Strain Fitness in Bosea sp. OAE506 around ABIE41_RS15815

Experiment: m-Inositol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS15805 and ABIE41_RS15810 are separated by 179 nucleotidesABIE41_RS15810 and ABIE41_RS15815 overlap by 23 nucleotidesABIE41_RS15815 and ABIE41_RS15820 are separated by 162 nucleotidesABIE41_RS15820 and ABIE41_RS15825 are separated by 117 nucleotides ABIE41_RS15805: ABIE41_RS15805 - YbaN family protein, at 3,239,589 to 3,239,966 _RS15805 ABIE41_RS15810: ABIE41_RS15810 - DUF502 domain-containing protein, at 3,240,146 to 3,240,868 _RS15810 ABIE41_RS15815: ABIE41_RS15815 - ATP-dependent DNA helicase RecG, at 3,240,846 to 3,242,948 _RS15815 ABIE41_RS15820: ABIE41_RS15820 - succinate dehydrogenase assembly factor 2, at 3,243,111 to 3,243,407 _RS15820 ABIE41_RS15825: ABIE41_RS15825 - transcription-repair coupling factor, at 3,243,525 to 3,247,073 _RS15825 Position (kb) 3240 3241 3242 3243Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3240.227 kb on + strand, within ABIE41_RS15810at 3240.338 kb on + strand, within ABIE41_RS15810at 3240.338 kb on + strand, within ABIE41_RS15810at 3240.362 kb on + strand, within ABIE41_RS15810at 3240.431 kb on - strand, within ABIE41_RS15810at 3240.431 kb on - strand, within ABIE41_RS15810at 3240.503 kb on + strand, within ABIE41_RS15810at 3240.503 kb on + strand, within ABIE41_RS15810at 3240.503 kb on + strand, within ABIE41_RS15810at 3240.503 kb on + strand, within ABIE41_RS15810at 3240.504 kb on - strand, within ABIE41_RS15810at 3240.504 kb on - strand, within ABIE41_RS15810at 3240.504 kb on - strand, within ABIE41_RS15810at 3240.504 kb on - strand, within ABIE41_RS15810at 3240.504 kb on - strand, within ABIE41_RS15810at 3240.504 kb on - strand, within ABIE41_RS15810at 3240.722 kb on + strand, within ABIE41_RS15810at 3240.723 kb on - strand, within ABIE41_RS15810at 3240.723 kb on - strand, within ABIE41_RS15810at 3240.723 kb on - strand, within ABIE41_RS15810at 3240.892 kb on + strandat 3240.892 kb on + strandat 3240.892 kb on + strandat 3240.893 kb on - strandat 3240.893 kb on - strandat 3241.163 kb on - strand, within ABIE41_RS15815at 3241.163 kb on - strand, within ABIE41_RS15815at 3241.163 kb on - strand, within ABIE41_RS15815at 3241.429 kb on + strand, within ABIE41_RS15815at 3241.492 kb on + strand, within ABIE41_RS15815at 3241.674 kb on - strand, within ABIE41_RS15815at 3242.065 kb on - strand, within ABIE41_RS15815at 3242.065 kb on - strand, within ABIE41_RS15815at 3243.023 kb on + strandat 3243.024 kb on - strandat 3243.024 kb on - strandat 3243.024 kb on - strandat 3243.024 kb on - strandat 3243.024 kb on - strandat 3243.024 kb on - strandat 3243.025 kb on + strandat 3243.025 kb on + strandat 3243.025 kb on + strandat 3243.026 kb on - strandat 3243.026 kb on - strandat 3243.026 kb on - strandat 3243.027 kb on + strandat 3243.027 kb on + strandat 3243.028 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m-Inositol (C)
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3,240,227 + ABIE41_RS15810 0.11 -0.4
3,240,338 + ABIE41_RS15810 0.27 -0.3
3,240,338 + ABIE41_RS15810 0.27 +0.1
3,240,362 + ABIE41_RS15810 0.30 +0.5
3,240,431 - ABIE41_RS15810 0.39 +0.3
3,240,431 - ABIE41_RS15810 0.39 +1.3
3,240,503 + ABIE41_RS15810 0.49 +0.6
3,240,503 + ABIE41_RS15810 0.49 +1.5
3,240,503 + ABIE41_RS15810 0.49 -1.7
3,240,503 + ABIE41_RS15810 0.49 +1.6
3,240,504 - ABIE41_RS15810 0.50 +1.6
3,240,504 - ABIE41_RS15810 0.50 +0.7
3,240,504 - ABIE41_RS15810 0.50 +1.0
3,240,504 - ABIE41_RS15810 0.50 +1.3
3,240,504 - ABIE41_RS15810 0.50 +0.6
3,240,504 - ABIE41_RS15810 0.50 +0.7
3,240,722 + ABIE41_RS15810 0.80 +0.7
3,240,723 - ABIE41_RS15810 0.80 +1.2
3,240,723 - ABIE41_RS15810 0.80 +1.2
3,240,723 - ABIE41_RS15810 0.80 +0.3
3,240,892 + -1.3
3,240,892 + -1.8
3,240,892 + -1.1
3,240,893 - -2.2
3,240,893 - -2.9
3,241,163 - ABIE41_RS15815 0.15 -0.2
3,241,163 - ABIE41_RS15815 0.15 -1.6
3,241,163 - ABIE41_RS15815 0.15 -1.5
3,241,429 + ABIE41_RS15815 0.28 +0.5
3,241,492 + ABIE41_RS15815 0.31 -0.6
3,241,674 - ABIE41_RS15815 0.39 -2.2
3,242,065 - ABIE41_RS15815 0.58 -0.4
3,242,065 - ABIE41_RS15815 0.58 -0.3
3,243,023 + -1.8
3,243,024 - +0.4
3,243,024 - -0.2
3,243,024 - -0.3
3,243,024 - -1.0
3,243,024 - +0.3
3,243,024 - +0.2
3,243,025 + -2.9
3,243,025 + -2.4
3,243,025 + -0.2
3,243,026 - -2.3
3,243,026 - +2.5
3,243,026 - -1.0
3,243,027 + -3.1
3,243,027 + -0.4
3,243,028 - -0.5

Or see this region's nucleotide sequence