Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE41_RS05215 and ABIE41_RS05220 are separated by 112 nucleotides ABIE41_RS05220 and ABIE41_RS05225 are separated by 67 nucleotides ABIE41_RS05225 and ABIE41_RS05230 are separated by 126 nucleotides ABIE41_RS05230 and ABIE41_RS05235 are separated by 112 nucleotides
ABIE41_RS05215: ABIE41_RS05215 - DSD1 family PLP-dependent enzyme, at 1,079,033 to 1,080,169
_RS05215
ABIE41_RS05220: ABIE41_RS05220 - ABC transporter ATP-binding protein, at 1,080,282 to 1,082,102
_RS05220
ABIE41_RS05225: ABIE41_RS05225 - phosphoribosyl-ATP diphosphatase, at 1,082,170 to 1,082,544
_RS05225
ABIE41_RS05230: ABIE41_RS05230 - tRNA-Arg, at 1,082,671 to 1,082,747
_RS05230
ABIE41_RS05235: ABIE41_RS05235 - LacI family DNA-binding transcriptional regulator, at 1,082,860 to 1,083,891
_RS05235
Position (kb) 1080
1081
1082
1083 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1079.415 kb on + strand, within ABIE41_RS05215 at 1079.415 kb on + strand, within ABIE41_RS05215 at 1079.415 kb on + strand, within ABIE41_RS05215 at 1079.416 kb on - strand, within ABIE41_RS05215 at 1079.416 kb on - strand, within ABIE41_RS05215 at 1079.436 kb on + strand, within ABIE41_RS05215 at 1079.436 kb on + strand, within ABIE41_RS05215 at 1079.436 kb on + strand, within ABIE41_RS05215 at 1079.436 kb on + strand, within ABIE41_RS05215 at 1079.436 kb on + strand, within ABIE41_RS05215 at 1079.436 kb on + strand, within ABIE41_RS05215 at 1079.436 kb on + strand, within ABIE41_RS05215 at 1079.436 kb on + strand, within ABIE41_RS05215 at 1079.436 kb on + strand, within ABIE41_RS05215 at 1079.437 kb on - strand, within ABIE41_RS05215 at 1079.437 kb on - strand, within ABIE41_RS05215 at 1079.437 kb on - strand, within ABIE41_RS05215 at 1079.437 kb on - strand, within ABIE41_RS05215 at 1079.437 kb on - strand, within ABIE41_RS05215 at 1079.437 kb on - strand, within ABIE41_RS05215 at 1079.437 kb on - strand, within ABIE41_RS05215 at 1079.437 kb on - strand, within ABIE41_RS05215 at 1079.437 kb on - strand, within ABIE41_RS05215 at 1079.437 kb on - strand, within ABIE41_RS05215 at 1079.437 kb on - strand, within ABIE41_RS05215 at 1079.634 kb on + strand, within ABIE41_RS05215 at 1079.634 kb on + strand, within ABIE41_RS05215 at 1079.634 kb on + strand, within ABIE41_RS05215 at 1079.635 kb on - strand, within ABIE41_RS05215 at 1079.635 kb on - strand, within ABIE41_RS05215 at 1079.635 kb on - strand, within ABIE41_RS05215 at 1080.055 kb on + strand, within ABIE41_RS05215 at 1080.055 kb on + strand, within ABIE41_RS05215 at 1080.055 kb on + strand, within ABIE41_RS05215 at 1080.055 kb on + strand, within ABIE41_RS05215 at 1080.055 kb on + strand, within ABIE41_RS05215 at 1080.269 kb on + strand at 1080.269 kb on + strand at 1080.308 kb on + strand at 1082.371 kb on + strand, within ABIE41_RS05225 at 1082.371 kb on + strand, within ABIE41_RS05225 at 1082.371 kb on + strand, within ABIE41_RS05225 at 1082.372 kb on - strand, within ABIE41_RS05225 at 1082.453 kb on - strand, within ABIE41_RS05225 at 1082.453 kb on - strand, within ABIE41_RS05225 at 1082.760 kb on - strand at 1082.760 kb on - strand at 1082.958 kb on + strand at 1082.958 kb on + strand at 1082.958 kb on + strand at 1082.959 kb on - strand at 1082.959 kb on - strand at 1082.978 kb on + strand, within ABIE41_RS05235 at 1082.979 kb on - strand, within ABIE41_RS05235 at 1083.095 kb on + strand, within ABIE41_RS05235
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 1,079,415 + ABIE41_RS05215 0.34 -0.6 1,079,415 + ABIE41_RS05215 0.34 +0.2 1,079,415 + ABIE41_RS05215 0.34 -2.5 1,079,416 - ABIE41_RS05215 0.34 +1.4 1,079,416 - ABIE41_RS05215 0.34 -0.5 1,079,436 + ABIE41_RS05215 0.35 -1.2 1,079,436 + ABIE41_RS05215 0.35 +0.6 1,079,436 + ABIE41_RS05215 0.35 -1.2 1,079,436 + ABIE41_RS05215 0.35 -2.7 1,079,436 + ABIE41_RS05215 0.35 -0.2 1,079,436 + ABIE41_RS05215 0.35 +0.0 1,079,436 + ABIE41_RS05215 0.35 -1.0 1,079,436 + ABIE41_RS05215 0.35 -0.1 1,079,436 + ABIE41_RS05215 0.35 +1.1 1,079,437 - ABIE41_RS05215 0.36 +0.5 1,079,437 - ABIE41_RS05215 0.36 -0.1 1,079,437 - ABIE41_RS05215 0.36 +0.3 1,079,437 - ABIE41_RS05215 0.36 -0.8 1,079,437 - ABIE41_RS05215 0.36 +0.2 1,079,437 - ABIE41_RS05215 0.36 -0.4 1,079,437 - ABIE41_RS05215 0.36 -0.6 1,079,437 - ABIE41_RS05215 0.36 -0.7 1,079,437 - ABIE41_RS05215 0.36 +1.3 1,079,437 - ABIE41_RS05215 0.36 +1.6 1,079,437 - ABIE41_RS05215 0.36 +0.8 1,079,634 + ABIE41_RS05215 0.53 +0.8 1,079,634 + ABIE41_RS05215 0.53 +0.5 1,079,634 + ABIE41_RS05215 0.53 -0.7 1,079,635 - ABIE41_RS05215 0.53 -0.7 1,079,635 - ABIE41_RS05215 0.53 -2.4 1,079,635 - ABIE41_RS05215 0.53 -0.2 1,080,055 + ABIE41_RS05215 0.90 +0.4 1,080,055 + ABIE41_RS05215 0.90 +0.3 1,080,055 + ABIE41_RS05215 0.90 +0.7 1,080,055 + ABIE41_RS05215 0.90 +1.6 1,080,055 + ABIE41_RS05215 0.90 -1.4 1,080,269 + -0.6 1,080,269 + +0.6 1,080,308 + +0.3 1,082,371 + ABIE41_RS05225 0.54 +0.6 1,082,371 + ABIE41_RS05225 0.54 -1.2 1,082,371 + ABIE41_RS05225 0.54 -0.4 1,082,372 - ABIE41_RS05225 0.54 -0.4 1,082,453 - ABIE41_RS05225 0.75 -1.8 1,082,453 - ABIE41_RS05225 0.75 -1.2 1,082,760 - -0.3 1,082,760 - +0.3 1,082,958 + +0.9 1,082,958 + +0.6 1,082,958 + +0.0 1,082,959 - -0.3 1,082,959 - -1.0 1,082,978 + ABIE41_RS05235 0.11 +2.1 1,082,979 - ABIE41_RS05235 0.12 -0.6 1,083,095 + ABIE41_RS05235 0.23 +1.5
Or see this region's nucleotide sequence