Strain Fitness in Bosea sp. OAE506 around ABIE41_RS07695

Experiment: m-Inositol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS07685 and ABIE41_RS07690 overlap by 1 nucleotidesABIE41_RS07690 and ABIE41_RS07695 are separated by 88 nucleotidesABIE41_RS07695 and ABIE41_RS07700 are separated by 112 nucleotides ABIE41_RS07685: ABIE41_RS07685 - phosphonate C-P lyase system protein PhnH, at 1,571,394 to 1,571,996 _RS07685 ABIE41_RS07690: ABIE41_RS07690 - phosphonate C-P lyase system protein PhnG, at 1,571,996 to 1,572,433 _RS07690 ABIE41_RS07695: ABIE41_RS07695 - phosphonate metabolism transcriptional regulator PhnF, at 1,572,522 to 1,573,274 _RS07695 ABIE41_RS07700: ABIE41_RS07700 - alpha/beta fold hydrolase, at 1,573,387 to 1,574,466 _RS07700 Position (kb) 1572 1573 1574Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1571.812 kb on + strand, within ABIE41_RS07685at 1571.813 kb on - strand, within ABIE41_RS07685at 1572.192 kb on + strand, within ABIE41_RS07690at 1572.192 kb on + strand, within ABIE41_RS07690at 1572.192 kb on + strand, within ABIE41_RS07690at 1572.192 kb on + strand, within ABIE41_RS07690at 1572.192 kb on + strand, within ABIE41_RS07690at 1572.193 kb on - strand, within ABIE41_RS07690at 1572.193 kb on - strand, within ABIE41_RS07690at 1572.193 kb on - strand, within ABIE41_RS07690at 1572.193 kb on - strand, within ABIE41_RS07690at 1572.669 kb on + strand, within ABIE41_RS07695at 1572.670 kb on - strand, within ABIE41_RS07695at 1572.760 kb on + strand, within ABIE41_RS07695at 1572.760 kb on + strand, within ABIE41_RS07695at 1572.761 kb on - strand, within ABIE41_RS07695at 1572.882 kb on + strand, within ABIE41_RS07695at 1572.884 kb on + strand, within ABIE41_RS07695at 1572.885 kb on - strand, within ABIE41_RS07695at 1572.885 kb on - strand, within ABIE41_RS07695at 1572.885 kb on - strand, within ABIE41_RS07695at 1573.063 kb on - strand, within ABIE41_RS07695at 1573.063 kb on - strand, within ABIE41_RS07695at 1573.063 kb on - strand, within ABIE41_RS07695at 1573.077 kb on + strand, within ABIE41_RS07695at 1573.078 kb on - strand, within ABIE41_RS07695at 1573.078 kb on - strand, within ABIE41_RS07695at 1573.078 kb on - strand, within ABIE41_RS07695at 1573.078 kb on - strand, within ABIE41_RS07695at 1573.078 kb on - strand, within ABIE41_RS07695at 1573.687 kb on + strand, within ABIE41_RS07700at 1573.687 kb on + strand, within ABIE41_RS07700at 1573.687 kb on + strand, within ABIE41_RS07700at 1573.688 kb on - strand, within ABIE41_RS07700at 1573.688 kb on - strand, within ABIE41_RS07700at 1573.688 kb on - strand, within ABIE41_RS07700at 1573.688 kb on - strand, within ABIE41_RS07700at 1573.769 kb on - strand, within ABIE41_RS07700at 1573.774 kb on + strand, within ABIE41_RS07700at 1573.775 kb on - strand, within ABIE41_RS07700at 1573.775 kb on - strand, within ABIE41_RS07700at 1573.775 kb on - strand, within ABIE41_RS07700at 1574.023 kb on + strand, within ABIE41_RS07700at 1574.023 kb on + strand, within ABIE41_RS07700at 1574.023 kb on + strand, within ABIE41_RS07700at 1574.023 kb on + strand, within ABIE41_RS07700at 1574.023 kb on + strand, within ABIE41_RS07700at 1574.024 kb on - strand, within ABIE41_RS07700at 1574.024 kb on - strand, within ABIE41_RS07700at 1574.024 kb on - strand, within ABIE41_RS07700at 1574.024 kb on - strand, within ABIE41_RS07700at 1574.024 kb on - strand, within ABIE41_RS07700at 1574.191 kb on + strand, within ABIE41_RS07700at 1574.215 kb on + strand, within ABIE41_RS07700at 1574.216 kb on - strand, within ABIE41_RS07700at 1574.216 kb on - strand, within ABIE41_RS07700at 1574.229 kb on + strand, within ABIE41_RS07700

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Per-strain Table

Position Strand Gene LocusTag Fraction m-Inositol (C)
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1,571,812 + ABIE41_RS07685 0.69 +0.0
1,571,813 - ABIE41_RS07685 0.69 +0.1
1,572,192 + ABIE41_RS07690 0.45 -0.2
1,572,192 + ABIE41_RS07690 0.45 +0.1
1,572,192 + ABIE41_RS07690 0.45 +0.1
1,572,192 + ABIE41_RS07690 0.45 +0.7
1,572,192 + ABIE41_RS07690 0.45 -1.7
1,572,193 - ABIE41_RS07690 0.45 +0.9
1,572,193 - ABIE41_RS07690 0.45 +1.6
1,572,193 - ABIE41_RS07690 0.45 -2.8
1,572,193 - ABIE41_RS07690 0.45 +0.6
1,572,669 + ABIE41_RS07695 0.20 -0.4
1,572,670 - ABIE41_RS07695 0.20 -1.7
1,572,760 + ABIE41_RS07695 0.32 -0.5
1,572,760 + ABIE41_RS07695 0.32 -0.4
1,572,761 - ABIE41_RS07695 0.32 -2.2
1,572,882 + ABIE41_RS07695 0.48 -0.1
1,572,884 + ABIE41_RS07695 0.48 +0.4
1,572,885 - ABIE41_RS07695 0.48 -0.7
1,572,885 - ABIE41_RS07695 0.48 -1.2
1,572,885 - ABIE41_RS07695 0.48 -0.0
1,573,063 - ABIE41_RS07695 0.72 +0.2
1,573,063 - ABIE41_RS07695 0.72 +0.1
1,573,063 - ABIE41_RS07695 0.72 +0.6
1,573,077 + ABIE41_RS07695 0.74 -1.7
1,573,078 - ABIE41_RS07695 0.74 -1.4
1,573,078 - ABIE41_RS07695 0.74 -0.5
1,573,078 - ABIE41_RS07695 0.74 -0.2
1,573,078 - ABIE41_RS07695 0.74 -1.8
1,573,078 - ABIE41_RS07695 0.74 -0.1
1,573,687 + ABIE41_RS07700 0.28 -3.1
1,573,687 + ABIE41_RS07700 0.28 +3.5
1,573,687 + ABIE41_RS07700 0.28 -0.7
1,573,688 - ABIE41_RS07700 0.28 +0.8
1,573,688 - ABIE41_RS07700 0.28 -1.3
1,573,688 - ABIE41_RS07700 0.28 -1.0
1,573,688 - ABIE41_RS07700 0.28 +0.2
1,573,769 - ABIE41_RS07700 0.35 +0.0
1,573,774 + ABIE41_RS07700 0.36 -1.7
1,573,775 - ABIE41_RS07700 0.36 -0.8
1,573,775 - ABIE41_RS07700 0.36 +0.2
1,573,775 - ABIE41_RS07700 0.36 -0.1
1,574,023 + ABIE41_RS07700 0.59 +0.3
1,574,023 + ABIE41_RS07700 0.59 +0.9
1,574,023 + ABIE41_RS07700 0.59 -2.1
1,574,023 + ABIE41_RS07700 0.59 +0.1
1,574,023 + ABIE41_RS07700 0.59 -0.5
1,574,024 - ABIE41_RS07700 0.59 -0.1
1,574,024 - ABIE41_RS07700 0.59 -1.8
1,574,024 - ABIE41_RS07700 0.59 -0.9
1,574,024 - ABIE41_RS07700 0.59 +0.1
1,574,024 - ABIE41_RS07700 0.59 +1.2
1,574,191 + ABIE41_RS07700 0.74 +0.5
1,574,215 + ABIE41_RS07700 0.77 -0.3
1,574,216 - ABIE41_RS07700 0.77 +0.5
1,574,216 - ABIE41_RS07700 0.77 +0.3
1,574,229 + ABIE41_RS07700 0.78 -2.8

Or see this region's nucleotide sequence