Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS26060

Experiment: D-Glucose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C); with MOPS
5,820,846	+		PFLU_RS26055	0.55	-1.5
5,820,846	+		PFLU_RS26055	0.55	-1.4
5,820,846	+		PFLU_RS26055	0.55	+0.5
5,820,846	+		PFLU_RS26055	0.55	+0.0
5,820,847	-		PFLU_RS26055	0.55	+0.5
5,820,901	+		PFLU_RS26055	0.61	-0.2
5,820,901	+		PFLU_RS26055	0.61	+0.7
5,820,901	+		PFLU_RS26055	0.61	-0.1
5,820,901	+		PFLU_RS26055	0.61	+0.1
5,820,901	+		PFLU_RS26055	0.61	+1.7
5,820,902	-		PFLU_RS26055	0.61	-0.4
5,820,902	-		PFLU_RS26055	0.61	+1.1
5,820,902	-		PFLU_RS26055	0.61	+0.4
5,820,922	+		PFLU_RS26055	0.64	+1.2
5,820,922	+		PFLU_RS26055	0.64	+0.6
5,820,923	-		PFLU_RS26055	0.64	-1.3
5,820,970	+		PFLU_RS26055	0.69	+0.3
5,820,970	+		PFLU_RS26055	0.69	-0.2
5,820,970	+		PFLU_RS26055	0.69	+0.1
5,820,970	+		PFLU_RS26055	0.69	+0.8
5,820,970	+		PFLU_RS26055	0.69	+0.1
5,820,970	+		PFLU_RS26055	0.69	+0.8
5,820,970	+		PFLU_RS26055	0.69	-0.1
5,820,970	+		PFLU_RS26055	0.69	+1.4
5,820,971	-		PFLU_RS26055	0.69	+0.2
5,820,971	-		PFLU_RS26055	0.69	+1.3
5,820,971	-		PFLU_RS26055	0.69	+1.0
5,820,971	-		PFLU_RS26055	0.69	-1.1
5,820,971	-		PFLU_RS26055	0.69	-2.4
5,820,971	-		PFLU_RS26055	0.69	-1.2
5,821,021	+		PFLU_RS26055	0.75	+0.9
5,821,097	+		PFLU_RS26055	0.84	+0.4
5,821,097	+		PFLU_RS26055	0.84	-0.1
5,821,097	+		PFLU_RS26055	0.84	-0.8
5,821,112	+		PFLU_RS26055	0.86	-0.9
5,821,112	+		PFLU_RS26055	0.86	+0.5
5,821,113	-		PFLU_RS26055	0.86	-0.5
5,821,113	-		PFLU_RS26055	0.86	+0.7
5,821,117	+		PFLU_RS26055	0.87	+0.1
5,821,117	+		PFLU_RS26055	0.87	-1.6
5,821,117	+		PFLU_RS26055	0.87	+2.1
5,821,117	+		PFLU_RS26055	0.87	+0.5
5,821,117	+		PFLU_RS26055	0.87	-2.1
5,821,117	+		PFLU_RS26055	0.87	+1.2
5,821,117	+		PFLU_RS26055	0.87	-0.5
5,821,118	-		PFLU_RS26055	0.87	-0.4
5,821,118	-		PFLU_RS26055	0.87	-0.4
5,821,118	-		PFLU_RS26055	0.87	+0.1
5,821,118	-		PFLU_RS26055	0.87	-0.1
5,821,118	-		PFLU_RS26055	0.87	+1.3
5,821,118	-		PFLU_RS26055	0.87	+1.3
5,821,118	-		PFLU_RS26055	0.87	+0.7
5,821,138	+		PFLU_RS26055	0.89	-1.0
5,821,138	+		PFLU_RS26055	0.89	-1.6
5,821,138	+		PFLU_RS26055	0.89	-0.2
5,821,138	+		PFLU_RS26055	0.89	+0.5
5,821,139	-		PFLU_RS26055	0.89	-0.3
5,821,139	-		PFLU_RS26055	0.89	+0.9
5,821,139	-		PFLU_RS26055	0.89	+1.6
5,821,139	-		PFLU_RS26055	0.89	-1.4
5,821,139	-		PFLU_RS26055	0.89	+0.6
5,821,139	-		PFLU_RS26055	0.89	+0.2
5,821,227	+				-1.9
5,821,237	+				-2.0
5,821,238	-				-0.5
5,821,238	-				+0.6
5,821,238	-				+0.7
5,821,261	+				-0.5
5,821,261	+				+0.7
5,821,261	+				-0.7
5,821,262	-				-0.2
5,821,262	-				+0.2
5,821,417	+		PFLU_RS31135	0.16	-0.3
5,821,417	+		PFLU_RS31135	0.16	-0.4
5,821,417	+		PFLU_RS31135	0.16	+1.4
5,821,417	+		PFLU_RS31135	0.16	-0.5
5,821,417	+		PFLU_RS31135	0.16	+0.0
5,821,418	-		PFLU_RS31135	0.16	-1.1
5,821,418	-		PFLU_RS31135	0.16	-0.3
5,821,450	+		PFLU_RS31135	0.25	-1.0
5,821,450	+		PFLU_RS31135	0.25	-1.3
5,821,450	+		PFLU_RS31135	0.25	+0.5
5,821,451	-		PFLU_RS31135	0.26	+0.1
5,821,454	-		PFLU_RS31135	0.27	-1.1
5,821,454	-		PFLU_RS31135	0.27	+0.9
5,821,454	-		PFLU_RS31135	0.27	+0.8
5,821,454	-		PFLU_RS31135	0.27	-2.3
5,821,476	+		PFLU_RS31135	0.33	-1.1
5,821,476	+		PFLU_RS31135	0.33	+0.9
5,821,476	+		PFLU_RS31135	0.33	-0.7
5,821,476	+		PFLU_RS31135	0.33	-0.4
5,821,476	+		PFLU_RS31135	0.33	-0.5
5,821,476	+		PFLU_RS31135	0.33	-0.0
5,821,477	-		PFLU_RS31135	0.33	-0.6
5,821,480	+		PFLU_RS31135	0.34	+0.4
5,821,481	-		PFLU_RS31135	0.34	-0.8
5,821,525	+		PFLU_RS31135	0.47	+1.3
5,821,526	-		PFLU_RS31135	0.47	+0.6
5,821,526	-		PFLU_RS31135	0.47	-1.6
5,821,526	-		PFLU_RS31135	0.47	+2.0
5,821,575	+		PFLU_RS31135	0.61	+0.3
5,821,575	+		PFLU_RS31135	0.61	-2.2
5,821,575	+		PFLU_RS31135	0.61	-0.9
5,821,576	-		PFLU_RS31135	0.61	-1.6
5,821,645	+		PFLU_RS31135	0.81	+0.3
5,821,645	+		PFLU_RS31135	0.81	+0.7
5,821,645	+		PFLU_RS31135	0.81	-1.1
5,821,645	+		PFLU_RS31135	0.81	+1.4
5,821,645	+		PFLU_RS31135	0.81	-0.6
5,821,645	+		PFLU_RS31135	0.81	+1.5
5,821,646	-		PFLU_RS31135	0.81	+0.0
5,821,646	-		PFLU_RS31135	0.81	-0.3
5,821,646	-		PFLU_RS31135	0.81	+1.9
5,821,646	-		PFLU_RS31135	0.81	-1.3
5,821,670	+		PFLU_RS31135	0.88	+0.3
5,821,670	+		PFLU_RS31135	0.88	+0.7
5,821,670	+		PFLU_RS31135	0.88	-0.1
5,821,670	+		PFLU_RS31135	0.88	+1.2
5,821,670	+		PFLU_RS31135	0.88	+1.8
5,821,670	+		PFLU_RS31135	0.88	-1.8
5,821,671	-		PFLU_RS31135	0.88	+1.2
5,821,671	-		PFLU_RS31135	0.88	-0.9
5,821,671	-		PFLU_RS31135	0.88	-1.2
5,821,671	-		PFLU_RS31135	0.88	-0.2
5,821,704	+				-0.8
5,821,704	+				+2.5
5,821,733	+				-0.4
5,821,734	-				+0.2
5,821,734	-				-1.4
5,821,734	-				-2.1
5,821,757	+				+0.9
5,821,757	+				-1.6
5,821,757	+				+0.0
5,821,757	+				+0.1
5,821,757	+				-2.1
5,821,757	+				-1.5
5,821,757	+				+0.2
5,821,758	-				+0.1
5,821,758	-				-0.1
5,821,758	-				-0.1
5,821,758	-				+0.2
5,821,758	-				-0.1
5,821,758	-				+0.5
5,821,758	-				+1.1
5,821,761	+				+0.5
5,821,761	+				-0.2
5,821,762	-				-0.3
5,821,762	-				-0.3
5,821,762	-				+0.1
5,821,762	-				+1.0
5,821,762	-				+0.2
5,821,768	+				+0.2
5,821,769	-				+0.2
5,821,769	-				-1.4
5,821,820	+				-0.3
5,821,820	+				+0.5
5,821,820	+				-0.3
5,821,827	+				+0.0
5,821,828	-				-0.0
5,821,828	-				+0.7
5,821,828	-				+0.3
5,821,828	-				+0.1
5,821,833	+				-0.4
5,821,834	-				+0.0
5,821,834	-				-0.2
5,821,834	-				-1.0
5,821,848	+				-0.9
5,821,891	+				-0.4
5,821,892	-				+0.9
5,821,892	-				-1.2
5,821,921	+				+0.2
5,821,922	-				-2.1
5,821,922	-				+0.5
5,821,922	-				+0.7
5,821,958	-				-1.7
5,822,042	+		PFLU_RS26060	0.14	-0.0
5,822,043	-		PFLU_RS26060	0.14	+0.5
5,822,043	-		PFLU_RS26060	0.14	-1.8
5,822,102	-		PFLU_RS26060	0.17	-0.1
5,822,191	+		PFLU_RS26060	0.23	+0.3
5,822,228	+		PFLU_RS26060	0.26	-0.4
5,822,228	+		PFLU_RS26060	0.26	+0.4
5,822,229	-		PFLU_RS26060	0.26	+1.1
5,822,232	+		PFLU_RS26060	0.26	-0.3
5,822,232	+		PFLU_RS26060	0.26	+0.7
5,822,232	+		PFLU_RS26060	0.26	-0.3
5,822,232	+		PFLU_RS26060	0.26	+0.2
5,822,232	+		PFLU_RS26060	0.26	-1.0
5,822,232	+		PFLU_RS26060	0.26	-0.8
5,822,232	+		PFLU_RS26060	0.26	-0.4
5,822,232	+		PFLU_RS26060	0.26	+0.9
5,822,232	+		PFLU_RS26060	0.26	+0.2
5,822,233	-		PFLU_RS26060	0.26	-1.0
5,822,233	-		PFLU_RS26060	0.26	+0.1
5,822,233	-		PFLU_RS26060	0.26	+1.4
5,822,233	-		PFLU_RS26060	0.26	+1.8
5,822,233	-		PFLU_RS26060	0.26	-0.5
5,822,233	-		PFLU_RS26060	0.26	-0.0
5,822,233	-		PFLU_RS26060	0.26	+0.8
5,822,236	-		PFLU_RS26060	0.26	+0.3
5,822,236	-		PFLU_RS26060	0.26	-1.2
5,822,272	+		PFLU_RS26060	0.28	+1.1
5,822,273	-		PFLU_RS26060	0.28	-1.8
5,822,273	-		PFLU_RS26060	0.28	-0.0
5,822,321	+		PFLU_RS26060	0.31	-0.4
5,822,321	+		PFLU_RS26060	0.31	+1.4
5,822,321	+		PFLU_RS26060	0.31	+0.7
5,822,322	-		PFLU_RS26060	0.32	+0.9
5,822,322	-		PFLU_RS26060	0.32	-1.3
5,822,322	-		PFLU_RS26060	0.32	+0.0
5,822,322	-		PFLU_RS26060	0.32	-1.6
5,822,322	-		PFLU_RS26060	0.32	-0.7
5,822,328	-		PFLU_RS26060	0.32	+0.7
5,822,349	-		PFLU_RS26060	0.33	-1.0
5,822,364	+		PFLU_RS26060	0.34	-0.2
5,822,364	+		PFLU_RS26060	0.34	-1.4
5,822,365	-		PFLU_RS26060	0.34	-1.3
5,822,365	-		PFLU_RS26060	0.34	-1.4
5,822,365	-		PFLU_RS26060	0.34	+1.2
5,822,408	+		PFLU_RS26060	0.37	+0.1
5,822,454	+		PFLU_RS26060	0.40	-1.8
5,822,455	-		PFLU_RS26060	0.40	+0.5
5,822,497	+		PFLU_RS26060	0.43	-0.2
5,822,498	-		PFLU_RS26060	0.43	+0.2
5,822,498	-		PFLU_RS26060	0.43	+0.1
5,822,576	+		PFLU_RS26060	0.48	-0.3
5,822,576	+		PFLU_RS26060	0.48	+0.4
5,822,576	+		PFLU_RS26060	0.48	+0.0
5,822,577	-		PFLU_RS26060	0.48	+1.2
5,822,630	-		PFLU_RS26060	0.51	+2.2
5,822,670	+		PFLU_RS26060	0.54	-0.1
5,822,671	-		PFLU_RS26060	0.54	-2.9
5,822,671	-		PFLU_RS26060	0.54	+0.5
5,822,736	-		PFLU_RS26060	0.58	+2.6
5,822,747	+		PFLU_RS26060	0.59	-0.9
5,822,747	+		PFLU_RS26060	0.59	-1.0
5,822,747	+		PFLU_RS26060	0.59	-0.1
5,822,747	+		PFLU_RS26060	0.59	+1.3
5,822,747	+		PFLU_RS26060	0.59	-0.6
5,822,747	+		PFLU_RS26060	0.59	+1.0
5,822,747	+		PFLU_RS26060	0.59	-0.8
5,822,747	+		PFLU_RS26060	0.59	+2.2
5,822,747	+		PFLU_RS26060	0.59	+0.5
5,822,748	-		PFLU_RS26060	0.59	+0.7
5,822,748	-		PFLU_RS26060	0.59	+1.1
5,822,748	-		PFLU_RS26060	0.59	-1.2
5,822,748	-		PFLU_RS26060	0.59	+0.1
5,822,748	-		PFLU_RS26060	0.59	+1.0
5,822,748	-		PFLU_RS26060	0.59	+0.4
5,822,748	-		PFLU_RS26060	0.59	+0.4
5,822,748	-		PFLU_RS26060	0.59	+0.1
5,822,748	-		PFLU_RS26060	0.59	+1.4
5,822,748	-		PFLU_RS26060	0.59	+0.6
5,822,748	-		PFLU_RS26060	0.59	-0.3
5,822,748	-		PFLU_RS26060	0.59	-0.5
5,822,751	-		PFLU_RS26060	0.59	+0.5
5,822,751	-		PFLU_RS26060	0.59	+0.9
5,822,751	-		PFLU_RS26060	0.59	+0.0
5,822,751	-		PFLU_RS26060	0.59	+1.8
5,822,788	+		PFLU_RS26060	0.61	+0.7
5,822,789	-		PFLU_RS26060	0.61	-1.3
5,822,831	+		PFLU_RS26060	0.64	+0.9
5,822,831	+		PFLU_RS26060	0.64	-0.8
5,822,832	-		PFLU_RS26060	0.64	+0.1
5,822,833	+		PFLU_RS26060	0.64	+0.1
5,822,834	-		PFLU_RS26060	0.64	+1.6
5,822,848	+		PFLU_RS26060	0.65	-1.0
5,822,849	-		PFLU_RS26060	0.65	+0.4
5,822,902	+		PFLU_RS26060	0.69	+1.8
5,822,902	+		PFLU_RS26060	0.69	-2.8
5,822,902	+		PFLU_RS26060	0.69	-0.7
5,822,904	+		PFLU_RS26060	0.69	+0.5
5,822,904	+		PFLU_RS26060	0.69	-1.0
5,822,904	+		PFLU_RS26060	0.69	+0.2
5,822,904	+		PFLU_RS26060	0.69	-0.2
5,822,904	+		PFLU_RS26060	0.69	+0.1
5,822,904	+		PFLU_RS26060	0.69	-2.1
5,822,904	+		PFLU_RS26060	0.69	+1.1
5,822,904	+		PFLU_RS26060	0.69	-1.5
5,822,904	+		PFLU_RS26060	0.69	-0.3
5,822,904	+		PFLU_RS26060	0.69	+0.1
5,822,904	+		PFLU_RS26060	0.69	-0.6
5,822,904	+		PFLU_RS26060	0.69	+1.4
5,822,904	+		PFLU_RS26060	0.69	+0.6
5,822,904	+		PFLU_RS26060	0.69	+0.3
5,822,904	+		PFLU_RS26060	0.69	-0.5
5,822,904	+		PFLU_RS26060	0.69	+1.5
5,822,904	+		PFLU_RS26060	0.69	-0.2
5,822,904	+		PFLU_RS26060	0.69	+0.3
5,822,904	+		PFLU_RS26060	0.69	-0.6
5,822,904	+		PFLU_RS26060	0.69	-0.8
5,822,905	-		PFLU_RS26060	0.69	-0.6
5,822,905	-		PFLU_RS26060	0.69	-0.7
5,822,905	-		PFLU_RS26060	0.69	+0.6
5,822,905	-		PFLU_RS26060	0.69	+0.3
5,822,905	-		PFLU_RS26060	0.69	-0.0
5,822,905	-		PFLU_RS26060	0.69	+0.6
5,822,905	-		PFLU_RS26060	0.69	+0.9
5,822,905	-		PFLU_RS26060	0.69	-1.2
5,822,905	-		PFLU_RS26060	0.69	+1.0
5,822,905	-		PFLU_RS26060	0.69	-0.1
5,822,905	-		PFLU_RS26060	0.69	-1.1
5,822,905	-		PFLU_RS26060	0.69	-1.0
5,822,905	-		PFLU_RS26060	0.69	+0.8
5,822,905	-		PFLU_RS26060	0.69	-0.5
5,822,905	-		PFLU_RS26060	0.69	+0.9
5,822,905	-		PFLU_RS26060	0.69	-0.5
5,822,905	-		PFLU_RS26060	0.69	+0.2
5,822,905	-		PFLU_RS26060	0.69	-1.8
5,822,905	-		PFLU_RS26060	0.69	+1.5
5,822,931	+		PFLU_RS26060	0.70	-0.4
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5,822,935	+		PFLU_RS26060	0.71	+1.1
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5,822,945	+		PFLU_RS26060	0.71	+0.0
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5,824,392	+				+0.4
5,824,392	+				+1.7