Experiment: D-Glucose (C); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS20740 and PFLU_RS20745 overlap by 1 nucleotides PFLU_RS20745 and PFLU_RS20750 are separated by 65 nucleotides PFLU_RS20750 and PFLU_RS20755 are separated by 183 nucleotides PFLU_RS20755 and PFLU_RS20760 are separated by 106 nucleotides
PFLU_RS20740: PFLU_RS20740 - alpha/beta hydrolase fold domain-containing protein, at 4,668,113 to 4,669,039
_RS20740
PFLU_RS20745: PFLU_RS20745 - tryptophan-rich sensory protein, at 4,669,039 to 4,669,479
_RS20745
PFLU_RS20750: PFLU_RS20750 - nucleotidyltransferase family protein, at 4,669,545 to 4,670,105
_RS20750
PFLU_RS20755: PFLU_RS20755 - hypothetical protein, at 4,670,289 to 4,670,522
_RS20755
PFLU_RS20760: PFLU_RS20760 - hypothetical protein, at 4,670,629 to 4,671,570
_RS20760
Position (kb) 4669
4670
4671 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4668.662 kb on - strand, within PFLU_RS20740 at 4668.952 kb on + strand at 4669.032 kb on + strand at 4669.032 kb on + strand at 4669.032 kb on + strand at 4669.032 kb on + strand at 4669.033 kb on - strand at 4669.101 kb on - strand, within PFLU_RS20745 at 4669.204 kb on + strand, within PFLU_RS20745 at 4669.205 kb on - strand, within PFLU_RS20745 at 4669.242 kb on + strand, within PFLU_RS20745 at 4669.242 kb on + strand, within PFLU_RS20745 at 4669.242 kb on + strand, within PFLU_RS20745 at 4669.243 kb on - strand, within PFLU_RS20745 at 4669.243 kb on - strand, within PFLU_RS20745 at 4669.243 kb on - strand, within PFLU_RS20745 at 4669.243 kb on - strand, within PFLU_RS20745 at 4669.330 kb on + strand, within PFLU_RS20745 at 4669.330 kb on + strand, within PFLU_RS20745 at 4669.330 kb on + strand, within PFLU_RS20745 at 4669.330 kb on + strand, within PFLU_RS20745 at 4669.330 kb on + strand, within PFLU_RS20745 at 4669.330 kb on + strand, within PFLU_RS20745 at 4669.331 kb on - strand, within PFLU_RS20745 at 4669.331 kb on - strand, within PFLU_RS20745 at 4669.331 kb on - strand, within PFLU_RS20745 at 4669.331 kb on - strand, within PFLU_RS20745 at 4669.334 kb on + strand, within PFLU_RS20745 at 4669.334 kb on + strand, within PFLU_RS20745 at 4669.334 kb on + strand, within PFLU_RS20745 at 4669.334 kb on + strand, within PFLU_RS20745 at 4669.334 kb on + strand, within PFLU_RS20745 at 4669.334 kb on + strand, within PFLU_RS20745 at 4669.334 kb on + strand, within PFLU_RS20745 at 4669.334 kb on + strand, within PFLU_RS20745 at 4669.334 kb on + strand, within PFLU_RS20745 at 4669.335 kb on - strand, within PFLU_RS20745 at 4669.335 kb on - strand, within PFLU_RS20745 at 4669.335 kb on - strand, within PFLU_RS20745 at 4669.335 kb on - strand, within PFLU_RS20745 at 4669.335 kb on - strand, within PFLU_RS20745 at 4669.335 kb on - strand, within PFLU_RS20745 at 4669.335 kb on - strand, within PFLU_RS20745 at 4669.335 kb on - strand, within PFLU_RS20745 at 4669.335 kb on - strand, within PFLU_RS20745 at 4669.585 kb on + strand at 4669.586 kb on - strand at 4669.586 kb on - strand at 4669.586 kb on - strand at 4669.635 kb on - strand, within PFLU_RS20750 at 4669.673 kb on - strand, within PFLU_RS20750 at 4669.681 kb on + strand, within PFLU_RS20750 at 4669.681 kb on + strand, within PFLU_RS20750 at 4669.681 kb on + strand, within PFLU_RS20750 at 4669.681 kb on + strand, within PFLU_RS20750 at 4669.681 kb on + strand, within PFLU_RS20750 at 4669.681 kb on + strand, within PFLU_RS20750 at 4669.682 kb on - strand, within PFLU_RS20750 at 4669.682 kb on - strand, within PFLU_RS20750 at 4669.719 kb on - strand, within PFLU_RS20750 at 4669.732 kb on + strand, within PFLU_RS20750 at 4669.795 kb on + strand, within PFLU_RS20750 at 4669.894 kb on + strand, within PFLU_RS20750 at 4669.895 kb on - strand, within PFLU_RS20750 at 4669.895 kb on - strand, within PFLU_RS20750 at 4669.915 kb on + strand, within PFLU_RS20750 at 4669.916 kb on - strand, within PFLU_RS20750 at 4669.916 kb on - strand, within PFLU_RS20750 at 4669.927 kb on + strand, within PFLU_RS20750 at 4669.928 kb on - strand, within PFLU_RS20750 at 4669.928 kb on - strand, within PFLU_RS20750 at 4670.124 kb on + strand at 4670.208 kb on - strand at 4670.332 kb on + strand, within PFLU_RS20755 at 4670.332 kb on + strand, within PFLU_RS20755 at 4670.333 kb on - strand, within PFLU_RS20755 at 4670.341 kb on + strand, within PFLU_RS20755 at 4670.341 kb on + strand, within PFLU_RS20755 at 4670.341 kb on + strand, within PFLU_RS20755 at 4670.341 kb on + strand, within PFLU_RS20755 at 4670.341 kb on + strand, within PFLU_RS20755 at 4670.341 kb on + strand, within PFLU_RS20755 at 4670.341 kb on + strand, within PFLU_RS20755 at 4670.341 kb on + strand, within PFLU_RS20755 at 4670.341 kb on + strand, within PFLU_RS20755 at 4670.341 kb on + strand, within PFLU_RS20755 at 4670.341 kb on + strand, within PFLU_RS20755 at 4670.342 kb on - strand, within PFLU_RS20755 at 4670.342 kb on - strand, within PFLU_RS20755 at 4670.342 kb on - strand, within PFLU_RS20755 at 4670.342 kb on - strand, within PFLU_RS20755 at 4670.342 kb on - strand, within PFLU_RS20755 at 4670.342 kb on - strand, within PFLU_RS20755 at 4670.342 kb on - strand, within PFLU_RS20755 at 4670.342 kb on - strand, within PFLU_RS20755 at 4670.487 kb on + strand, within PFLU_RS20755 at 4670.488 kb on - strand, within PFLU_RS20755 at 4670.488 kb on - strand, within PFLU_RS20755 at 4670.488 kb on - strand, within PFLU_RS20755 at 4670.534 kb on + strand at 4670.534 kb on + strand at 4670.535 kb on - strand at 4670.535 kb on - strand at 4670.535 kb on - strand at 4670.584 kb on + strand at 4670.585 kb on - strand at 4670.585 kb on - strand at 4670.585 kb on - strand at 4670.585 kb on - strand at 4670.687 kb on + strand at 4670.688 kb on - strand at 4670.688 kb on - strand at 4670.688 kb on - strand at 4670.688 kb on - strand at 4670.759 kb on + strand, within PFLU_RS20760 at 4670.760 kb on - strand, within PFLU_RS20760 at 4670.760 kb on - strand, within PFLU_RS20760 at 4670.760 kb on - strand, within PFLU_RS20760 at 4670.985 kb on + strand, within PFLU_RS20760 at 4670.985 kb on + strand, within PFLU_RS20760 at 4670.985 kb on + strand, within PFLU_RS20760 at 4670.985 kb on + strand, within PFLU_RS20760 at 4670.986 kb on - strand, within PFLU_RS20760 at 4670.986 kb on - strand, within PFLU_RS20760 at 4670.986 kb on - strand, within PFLU_RS20760 at 4670.986 kb on - strand, within PFLU_RS20760 at 4670.986 kb on - strand, within PFLU_RS20760 at 4670.987 kb on + strand, within PFLU_RS20760 at 4670.987 kb on + strand, within PFLU_RS20760 at 4670.987 kb on + strand, within PFLU_RS20760 at 4670.988 kb on - strand, within PFLU_RS20760
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); with MOPS remove 4,668,662 - PFLU_RS20740 0.59 +0.9 4,668,952 + +0.5 4,669,032 + -1.0 4,669,032 + +1.0 4,669,032 + -1.5 4,669,032 + -0.6 4,669,033 - +1.3 4,669,101 - PFLU_RS20745 0.14 +0.8 4,669,204 + PFLU_RS20745 0.37 -0.3 4,669,205 - PFLU_RS20745 0.38 +1.7 4,669,242 + PFLU_RS20745 0.46 -1.3 4,669,242 + PFLU_RS20745 0.46 -1.4 4,669,242 + PFLU_RS20745 0.46 +0.4 4,669,243 - PFLU_RS20745 0.46 -0.4 4,669,243 - PFLU_RS20745 0.46 -1.2 4,669,243 - PFLU_RS20745 0.46 +1.0 4,669,243 - PFLU_RS20745 0.46 +0.5 4,669,330 + PFLU_RS20745 0.66 -0.5 4,669,330 + PFLU_RS20745 0.66 +0.2 4,669,330 + PFLU_RS20745 0.66 +0.2 4,669,330 + PFLU_RS20745 0.66 +2.1 4,669,330 + PFLU_RS20745 0.66 -0.3 4,669,330 + PFLU_RS20745 0.66 -1.8 4,669,331 - PFLU_RS20745 0.66 -1.8 4,669,331 - PFLU_RS20745 0.66 +0.2 4,669,331 - PFLU_RS20745 0.66 -0.2 4,669,331 - PFLU_RS20745 0.66 -0.3 4,669,334 + PFLU_RS20745 0.67 -1.5 4,669,334 + PFLU_RS20745 0.67 -0.1 4,669,334 + PFLU_RS20745 0.67 +0.5 4,669,334 + PFLU_RS20745 0.67 +0.1 4,669,334 + PFLU_RS20745 0.67 -0.8 4,669,334 + PFLU_RS20745 0.67 -2.7 4,669,334 + PFLU_RS20745 0.67 -1.3 4,669,334 + PFLU_RS20745 0.67 -0.4 4,669,334 + PFLU_RS20745 0.67 -0.5 4,669,335 - PFLU_RS20745 0.67 -0.3 4,669,335 - PFLU_RS20745 0.67 +0.9 4,669,335 - PFLU_RS20745 0.67 +0.7 4,669,335 - PFLU_RS20745 0.67 +0.6 4,669,335 - PFLU_RS20745 0.67 +0.2 4,669,335 - PFLU_RS20745 0.67 +1.3 4,669,335 - PFLU_RS20745 0.67 +1.3 4,669,335 - PFLU_RS20745 0.67 +1.9 4,669,335 - PFLU_RS20745 0.67 +0.1 4,669,585 + -0.5 4,669,586 - +0.4 4,669,586 - +0.6 4,669,586 - +1.3 4,669,635 - PFLU_RS20750 0.16 +1.3 4,669,673 - PFLU_RS20750 0.23 +0.0 4,669,681 + PFLU_RS20750 0.24 -1.2 4,669,681 + PFLU_RS20750 0.24 -1.1 4,669,681 + PFLU_RS20750 0.24 -1.7 4,669,681 + PFLU_RS20750 0.24 +0.1 4,669,681 + PFLU_RS20750 0.24 -0.9 4,669,681 + PFLU_RS20750 0.24 -0.7 4,669,682 - PFLU_RS20750 0.24 -2.8 4,669,682 - PFLU_RS20750 0.24 +1.4 4,669,719 - PFLU_RS20750 0.31 +1.4 4,669,732 + PFLU_RS20750 0.33 -2.5 4,669,795 + PFLU_RS20750 0.45 -1.3 4,669,894 + PFLU_RS20750 0.62 -0.8 4,669,895 - PFLU_RS20750 0.62 -0.5 4,669,895 - PFLU_RS20750 0.62 -0.7 4,669,915 + PFLU_RS20750 0.66 +0.1 4,669,916 - PFLU_RS20750 0.66 -0.3 4,669,916 - PFLU_RS20750 0.66 +1.1 4,669,927 + PFLU_RS20750 0.68 +0.4 4,669,928 - PFLU_RS20750 0.68 +0.4 4,669,928 - PFLU_RS20750 0.68 -0.8 4,670,124 + -2.5 4,670,208 - -1.1 4,670,332 + PFLU_RS20755 0.18 +0.0 4,670,332 + PFLU_RS20755 0.18 -0.8 4,670,333 - PFLU_RS20755 0.19 -0.4 4,670,341 + PFLU_RS20755 0.22 -0.5 4,670,341 + PFLU_RS20755 0.22 -0.6 4,670,341 + PFLU_RS20755 0.22 +0.6 4,670,341 + PFLU_RS20755 0.22 +0.7 4,670,341 + PFLU_RS20755 0.22 +0.9 4,670,341 + PFLU_RS20755 0.22 +1.3 4,670,341 + PFLU_RS20755 0.22 -0.0 4,670,341 + PFLU_RS20755 0.22 +1.1 4,670,341 + PFLU_RS20755 0.22 -0.1 4,670,341 + PFLU_RS20755 0.22 -1.3 4,670,341 + PFLU_RS20755 0.22 -2.4 4,670,342 - PFLU_RS20755 0.23 -0.5 4,670,342 - PFLU_RS20755 0.23 +0.6 4,670,342 - PFLU_RS20755 0.23 +1.2 4,670,342 - PFLU_RS20755 0.23 -0.9 4,670,342 - PFLU_RS20755 0.23 -1.3 4,670,342 - PFLU_RS20755 0.23 -0.0 4,670,342 - PFLU_RS20755 0.23 -1.2 4,670,342 - PFLU_RS20755 0.23 -0.4 4,670,487 + PFLU_RS20755 0.85 +0.6 4,670,488 - PFLU_RS20755 0.85 +2.1 4,670,488 - PFLU_RS20755 0.85 -1.8 4,670,488 - PFLU_RS20755 0.85 -0.0 4,670,534 + -1.1 4,670,534 + -0.1 4,670,535 - -1.5 4,670,535 - +1.5 4,670,535 - +0.2 4,670,584 + +1.1 4,670,585 - -0.6 4,670,585 - +1.2 4,670,585 - -1.0 4,670,585 - -1.3 4,670,687 + -0.5 4,670,688 - +0.1 4,670,688 - -2.5 4,670,688 - +0.1 4,670,688 - -1.9 4,670,759 + PFLU_RS20760 0.14 -0.8 4,670,760 - PFLU_RS20760 0.14 -0.6 4,670,760 - PFLU_RS20760 0.14 -1.8 4,670,760 - PFLU_RS20760 0.14 -1.6 4,670,985 + PFLU_RS20760 0.38 +0.1 4,670,985 + PFLU_RS20760 0.38 -2.1 4,670,985 + PFLU_RS20760 0.38 +0.3 4,670,985 + PFLU_RS20760 0.38 +0.3 4,670,986 - PFLU_RS20760 0.38 +0.5 4,670,986 - PFLU_RS20760 0.38 -1.1 4,670,986 - PFLU_RS20760 0.38 +1.1 4,670,986 - PFLU_RS20760 0.38 +0.3 4,670,986 - PFLU_RS20760 0.38 +0.5 4,670,987 + PFLU_RS20760 0.38 +0.4 4,670,987 + PFLU_RS20760 0.38 +1.4 4,670,987 + PFLU_RS20760 0.38 -0.5 4,670,988 - PFLU_RS20760 0.38 -2.8
Or see this region's nucleotide sequence