Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE41_RS12130 and ABIE41_RS12135 are separated by 4 nucleotides ABIE41_RS12135 and ABIE41_RS12140 are separated by 159 nucleotides
ABIE41_RS12130: ABIE41_RS12130 - aldehyde dehydrogenase family protein, at 2,477,862 to 2,479,331
_RS12130
ABIE41_RS12135: ABIE41_RS12135 - haloacid dehalogenase type II, at 2,479,336 to 2,480,004
_RS12135
ABIE41_RS12140: ABIE41_RS12140 - FAD-binding oxidoreductase, at 2,480,164 to 2,481,486
_RS12140
Position (kb)
2479
2480
2481 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2478.688 kb on - strand, within ABIE41_RS12130 at 2478.789 kb on + strand, within ABIE41_RS12130 at 2478.790 kb on - strand, within ABIE41_RS12130 at 2478.790 kb on - strand, within ABIE41_RS12130 at 2478.887 kb on - strand, within ABIE41_RS12130 at 2478.887 kb on - strand, within ABIE41_RS12130 at 2479.283 kb on + strand at 2479.285 kb on + strand at 2479.285 kb on + strand at 2479.285 kb on + strand at 2479.285 kb on + strand at 2479.285 kb on + strand at 2479.286 kb on - strand at 2479.286 kb on - strand at 2479.286 kb on - strand at 2479.286 kb on - strand at 2479.286 kb on - strand at 2479.286 kb on - strand at 2479.391 kb on + strand at 2479.392 kb on - strand at 2479.535 kb on + strand, within ABIE41_RS12135 at 2479.536 kb on - strand, within ABIE41_RS12135 at 2479.562 kb on + strand, within ABIE41_RS12135 at 2479.562 kb on + strand, within ABIE41_RS12135 at 2479.562 kb on + strand, within ABIE41_RS12135 at 2479.563 kb on - strand, within ABIE41_RS12135 at 2479.587 kb on - strand, within ABIE41_RS12135 at 2479.766 kb on + strand, within ABIE41_RS12135 at 2479.766 kb on + strand, within ABIE41_RS12135 at 2479.767 kb on - strand, within ABIE41_RS12135 at 2479.767 kb on - strand, within ABIE41_RS12135 at 2479.767 kb on - strand, within ABIE41_RS12135 at 2479.767 kb on - strand, within ABIE41_RS12135 at 2479.823 kb on + strand, within ABIE41_RS12135 at 2479.860 kb on - strand, within ABIE41_RS12135 at 2479.950 kb on - strand at 2479.965 kb on - strand at 2480.058 kb on + strand at 2480.341 kb on + strand, within ABIE41_RS12140 at 2480.341 kb on + strand, within ABIE41_RS12140 at 2480.342 kb on - strand, within ABIE41_RS12140 at 2480.387 kb on + strand, within ABIE41_RS12140 at 2480.387 kb on + strand, within ABIE41_RS12140 at 2480.387 kb on + strand, within ABIE41_RS12140 at 2480.387 kb on + strand, within ABIE41_RS12140 at 2480.387 kb on + strand, within ABIE41_RS12140 at 2480.387 kb on + strand, within ABIE41_RS12140 at 2480.387 kb on + strand, within ABIE41_RS12140 at 2480.387 kb on + strand, within ABIE41_RS12140 at 2480.387 kb on + strand, within ABIE41_RS12140 at 2480.387 kb on + strand, within ABIE41_RS12140 at 2480.387 kb on + strand, within ABIE41_RS12140 at 2480.387 kb on + strand, within ABIE41_RS12140 at 2480.387 kb on + strand, within ABIE41_RS12140 at 2480.387 kb on + strand, within ABIE41_RS12140 at 2480.387 kb on + strand, within ABIE41_RS12140 at 2480.387 kb on + strand, within ABIE41_RS12140 at 2480.387 kb on + strand, within ABIE41_RS12140 at 2480.387 kb on + strand, within ABIE41_RS12140 at 2480.387 kb on + strand, within ABIE41_RS12140 at 2480.388 kb on - strand, within ABIE41_RS12140 at 2480.388 kb on - strand, within ABIE41_RS12140 at 2480.388 kb on - strand, within ABIE41_RS12140 at 2480.388 kb on - strand, within ABIE41_RS12140 at 2480.388 kb on - strand, within ABIE41_RS12140 at 2480.388 kb on - strand, within ABIE41_RS12140 at 2480.388 kb on - strand, within ABIE41_RS12140 at 2480.388 kb on - strand, within ABIE41_RS12140 at 2480.388 kb on - strand, within ABIE41_RS12140 at 2480.388 kb on - strand, within ABIE41_RS12140 at 2480.388 kb on - strand, within ABIE41_RS12140 at 2480.388 kb on - strand, within ABIE41_RS12140 at 2480.388 kb on - strand, within ABIE41_RS12140 at 2480.388 kb on - strand, within ABIE41_RS12140 at 2480.690 kb on + strand, within ABIE41_RS12140 at 2480.690 kb on + strand, within ABIE41_RS12140 at 2480.690 kb on + strand, within ABIE41_RS12140 at 2480.690 kb on + strand, within ABIE41_RS12140 at 2480.690 kb on + strand, within ABIE41_RS12140 at 2480.690 kb on + strand, within ABIE41_RS12140 at 2480.690 kb on + strand, within ABIE41_RS12140 at 2480.690 kb on + strand, within ABIE41_RS12140 at 2480.691 kb on - strand, within ABIE41_RS12140 at 2480.691 kb on - strand, within ABIE41_RS12140 at 2480.691 kb on - strand, within ABIE41_RS12140 at 2480.691 kb on - strand, within ABIE41_RS12140 at 2480.691 kb on - strand, within ABIE41_RS12140 at 2480.691 kb on - strand, within ABIE41_RS12140 at 2480.691 kb on - strand, within ABIE41_RS12140 at 2480.732 kb on + strand, within ABIE41_RS12140 at 2480.733 kb on - strand, within ABIE41_RS12140 at 2480.733 kb on - strand, within ABIE41_RS12140 at 2480.733 kb on - strand, within ABIE41_RS12140 at 2480.733 kb on - strand, within ABIE41_RS12140
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 2,478,688 - ABIE41_RS12130 0.56 +1.5 2,478,789 + ABIE41_RS12130 0.63 -0.2 2,478,790 - ABIE41_RS12130 0.63 +1.0 2,478,790 - ABIE41_RS12130 0.63 -3.0 2,478,887 - ABIE41_RS12130 0.70 -0.4 2,478,887 - ABIE41_RS12130 0.70 -0.2 2,479,283 + -0.8 2,479,285 + +0.0 2,479,285 + +0.2 2,479,285 + -0.5 2,479,285 + -1.5 2,479,285 + -0.2 2,479,286 - +0.1 2,479,286 - -0.6 2,479,286 - -2.6 2,479,286 - -1.1 2,479,286 - -1.3 2,479,286 - -0.6 2,479,391 + +1.1 2,479,392 - +1.0 2,479,535 + ABIE41_RS12135 0.30 +1.8 2,479,536 - ABIE41_RS12135 0.30 -0.5 2,479,562 + ABIE41_RS12135 0.34 +0.1 2,479,562 + ABIE41_RS12135 0.34 +0.7 2,479,562 + ABIE41_RS12135 0.34 +0.4 2,479,563 - ABIE41_RS12135 0.34 +0.5 2,479,587 - ABIE41_RS12135 0.38 -1.9 2,479,766 + ABIE41_RS12135 0.64 +0.4 2,479,766 + ABIE41_RS12135 0.64 +1.5 2,479,767 - ABIE41_RS12135 0.64 +0.1 2,479,767 - ABIE41_RS12135 0.64 -0.1 2,479,767 - ABIE41_RS12135 0.64 +0.3 2,479,767 - ABIE41_RS12135 0.64 +0.2 2,479,823 + ABIE41_RS12135 0.73 +0.6 2,479,860 - ABIE41_RS12135 0.78 +0.1 2,479,950 - +0.3 2,479,965 - +0.8 2,480,058 + -0.8 2,480,341 + ABIE41_RS12140 0.13 -0.9 2,480,341 + ABIE41_RS12140 0.13 +0.2 2,480,342 - ABIE41_RS12140 0.13 -0.0 2,480,387 + ABIE41_RS12140 0.17 -1.8 2,480,387 + ABIE41_RS12140 0.17 -1.6 2,480,387 + ABIE41_RS12140 0.17 -0.8 2,480,387 + ABIE41_RS12140 0.17 -1.0 2,480,387 + ABIE41_RS12140 0.17 -1.8 2,480,387 + ABIE41_RS12140 0.17 -0.2 2,480,387 + ABIE41_RS12140 0.17 +0.9 2,480,387 + ABIE41_RS12140 0.17 -1.0 2,480,387 + ABIE41_RS12140 0.17 +0.3 2,480,387 + ABIE41_RS12140 0.17 -3.1 2,480,387 + ABIE41_RS12140 0.17 -1.6 2,480,387 + ABIE41_RS12140 0.17 -1.0 2,480,387 + ABIE41_RS12140 0.17 +1.0 2,480,387 + ABIE41_RS12140 0.17 -1.0 2,480,387 + ABIE41_RS12140 0.17 +0.1 2,480,387 + ABIE41_RS12140 0.17 +0.8 2,480,387 + ABIE41_RS12140 0.17 +0.4 2,480,387 + ABIE41_RS12140 0.17 +0.3 2,480,387 + ABIE41_RS12140 0.17 -3.3 2,480,388 - ABIE41_RS12140 0.17 -0.1 2,480,388 - ABIE41_RS12140 0.17 +0.9 2,480,388 - ABIE41_RS12140 0.17 +1.7 2,480,388 - ABIE41_RS12140 0.17 -1.1 2,480,388 - ABIE41_RS12140 0.17 -0.3 2,480,388 - ABIE41_RS12140 0.17 +0.3 2,480,388 - ABIE41_RS12140 0.17 +0.9 2,480,388 - ABIE41_RS12140 0.17 -2.0 2,480,388 - ABIE41_RS12140 0.17 +0.3 2,480,388 - ABIE41_RS12140 0.17 +0.6 2,480,388 - ABIE41_RS12140 0.17 +0.2 2,480,388 - ABIE41_RS12140 0.17 -2.8 2,480,388 - ABIE41_RS12140 0.17 -1.3 2,480,388 - ABIE41_RS12140 0.17 +0.3 2,480,690 + ABIE41_RS12140 0.40 +2.6 2,480,690 + ABIE41_RS12140 0.40 -1.5 2,480,690 + ABIE41_RS12140 0.40 +1.7 2,480,690 + ABIE41_RS12140 0.40 -0.3 2,480,690 + ABIE41_RS12140 0.40 -0.4 2,480,690 + ABIE41_RS12140 0.40 +0.9 2,480,690 + ABIE41_RS12140 0.40 +1.6 2,480,690 + ABIE41_RS12140 0.40 -0.2 2,480,691 - ABIE41_RS12140 0.40 -0.4 2,480,691 - ABIE41_RS12140 0.40 -2.1 2,480,691 - ABIE41_RS12140 0.40 +2.3 2,480,691 - ABIE41_RS12140 0.40 +1.3 2,480,691 - ABIE41_RS12140 0.40 +0.2 2,480,691 - ABIE41_RS12140 0.40 +1.0 2,480,691 - ABIE41_RS12140 0.40 +1.4 2,480,732 + ABIE41_RS12140 0.43 -0.8 2,480,733 - ABIE41_RS12140 0.43 -0.9 2,480,733 - ABIE41_RS12140 0.43 -1.9 2,480,733 - ABIE41_RS12140 0.43 +0.3 2,480,733 - ABIE41_RS12140 0.43 -0.9
Or see this region's nucleotide sequence