76 +0.5
3,733,240 + ABIE41_RS18125 0.76 -1.8
3,733,240 + ABIE41_RS18125 0.76 -0.6
3,733,240 + ABIE41_RS18125 0.76 +0.2
3,733,241 - ABIE41_RS18125 0.76 +1.5
3,733,241 - ABIE41_RS18125 0.76 +0.0
3,733,241 - ABIE41_RS18125 0.76 -0.4
3,733,241 - ABIE41_RS18125 0.76 -0.5
3,733,241 - ABIE41_RS18125 0.76 -0.5
3,733,241 - ABIE41_RS18125 0.76 -0.7
3,733,241 - ABIE41_RS18125 0.76 -1.8
3,733,241 - ABIE41_RS18125 0.76 +0.3
3,733,306 + ABIE41_RS18125 0.82 -0.2
3,733,345 + ABIE41_RS18125 0.85 -2.7
3,733,345 + ABIE41_RS18125 0.85 -1.6
3,733,346 - ABIE41_RS18125 0.85 -0.8
3,733,354 + ABIE41_RS18125 0.86 -0.3
3,733,355 - ABIE41_RS18125 0.86 -2.1
3,733,355 - ABIE41_RS18125 0.86 +0.6
3,733,620 + -0.1
3,733,620 + -2.0
3,733,728 + ABIE41_RS18130 0.14 -0.7
3,733,728 + ABIE41_RS18130 0.14 -1.6
3,733,728 + ABIE41_RS18130 0.14 +0.5
3,733,728 + ABIE41_RS18130 0.14 +0.0
3,733,729 - ABIE41_RS18130 0.14 -1.5
3,733,729 - ABIE41_RS18130 0.14 -0.2
3,733,729 - ABIE41_RS18130 0.14 -0.3
3,733,729 - ABIE41_RS18130 0.14 +2.0
3,733,729 - ABIE41_RS18130 0.14 +1.4
3,733,729 - ABIE41_RS18130 0.14 +0.5
3,733,729 - ABIE41_RS18130 0.14 +0.6
3,733,729 - ABIE41_RS18130 0.14 +0.1
3,734,127 + ABIE41_RS18130 0.38 -0.6
3,734,214 + ABIE41_RS18130 0.44 +0.5
3,734,214 + ABIE41_RS18130 0.44 +1.1
3,734,215 - ABIE41_RS18130 0.44 +0.3
3,735,226 - -1.5
3,735,226 - +0.2
3,735,226 - +0.5
3,735,692 - ABIE41_RS18135 0.35 -0.7
3,735,692 - ABIE41_RS18135 0.35 +0.9
3,735,692 - ABIE41_RS18135 0.35 -1.0
3,735,817 + ABIE41_RS18135 0.45 -0.1
3,735,937 + ABIE41_RS18135 0.55 -0.3
3,735,938 - ABIE41_RS18135 0.55 -0.1
3,735,982 + ABIE41_RS18135 0.59 -0.6
3,735,982 + ABIE41_RS18135 0.59 +1.5
3,735,983 - ABIE41_RS18135 0.59 -0.2
3,735,983 - ABIE41_RS18135 0.59 +0.5
3,735,983 - ABIE41_RS18135 0.59 -0.5
3,736,015 + ABIE41_RS18135 0.61 +0.5
3,736,021 + ABIE41_RS18135 0.62 -2.1
3,736,022 - ABIE41_RS18135 0.62 -1.5
3,736,072 + ABIE41_RS18135 0.66 -0.1
3,736,073 - ABIE41_RS18135 0.66 +1.3
3,736,073 - ABIE41_RS18135 0.66 -3.0

Or see this region's nucleotide sequence