Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE41_RS07990 and ABIE41_RS07995 are separated by 121 nucleotides ABIE41_RS07995 and ABIE41_RS08000 overlap by 29 nucleotides
ABIE41_RS07990: ABIE41_RS07990 - GTP-binding protein, at 1,641,858 to 1,643,012
_RS07990
ABIE41_RS07995: ABIE41_RS07995 - GNAT family N-acetyltransferase, at 1,643,134 to 1,644,300
_RS07995
ABIE41_RS08000: ABIE41_RS08000 - AMP-binding protein, at 1,644,272 to 1,645,888
_RS08000
Position (kb) 1643
1644
1645 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 1642.483 kb on - strand, within ABIE41_RS07990 at 1644.016 kb on + strand, within ABIE41_RS07995 at 1644.016 kb on + strand, within ABIE41_RS07995 at 1644.016 kb on + strand, within ABIE41_RS07995 at 1644.016 kb on + strand, within ABIE41_RS07995 at 1644.017 kb on - strand, within ABIE41_RS07995 at 1644.017 kb on - strand, within ABIE41_RS07995 at 1644.017 kb on - strand, within ABIE41_RS07995 at 1644.017 kb on - strand, within ABIE41_RS07995 at 1644.357 kb on + strand at 1644.606 kb on + strand, within ABIE41_RS08000 at 1644.606 kb on + strand, within ABIE41_RS08000 at 1644.606 kb on + strand, within ABIE41_RS08000 at 1644.606 kb on + strand, within ABIE41_RS08000 at 1644.606 kb on + strand, within ABIE41_RS08000 at 1644.607 kb on - strand, within ABIE41_RS08000 at 1644.607 kb on - strand, within ABIE41_RS08000 at 1644.882 kb on + strand, within ABIE41_RS08000 at 1644.882 kb on + strand, within ABIE41_RS08000 at 1644.882 kb on + strand, within ABIE41_RS08000 at 1644.883 kb on - strand, within ABIE41_RS08000
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 1,642,483 - ABIE41_RS07990 0.54 -0.9 1,644,016 + ABIE41_RS07995 0.76 +0.4 1,644,016 + ABIE41_RS07995 0.76 +0.0 1,644,016 + ABIE41_RS07995 0.76 +0.3 1,644,016 + ABIE41_RS07995 0.76 +0.3 1,644,017 - ABIE41_RS07995 0.76 +0.5 1,644,017 - ABIE41_RS07995 0.76 +1.4 1,644,017 - ABIE41_RS07995 0.76 -0.1 1,644,017 - ABIE41_RS07995 0.76 -0.4 1,644,357 + -0.1 1,644,606 + ABIE41_RS08000 0.21 +1.6 1,644,606 + ABIE41_RS08000 0.21 -0.2 1,644,606 + ABIE41_RS08000 0.21 -1.0 1,644,606 + ABIE41_RS08000 0.21 -3.1 1,644,606 + ABIE41_RS08000 0.21 +0.1 1,644,607 - ABIE41_RS08000 0.21 -0.0 1,644,607 - ABIE41_RS08000 0.21 -0.8 1,644,882 + ABIE41_RS08000 0.38 +0.1 1,644,882 + ABIE41_RS08000 0.38 -0.2 1,644,882 + ABIE41_RS08000 0.38 -0.1 1,644,883 - ABIE41_RS08000 0.38 +0.0
Or see this region's nucleotide sequence