Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4502

Experiment: D-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (C)
5,029,300	-				+0.3
5,029,352	-				-0.1
5,029,352	-				-0.4
5,029,414	+				-0.3
5,029,415	-				+1.3
5,029,415	-				-0.7
5,029,415	-				+0.4
5,029,415	-				+0.6
5,029,465	-		PfGW456L13_4501	0.15	+0.3
5,029,510	+		PfGW456L13_4501	0.20	-0.4
5,029,510	+		PfGW456L13_4501	0.20	+0.1
5,029,510	+		PfGW456L13_4501	0.20	+0.9
5,029,511	-		PfGW456L13_4501	0.20	+0.6
5,029,562	+		PfGW456L13_4501	0.26	+0.1
5,029,618	+				-1.4
5,029,619	-		PfGW456L13_4501	0.32	+0.3
5,029,882	+		PfGW456L13_4501	0.61	+0.6
5,029,882	+		PfGW456L13_4501	0.61	-0.2
5,029,882	+		PfGW456L13_4501	0.61	+0.4
5,029,882	+		PfGW456L13_4501	0.61	-0.2
5,029,882	+		PfGW456L13_4501	0.61	+0.6
5,029,883	-		PfGW456L13_4501	0.62	-0.1
5,029,996	+		PfGW456L13_4501	0.74	+0.5
5,029,996	+		PfGW456L13_4501	0.74	-1.4
5,029,996	+		PfGW456L13_4501	0.74	-0.2
5,029,996	+		PfGW456L13_4501	0.74	-1.7
5,029,997	-		PfGW456L13_4501	0.74	-0.4
5,029,997	-		PfGW456L13_4501	0.74	-0.2
5,030,032	+		PfGW456L13_4501	0.78	-0.9
5,030,032	+		PfGW456L13_4501	0.78	+1.5
5,030,033	-		PfGW456L13_4501	0.78	+0.1
5,030,033	-		PfGW456L13_4501	0.78	+1.2
5,030,033	-		PfGW456L13_4501	0.78	+0.1
5,030,066	+		PfGW456L13_4501	0.82	-1.0
5,030,066	+		PfGW456L13_4501	0.82	+0.1
5,030,067	-		PfGW456L13_4501	0.82	+1.5
5,030,256	-				-0.1
5,030,517	+		PfGW456L13_4502	0.78	-0.4
5,030,517	+		PfGW456L13_4502	0.78	-0.4
5,030,517	+		PfGW456L13_4502	0.78	-0.7
5,030,517	+		PfGW456L13_4502	0.78	-0.9
5,030,517	+		PfGW456L13_4502	0.78	-0.1
5,030,518	-		PfGW456L13_4502	0.79	-1.8
5,030,518	-		PfGW456L13_4502	0.79	+0.1
5,030,518	-		PfGW456L13_4502	0.79	-0.7
5,030,518	-		PfGW456L13_4502	0.79	-1.5
5,030,518	-		PfGW456L13_4502	0.79	-0.4
5,030,518	-		PfGW456L13_4502	0.79	-0.3
5,030,518	-		PfGW456L13_4502	0.79	-0.1
5,030,518	-		PfGW456L13_4502	0.79	-0.1
5,030,573	+				+0.0
5,030,573	+				-0.0
5,030,573	+				+0.5
5,030,573	+				+0.4
5,030,574	-				+1.3
5,030,574	-				-0.4
5,030,574	-				-0.1
5,030,574	-				+0.3
5,030,574	-				-0.6
5,030,574	-				-0.5
5,030,574	-				+0.6
5,030,574	-				-1.3
5,030,609	+				-0.5
5,030,609	+				+0.8
5,030,609	+				-0.0
5,030,609	+				-0.1
5,030,610	-				+0.1
5,030,610	-				-0.9
5,030,610	-				-0.3
5,030,610	-				+0.4
5,030,610	-				-1.1
5,030,610	-				+0.0
5,030,610	-				+1.4
5,030,610	-				+1.7
5,030,610	-				+0.5
5,030,629	+				-2.4
5,030,629	+				+0.1
5,030,629	+				+0.4
5,030,629	+				-0.2
5,030,629	+				-0.3
5,030,629	+				+0.2
5,030,630	-				-0.2
5,030,630	-				+0.3
5,030,630	-				+0.5
5,030,630	-				+0.9
5,030,630	-				+0.3
5,030,630	-				-1.1
5,030,630	-				-0.6
5,030,633	+				-0.3
5,030,633	+				-0.7
5,030,633	+				-1.1
5,030,633	+				+0.1
5,030,633	+				+1.1
5,030,633	+				-0.4
5,030,633	+				-1.9
5,030,633	+				-1.0
5,030,633	+				+0.4
5,030,633	+				+0.6
5,030,633	+				-0.1
5,030,633	+				-0.2
5,030,633	+				+1.1
5,030,633	+				-0.8
5,030,633	+				-2.9
5,030,633	+				-0.3
5,030,633	+				-0.4
5,030,633	+				+1.2
5,030,633	+				-1.4
5,030,633	+				+1.5
5,030,633	+				+0.2
5,030,633	+				-0.6
5,030,633	+				+0.3
5,030,633	+				+0.9
5,030,634	-				-0.1
5,030,634	-				-2.4
5,030,634	-				-1.5
5,030,634	-				+0.1
5,030,634	-				-0.6
5,030,634	-				-1.3
5,030,634	-				-1.4
5,030,634	-				-1.5
5,030,634	-				+0.3
5,030,634	-				-0.3
5,030,634	-				+1.5
5,030,634	-				-0.1
5,030,634	-				+0.5
5,030,634	-				+0.5
5,030,634	-				+0.2
5,030,634	-				-1.5
5,030,634	-				+0.3
5,030,634	-				+0.3
5,030,634	-				-0.1
5,030,634	-				-0.5
5,030,635	+				+0.4
5,030,635	+				-2.0
5,030,635	+				+0.1
5,030,635	+				+0.1
5,030,635	+				+0.2
5,030,635	+				-0.1
5,030,635	+				-0.4
5,030,635	+				-0.3
5,030,635	+				-0.1
5,030,635	+				-0.9
5,030,636	-				-2.1
5,030,636	-				+0.3
5,030,636	-				-0.1
5,030,636	-				-2.4
5,030,636	-				-0.2
5,030,636	-				+1.3
5,030,636	-				+0.1
5,030,636	-				-0.5
5,030,636	-				+0.5
5,030,636	-				+0.0
5,030,636	-				-0.7
5,030,636	-				-0.1
5,030,672	+				+0.6
5,030,711	+				+0.5
5,030,711	+				+0.0
5,030,711	+				+0.3
5,030,711	+				+0.9
5,030,712	-				+0.1
5,030,762	+		PfGW456L13_4503	0.12	+0.8
5,030,762	+		PfGW456L13_4503	0.12	+0.0
5,030,762	+		PfGW456L13_4503	0.12	+0.1
5,030,762	+		PfGW456L13_4503	0.12	+0.9
5,030,762	+		PfGW456L13_4503	0.12	-0.5
5,030,762	+		PfGW456L13_4503	0.12	+0.4
5,030,762	+		PfGW456L13_4503	0.12	-1.6
5,030,763	-		PfGW456L13_4503	0.12	-0.2
5,030,763	-		PfGW456L13_4503	0.12	+0.5
5,030,838	+		PfGW456L13_4503	0.20	-0.9
5,030,839	-		PfGW456L13_4503	0.20	+0.3
5,030,895	+		PfGW456L13_4503	0.26	+0.9
5,030,896	-		PfGW456L13_4503	0.26	-0.5
5,030,896	-		PfGW456L13_4503	0.26	+2.1
5,030,958	+		PfGW456L13_4503	0.33	-0.8
5,030,959	-		PfGW456L13_4503	0.33	+0.5
5,030,959	-		PfGW456L13_4503	0.33	-1.3
5,031,009	+		PfGW456L13_4503	0.38	-0.1
5,031,009	+		PfGW456L13_4503	0.38	-0.7
5,031,009	+		PfGW456L13_4503	0.38	-0.3
5,031,009	+		PfGW456L13_4503	0.38	+0.4
5,031,010	-		PfGW456L13_4503	0.38	+0.3
5,031,010	-		PfGW456L13_4503	0.38	-0.4
5,031,031	+		PfGW456L13_4503	0.41	+0.9
5,031,031	+		PfGW456L13_4503	0.41	+0.1
5,031,031	+		PfGW456L13_4503	0.41	-1.7
5,031,032	-		PfGW456L13_4503	0.41	+0.3
5,031,169	-		PfGW456L13_4503	0.56	-2.2
5,031,411	-		PfGW456L13_4503	0.82	-0.5
5,031,534	-				+0.1
5,031,550	+				-0.1