Strain Fitness in Bosea sp. OAE506 around ABIE41_RS15650

Experiment: m-Inositol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS15645 and ABIE41_RS15650 are separated by 275 nucleotidesABIE41_RS15650 and ABIE41_RS15655 are separated by 163 nucleotides ABIE41_RS15645: ABIE41_RS15645 - hypothetical protein, at 3,203,376 to 3,204,170 _RS15645 ABIE41_RS15650: ABIE41_RS15650 - methyltransferase domain-containing protein, at 3,204,446 to 3,205,084 _RS15650 ABIE41_RS15655: ABIE41_RS15655 - TolC family outer membrane protein, at 3,205,248 to 3,206,645 _RS15655 Position (kb) 3204 3205 3206Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3203.699 kb on + strand, within ABIE41_RS15645at 3203.935 kb on + strand, within ABIE41_RS15645at 3203.935 kb on + strand, within ABIE41_RS15645at 3203.935 kb on + strand, within ABIE41_RS15645at 3203.935 kb on + strand, within ABIE41_RS15645at 3203.936 kb on - strand, within ABIE41_RS15645at 3203.936 kb on - strand, within ABIE41_RS15645at 3203.936 kb on - strand, within ABIE41_RS15645at 3203.936 kb on - strand, within ABIE41_RS15645at 3203.936 kb on - strand, within ABIE41_RS15645at 3203.988 kb on + strand, within ABIE41_RS15645at 3204.058 kb on + strand, within ABIE41_RS15645at 3204.058 kb on + strand, within ABIE41_RS15645at 3204.092 kb on - strandat 3204.092 kb on - strandat 3204.092 kb on - strandat 3204.170 kb on + strandat 3204.170 kb on + strandat 3204.170 kb on + strandat 3204.171 kb on - strandat 3204.263 kb on + strandat 3205.082 kb on + strandat 3205.146 kb on + strandat 3205.146 kb on + strandat 3205.147 kb on - strandat 3205.147 kb on - strandat 3205.173 kb on + strandat 3205.173 kb on + strandat 3205.173 kb on + strandat 3205.177 kb on + strandat 3205.177 kb on + strandat 3205.178 kb on - strandat 3205.178 kb on - strandat 3205.698 kb on + strand, within ABIE41_RS15655at 3205.698 kb on + strand, within ABIE41_RS15655at 3205.699 kb on - strand, within ABIE41_RS15655

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Per-strain Table

Position Strand Gene LocusTag Fraction m-Inositol (C)
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3,203,699 + ABIE41_RS15645 0.41 +0.0
3,203,935 + ABIE41_RS15645 0.70 +0.3
3,203,935 + ABIE41_RS15645 0.70 +1.8
3,203,935 + ABIE41_RS15645 0.70 -2.4
3,203,935 + ABIE41_RS15645 0.70 -0.2
3,203,936 - ABIE41_RS15645 0.70 -1.3
3,203,936 - ABIE41_RS15645 0.70 -1.9
3,203,936 - ABIE41_RS15645 0.70 +0.9
3,203,936 - ABIE41_RS15645 0.70 -0.5
3,203,936 - ABIE41_RS15645 0.70 -0.6
3,203,988 + ABIE41_RS15645 0.77 +0.3
3,204,058 + ABIE41_RS15645 0.86 -0.3
3,204,058 + ABIE41_RS15645 0.86 -1.6
3,204,092 - -1.1
3,204,092 - -1.7
3,204,092 - -0.3
3,204,170 + +1.5
3,204,170 + +1.4
3,204,170 + -0.5
3,204,171 - -0.7
3,204,263 + -0.5
3,205,082 + +0.2
3,205,146 + +1.0
3,205,146 + -2.8
3,205,147 - +2.0
3,205,147 - -2.2
3,205,173 + -0.2
3,205,173 + -0.1
3,205,173 + -1.0
3,205,177 + +0.3
3,205,177 + -0.4
3,205,178 - +0.2
3,205,178 - +0.0
3,205,698 + ABIE41_RS15655 0.32 +1.7
3,205,698 + ABIE41_RS15655 0.32 -0.2
3,205,699 - ABIE41_RS15655 0.32 +0.3

Or see this region's nucleotide sequence