Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2739

Experiment: D-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (C)
3,036,325	+		PfGW456L13_2738	0.11	-1.1
3,036,325	+		PfGW456L13_2738	0.11	+3.2
3,036,326	-		PfGW456L13_2738	0.11	+0.4
3,036,326	-		PfGW456L13_2738	0.11	-0.4
3,036,390	-		PfGW456L13_2738	0.17	-0.4
3,036,508	+		PfGW456L13_2738	0.29	-1.2
3,036,508	+		PfGW456L13_2738	0.29	-0.4
3,036,508	+		PfGW456L13_2738	0.29	-0.2
3,036,627	+		PfGW456L13_2738	0.40	+1.6
3,036,627	+		PfGW456L13_2738	0.40	-0.1
3,036,628	-		PfGW456L13_2738	0.41	-0.4
3,036,628	-		PfGW456L13_2738	0.41	-0.2
3,036,628	-		PfGW456L13_2738	0.41	-0.6
3,036,631	+		PfGW456L13_2738	0.41	+0.6
3,036,632	-		PfGW456L13_2738	0.41	-0.4
3,036,638	+		PfGW456L13_2738	0.41	+0.8
3,036,801	+		PfGW456L13_2738	0.57	-1.7
3,036,801	+		PfGW456L13_2738	0.57	+1.6
3,036,801	+		PfGW456L13_2738	0.57	-0.3
3,036,802	-		PfGW456L13_2738	0.57	-0.1
3,036,802	-		PfGW456L13_2738	0.57	-0.8
3,036,802	-		PfGW456L13_2738	0.57	+0.3
3,036,802	-		PfGW456L13_2738	0.57	+0.8
3,036,802	-		PfGW456L13_2738	0.57	-0.2
3,036,802	-		PfGW456L13_2738	0.57	+1.1
3,036,818	-		PfGW456L13_2738	0.59	-0.5
3,036,970	+		PfGW456L13_2738	0.74	+0.0
3,036,971	-		PfGW456L13_2738	0.74	+0.3
3,037,060	+		PfGW456L13_2738	0.82	-1.3
3,037,060	+		PfGW456L13_2738	0.82	+1.3
3,037,061	-		PfGW456L13_2738	0.82	+1.3
3,037,072	+		PfGW456L13_2738	0.84	+0.3
3,037,072	+		PfGW456L13_2738	0.84	-0.0
3,037,072	+		PfGW456L13_2738	0.84	-0.1
3,037,072	+		PfGW456L13_2738	0.84	+0.5
3,037,232	+				+0.1
3,037,232	+				-1.9
3,037,233	-				+0.1
3,037,233	-				-1.3
3,037,270	+				-0.1
3,037,271	-				+0.1
3,037,308	+				-0.4
3,037,308	+				+1.6
3,037,308	+				+0.1
3,037,308	+				-0.2
3,037,309	-		PfGW456L13_2739	0.10	-0.0
3,037,309	-		PfGW456L13_2739	0.10	-2.7
3,037,309	-		PfGW456L13_2739	0.10	+0.1
3,037,360	+		PfGW456L13_2739	0.20	-0.6
3,037,360	+		PfGW456L13_2739	0.20	+0.3
3,037,375	+		PfGW456L13_2739	0.24	-0.3
3,037,570	+		PfGW456L13_2739	0.63	-0.6
3,037,570	+		PfGW456L13_2739	0.63	-0.5
3,037,570	+		PfGW456L13_2739	0.63	+0.3
3,037,571	-		PfGW456L13_2739	0.64	-1.2
3,037,571	-		PfGW456L13_2739	0.64	+0.4
3,037,606	+		PfGW456L13_2739	0.71	+0.9
3,037,606	+		PfGW456L13_2739	0.71	-0.9
3,037,606	+		PfGW456L13_2739	0.71	-0.2
3,037,606	+		PfGW456L13_2739	0.71	+1.1
3,037,606	+		PfGW456L13_2739	0.71	+0.6
3,037,606	+		PfGW456L13_2739	0.71	+0.1
3,037,606	+		PfGW456L13_2739	0.71	-2.5
3,037,607	-		PfGW456L13_2739	0.71	-0.1
3,037,667	+		PfGW456L13_2739	0.83	+1.2
3,037,667	+		PfGW456L13_2739	0.83	+0.7
3,037,667	+		PfGW456L13_2739	0.83	+0.6
3,037,667	+		PfGW456L13_2739	0.83	-0.7
3,037,669	+		PfGW456L13_2739	0.84	+0.1
3,037,669	+		PfGW456L13_2739	0.84	-1.4
3,037,669	+		PfGW456L13_2739	0.84	-2.5
3,037,670	-		PfGW456L13_2739	0.84	-0.4
3,037,670	-		PfGW456L13_2739	0.84	+0.9
3,037,670	-		PfGW456L13_2739	0.84	+1.2
3,037,670	-		PfGW456L13_2739	0.84	-2.2
3,037,670	-		PfGW456L13_2739	0.84	-0.9
3,037,670	-		PfGW456L13_2739	0.84	+0.9
3,037,670	-		PfGW456L13_2739	0.84	+0.4
3,037,670	-		PfGW456L13_2739	0.84	+0.3
3,037,670	-		PfGW456L13_2739	0.84	+0.6
3,037,707	-				+0.5
3,037,732	+				-1.7
3,037,732	+				-2.4
3,037,733	-				+0.2
3,037,737	+				+0.3
3,037,737	+				-0.3
3,037,737	+				-0.4
3,037,737	+				-0.2
3,037,737	+				+0.2
3,037,737	+				+0.4
3,037,738	-				-0.5
3,037,738	-				-0.4
3,037,829	+				+0.9
3,037,829	+				-0.1
3,037,829	+				-0.4
3,037,830	-				+0.5
3,037,830	-				+0.0
3,037,830	-				-0.1
3,037,830	-				-0.9
3,037,864	+				-0.6
3,037,865	-				-0.1
3,038,140	-				+3.0
3,038,183	+		PfGW456L13_2740	0.31	-0.2
3,038,183	+		PfGW456L13_2740	0.31	-1.0
3,038,184	-		PfGW456L13_2740	0.31	+1.3
3,038,184	-		PfGW456L13_2740	0.31	+0.5
3,038,184	-		PfGW456L13_2740	0.31	+0.2
3,038,184	-				+0.6
3,038,184	-		PfGW456L13_2740	0.31	+0.1
3,038,237	+		PfGW456L13_2740	0.35	-0.2
3,038,237	+		PfGW456L13_2740	0.35	+0.6
3,038,238	-		PfGW456L13_2740	0.35	+0.8
3,038,292	+		PfGW456L13_2740	0.39	-1.3
3,038,292	+		PfGW456L13_2740	0.39	-0.2
3,038,438	-		PfGW456L13_2740	0.50	+1.5
3,038,438	-		PfGW456L13_2740	0.50	-0.2
3,038,450	+		PfGW456L13_2740	0.51	+0.1
3,038,450	+		PfGW456L13_2740	0.51	-0.9
3,038,450	+		PfGW456L13_2740	0.51	+0.6
3,038,450	+		PfGW456L13_2740	0.51	+0.6
3,038,450	+		PfGW456L13_2740	0.51	-0.5
3,038,451	-		PfGW456L13_2740	0.51	+0.3
3,038,451	-		PfGW456L13_2740	0.51	-0.3
3,038,451	-		PfGW456L13_2740	0.51	-2.2
3,038,451	-		PfGW456L13_2740	0.51	-0.4
3,038,451	-		PfGW456L13_2740	0.51	-1.1
3,038,451	-		PfGW456L13_2740	0.51	+0.8
3,038,451	-		PfGW456L13_2740	0.51	-1.1
3,038,451	-		PfGW456L13_2740	0.51	+0.5
3,038,456	+		PfGW456L13_2740	0.51	+0.6
3,038,456	+		PfGW456L13_2740	0.51	+1.3
3,038,456	+		PfGW456L13_2740	0.51	+0.1
3,038,456	+				-0.4
3,038,457	-		PfGW456L13_2740	0.51	-2.2
3,038,514	+		PfGW456L13_2740	0.55	+0.5
3,038,514	+		PfGW456L13_2740	0.55	+0.4
3,038,515	-		PfGW456L13_2740	0.55	+0.8
3,038,522	+		PfGW456L13_2740	0.56	+0.3
3,038,522	+		PfGW456L13_2740	0.56	+0.6
3,038,523	-		PfGW456L13_2740	0.56	-0.3
3,038,523	-		PfGW456L13_2740	0.56	-0.5
3,038,528	+		PfGW456L13_2740	0.56	+1.2
3,038,528	+		PfGW456L13_2740	0.56	-0.4
3,038,528	+		PfGW456L13_2740	0.56	+1.6
3,038,528	+		PfGW456L13_2740	0.56	-0.5
3,038,529	-		PfGW456L13_2740	0.56	-1.1
3,038,529	-		PfGW456L13_2740	0.56	-1.1
3,038,615	+		PfGW456L13_2740	0.62	-1.7
3,038,616	-		PfGW456L13_2740	0.62	+0.2
3,038,616	-		PfGW456L13_2740	0.62	-0.6
3,038,672	+		PfGW456L13_2740	0.67	+0.1
3,038,672	+		PfGW456L13_2740	0.67	+1.5
3,038,672	+		PfGW456L13_2740	0.67	-1.9
3,038,672	+		PfGW456L13_2740	0.67	-1.2
3,038,673	-		PfGW456L13_2740	0.67	+1.3